Array 1 1195048-1195876 **** Predicted by CRISPRDetect 2.4 *** >NC_007517.1 Geobacter metallireducens GS-15, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1195048 37 100.0 35 ..................................... ACTATGCGCTCCACTTTGGCCCTGATGTTGGCCGT 1195120 37 100.0 39 ..................................... CGCCAAATCCGCCGCGCTCCACTCCCGGCAGAAGTTGTC 1195196 37 100.0 34 ..................................... CAAGTCCGACTTGAAGATTTGTACTGTCGGCGCC 1195267 37 100.0 34 ..................................... ACCATCACCCCAGGGATCGGCACGGCCCGCATCG 1195338 37 100.0 41 ..................................... TTGGTGCCCCAGGAAGAGTGGAAACCGCTGATCAGCGTCCG 1195416 37 100.0 34 ..................................... TCGACCAACACCCCCGGCACGGTCATGTCGAAGG 1195487 37 100.0 34 ..................................... GACACCGGCCTCGACGGGTGGGACGCCGCCGCCT 1195558 37 100.0 34 ..................................... GGGAGGGACGGTGATATCGTGCAGGGAATACCAA 1195629 37 100.0 34 ..................................... ACCTGATGCTGCCCCTGCGGTCTGCCGTGCGCGG 1195700 37 94.6 33 ...............GC.................... AGGTCATTGGACCGGGCGAAGATGCGGCCCTGA 1195770 37 94.6 33 ...............GC.................... GGAATCAGTTCGCCGCGTTTTGTCCGAAGGTTA 1195840 37 94.6 0 ...............GC.................... | ========== ====== ====== ====== ===================================== ========================================= ================== 12 37 98.6 35 GTAGCGCCCGCCTACATAGGCGGGCGAGGATTGAAAC # Left flank : TTTATGAAAGGGGGATAGAGGGGGATTTGATGTGGGTAGTTGTCTGCTATGACGTGAACACCGAAACCAGAGAGGGTCGCCGGCGACTGCGACGGGTGGCCCAGGCGTGCAAGAACTATGGCCAGCGGGTCCAGAAGTCGGTGTTTGAATGTCAGGTCAATGAGATGAAGTTTGAGGATCTGCGGCGAAAATTGCTTCGGGAAATCAACAAGGAACAGGACAACCTCCGCTTCTATCGCCTGACAGAGCCCCGGGAGAACCATGTGGAAACCCATGGACTCACGCGAACGATCTTCTTTGATGATGAGCCGTTGATCGTTTGAGCCGCGAACCTGGTGTTCCTTCAGAAACACGGGATGTTCGCGGACGGGTAACACGGTGACATTTCGAGGGATAAGGAGGGTGAGGGATTTTAGGGAATACCTTAGCGGCCTTTTTCTGCCGGATTCGCGGAAATGGGCATGCAACTGTTTGAAAACTGTCACTAAAAAGATGTGGCA # Right flank : CACACAGCCTCTCAATATACCGATATCTCCTATTTGTAGCGTCCGCCTACGTAGGCCGGTGAAGCAACAGAGGGTGAGGTTACGGGCTACCGGAAGATGATTCCCCCAATGCAGACACAACAGAGGGCAACGAAAAACATGAGCACCGAAACGACGGCAATGGCTTTGGCCAGCATGGGAATGACCTCATAACATTTTTCTTAGTTAATCGGTGCGTAACAGCAAAACTTTAATTTATTTTACGTGTAGTTAGCCAGCTGGCGAGGAGGATGGAGATGGAGGTTCTGGAGGCAATCTACGGACGCCGCAGCGTGCGGCAGTATACCAGCGAGCCGGTGACGCGGGAGGAAGTTCTGGAGATCGTCCAGGCAGGTTCCTGGGCGCCGTCGGGGCTCAACAATCAGCCGTGGCGGTTTGCCATTGTGTCCGACGACGAAAAGCGCCGGGCGCTGGCGGGGTTTACGAAGTACCGGCACATCCTGGAAGGGGCGCCGGTCTCC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCGCCTACATAGGCGGGCGAGGATTGAAAC # Alternate repeat : GTAGCGCCCGCCTACGCAGGCGGGCGAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-17.30,-17.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA //