Array 1 33978-37255 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJKY010000018.1 Phocea massiliensis strain An559 An559_contig-110_17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 33978 32 100.0 35 ................................ GTAAAATTTACGATTGGAACGAATCCGTTGTAAAG 34045 32 100.0 36 ................................ ACAAAGTTTTGGTTTATATGACGAAAATAAAATAAG 34113 32 100.0 35 ................................ ATCGCCTTGTTTGCGCCGTCCAGCACCGGCAGCCG 34180 32 100.0 35 ................................ CTTTTGATACAGCCGCGCCGCGATCACCTGCCGAG 34247 32 100.0 35 ................................ TTTGCTAACAGTTTGTGCAGCATTTGTTACACTAG 34314 32 100.0 37 ................................ AATTACAATTCCAGATTCAATAGCTTGCTTTATAGCG 34383 32 100.0 35 ................................ GCCTTCGCTGTGAATCAGTGCTTTCAGATCGCCGG 34450 32 100.0 36 ................................ CTTTTGATACAGCCGCGCCGCGATCACCTGCCGAAG 34518 32 100.0 36 ................................ ACATACACACTCAAACATCGCGCCCTTGCTTGCATG 34586 32 100.0 36 ................................ ACCTCAGGTTTCGACGGCTCGACATACAGTCTCCAG 34654 32 100.0 37 ................................ CGGACAAATCGTGGAAGGTTACGCGATCGGTTTAAAG 34723 32 100.0 36 ................................ GTTTTGTGCCTGCTGCCAGTCGGACACCTCAAGTCG 34791 32 100.0 35 ................................ GTGTATGACGTGCGCATGATGCCTGTGATATCGCG 34858 32 100.0 36 ................................ GCCAGCCGACTTCCGATGCGATATTGAACGCTGAAG 34926 32 100.0 36 ................................ CGTTTTCTCGCGCAGTTTGAATGCTGGAGAGCCACG 34994 32 100.0 37 ................................ CGCTTGTCGTTGTAAGGATTGCAGAAAGTGTCCGGAG 35063 32 100.0 35 ................................ TTTTTCCTTTTGCCTCTTTTACTGTTTGATTTTCG 35130 32 100.0 36 ................................ GATTATATTTTTAATGCTATGATGACTAGTCAAAGG 35198 32 100.0 35 ................................ AACCTGCACAAGTGAAAACCCGTGCCGGAGAGCAG 35265 32 100.0 34 ................................ TCTTGTGCCTGTTGAACACAAGATGCGTGATCCG 35331 32 100.0 34 ................................ TGGCGAGTACGGTGATCTTACTTATCGCCCGCAG 35397 32 100.0 35 ................................ AAAGAGGATGTGACTTTTCCGGGTGCGCATCCTCG 35464 32 100.0 37 ................................ TCCTGTACCGCCGCCAGCTGTGTTTTGAGCTCCGCCG 35533 32 100.0 35 ................................ ACATCTGTCCCGTTTACCCGCGCATATTTCAAGAG 35600 32 100.0 36 ................................ TCTCCCTTGCATCCACTCTGTTTTAATGCTAAATTG 35668 32 100.0 36 ................................ ATTTGATTCGGCGGCCGAAGCCGCAAAACAGTATGG 35736 32 100.0 36 ................................ CCACGGTGATGGCTCCACCGATAAGAAGGACTGCAG 35804 32 100.0 34 ................................ CATTTGCACCGTCAACCGCTGAACCACGAGCAAG 35870 32 100.0 36 ................................ TCTGACATTGGTTCTGCGGTCGGCGAGGTAAACACG 35938 32 100.0 34 ................................ GTGTACGATTTGACAAAAAGGAGGACGAATAGAG 36004 32 100.0 37 ................................ AGGTGAGCCTGTTTACAAAACGCGGCCTGTCAGGAGG 36073 32 100.0 34 ................................ CATGGCGGACGGATACACCGACTGGGGGAATGAG 36139 32 100.0 37 ................................ AGGTGAGCCTGTTTACAAAACGCGGCCTGTCAGGAGG 36208 32 100.0 35 ................................ ATAAGCATTATCGGTCAAAATATAGAGGAAGAACG 36275 32 100.0 37 ................................ CTTGTTTAATGATTACGTTCCGGATTTGGATCCGGTG 36344 32 100.0 36 ................................ AACAAAAGACTGCTTAACATCATCATGCCCGTCAAG 36412 32 100.0 35 ................................ CTCAGCCGCCACACGCTTTGCATATCCGGCGACGG 36479 32 100.0 35 ................................ AAAATACCGTAGTCCATGCTTATGTATGTTTCTTG 36546 32 100.0 36 ................................ TCTAAGACTAGTGGAGAGGAAAGAGAAGCCGCAGGG 36614 32 100.0 35 ................................ ATCTTTGCCACCATAAATGTAAAACGTGTTTGTTG 36681 32 100.0 36 ................................ GCCTCGTGCAAATAACTGCTTACCGTAGTCCTCTGG 36749 32 100.0 36 ................................ CCTCCCATATTTGCAAGAATATTTGTACCGTTTTGG 36817 32 100.0 37 ................................ AGACTCAATATCAGCGTGCCGGCACTCGTTATTGTGG 36886 32 100.0 37 ................................ GATGATGTAAAAAAATCGCCCCGTCGTTTGACGGGGG 36955 32 100.0 36 ................................ ACTTCATTGGTATTTTGTAAGTGTACTTTTGTGACG 37023 32 100.0 34 ................................ TCGCATTTCTTTCCGCAATGGATGAAATGGAAGG 37089 32 100.0 36 ................................ ATACTCCGGCCTGCTCAAAAACTCTGCTTGTTTTGG 37157 32 100.0 35 ................................ CAGTTATTGCGCAATGCGAGCATTGCGCAAAACAG 37224 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 49 32 100.0 36 TCCCACCCCATGCGGGGTGGGTGGATTGAAAT # Left flank : TTCCTTTGGAAATGAGGTATTATCATGATGGTTTTAATTACTTATGATGTCAACACCGAAGACGCCGCGGGCAAAAAGAGACTGCGCAAAATCGCAAAGCAGTGTGTGAATTATGGACAGCGTGTTCAAAATTCCGTTTTTGAATGTGTACTTGATGCAGCACAGTGCAAACAGCTGCAGCATACATTACTATCCATCATAGACACGGAAAAAGACAGCCTGCGTTTCTACTATCTTGGAACTCATTATCAAAAGAAAGTAGAGCATTTCGGCGCGAAGCCCATATATGAGCAAGAAGGGGTGTTGTTGATTTAATCGTGCGAAGATCAAGCAATCATAAAAATGCTAGGCAGTTCGCACCAGAAAAAACAAGTAAACTATAGTTTTTATGTAATATATATTTTCTATTACCATGACTTTTATAATGATTTTATGATAAATGCAATAGAAAAGTATATGTTTCGCATAAATGCAGCATATGAATTTGTGCATTTATGCTG # Right flank : TCGCTAAAATTAAGTTTAACGACGGAGCGAACAGTCTAGCCCACACAAAGTAAATGTATTGAAATGAGATTTCGCAAACAAAAAACCGAGGTGACGTATTGTTACCTCGGTTTTTTGTTTCTAATTATATAATTTTACGCATTATATTATGCAGAAACAAGTATGGAAACGACGTCTGAAATACATTCGTTGGAAGGAAGCAGAAATCGACTTCACTTTTTGATAATTTCCTTGCACTTAGGTTCAAAGAATTCTTTGATTACATATTCTTGCTTATCTGATTTTGCGATATTCTCAAAAAGTTTTTTGTACTCTTTTGGTGCAATCCCATCCAGTACAGCAATAAACTCATCAGTTTCTGCTTCATCAAACAAATACTCTCCAATAATGCAGAAGTATACGCATTAAACAGTCGTCCGTATTTGTTAACATCATTTTCATGCAGAATATCTCCAACTGCATTTATTGCTTTGGCACCAACCAAGCTACCAGCGAATCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCACCCCATGCGGGGTGGGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.30,-8.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //