Array 1 4694590-4696934 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033069.1 Acidovorax sp. 1608163 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 4694590 36 86.1 30 C.G..A......A.............A......... ACGGCCCGGCTTGAATGAGCCCAGTTCCTC A [4694594] 4694657 36 100.0 30 .................................... GGGTGCAGTCAATGATGCCCGCCTGCTCTG 4694723 36 100.0 30 .................................... GATGGGGTCAGCGCTAAGTCCTGAGGTCTT 4694789 36 100.0 29 .................................... CTCGGGGTGACCACTTCGCCATGCTCTTG 4694854 36 100.0 30 .................................... CTTTTTTCGTCAGCGCCTCTCGGTCGTACA 4694920 36 100.0 30 .................................... AGTCCTGCTCGGTGCTGTTGGCGTACACGC 4694986 36 100.0 30 .................................... GTGCATTCGATGCCGCAGACATCGGCCTTG 4695052 36 100.0 30 .................................... GTTTTCACCCAGCAATAAAACAAGCGGTTG 4695118 36 100.0 30 .................................... CTCCGTCGAGTCGCACGCAAAGTGGATTGG 4695184 36 100.0 30 .................................... TGAAATACGACAACCCAGCTGGACGTTTGC 4695250 36 100.0 30 .................................... GACGCAAGTGAAGAGTGCGTTAACTCCTGA 4695316 36 100.0 30 .................................... CCTAGGTAGGGGCTTAAGTGGCGATGCCAA 4695382 36 100.0 30 .................................... GTTATGCAAAGTGAGCTTAACAAGCTCCCG 4695448 36 100.0 30 .................................... CAAAACGCGCCCCGTGGAAGGAATCGACCA 4695514 36 100.0 29 .................................... GCCGTCTGCCACAGCAAACACCGCCCTGC 4695579 36 100.0 30 .................................... GTGGTGGGCATGCTCTCAAGCATGGGCGTT 4695645 36 100.0 30 .................................... TCGACTTGGCACCTTGACCCGAGTGCAAGA 4695711 36 100.0 30 .................................... CGTGGCGCAGGTACAGAGCAACTGCGGCCA 4695777 36 100.0 30 .................................... CGATGGTGCGGAACAGTGTGCGCCGCATCA 4695843 36 100.0 30 .................................... CCACTCGGGAGGCTTGCCAGTTCCACGTAG 4695909 36 100.0 30 .................................... CGAATGTCGTACACCTGATATGGGTGCAGG 4695975 36 100.0 30 .................................... AGAGCGGGCGTAAAAAAGCCCGCAAGGAGC 4696041 36 100.0 30 .................................... GCTTACCGCGTTCGGTGTGCCGCTGGGTCT 4696107 36 100.0 30 .................................... TCGCACCAAGCGCGTGAACCTGTCGTTGAA 4696173 36 100.0 30 .................................... TACGGCGATGCGCGGGTGTCCGGCGATGCG 4696239 36 100.0 30 .................................... GGAGGAAGAACGCCAGCGGCAAGAGCAGTG 4696305 36 100.0 30 .................................... ACCGGCGGCCATCGCTTGAGATGCAATCCG 4696371 36 100.0 30 .................................... TTTGACCAGCGCTGATTACATCTCGCTCCA 4696437 36 100.0 30 .................................... TGGTGGCGATGCCTGCCAAGAGGTAAGTCA 4696503 36 100.0 30 .................................... GCAACCGGGCTACGGGTTCCCCAAGTTTTG 4696569 36 100.0 30 .................................... CCCCACGGAGGCCCCCGGTGTTATTATCGG 4696635 36 100.0 30 .................................... TTTGGGCCTCACTGGCACAAAGACGGGCGT 4696701 36 100.0 30 .................................... GTCCAGGCTGGCGATAGGATCACGCCTTAT 4696767 36 100.0 30 .................................... CCACTCGGGAGGCTTGCCAGTTCCTCGCAG 4696833 36 100.0 30 .................................... CGACAGCAAGCGCCGCAGCTACGGGGTGAA 4696899 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 99.6 30 GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Left flank : ATTGTTGATTGTTTGGCGATGAAGAACAGTGCTCGCTTCTACAGTGCCTGCATCACCACCCCTCCCCGCATGAATGAAAGGACTCTCCATGCCCACCCGTGACGTCGTGTTTCCCGCAGGCCGCCAGGCGCTGTACGAGCGCAACCGCTATTCGCCCGCCGTGCGCGCCAATGGCTTTCTGTTTGTCTCTGGCCAGGTCGGCAGCCGCGAAGACGGCTCGCCCGAACCCGATGTGGCCGCCCAGGTGCGCCTGGCATTCACCAACCTCAACGCCGTGCTGCAAGCGGCAGGCTGCACGTTTGACGACGTGGTGGACGTGACGATGTTCGTGGTGAACCCCGAGGCGAACTTCGACACCGTCTGGGGCATCGTGCCCGAGTTCTGGGGCGAGGCGCCCTACCCCACACTCACCGGCATCGGGGTGACGTGGCTGTATGGGTTTCAGTTTGAGATCAAGGTGGTGGCGAAGCTGCCGTGAGGCCGAAGAGCACGTCGCGCTC # Right flank : TCTGATCGCGATAACCTCTTGATAACAAAAGAAGTTTTCGCTTTCAGAGAACTAGAAAACAGCGCCATTTGCTAGAAGAGGTCGAATTGGTCCGGTGCTTTTTGCGCCGGTTGTTTGCTGCGTCCGTGGTAAGTGATGGCGCGTTCGTACTGCTTGTCGGTGAATTGGAAGATATTCACTTTGCCGCCCTGTGGCAAGGCGCGCTCAACGGCTCTGCACAAAGTGTCTACCTGCGCCTGGCTGGTGCAAAAGCGCATGTACACGCTGAACTGGCTCATTTCAAAGCCCAAGTCCAAGAGGCCATTGCGAAACTGCGTGGCGGCCTTGCGTTCGGCTTTCTCAATCACAGGCAAATCGAACATGACCACCATCCACATAAGTCGGTATCCAGACAACATGGTGTAGCAAGGGGCTGGCGTTGACGGGGTTCAGTCCGCCTCAAAACTGCCAGCCAGCGACAAGGGCAAGCCAGGCAAAGGCAAATCCAGTCTGGTGCGTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //