Array 1 248703-251352 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJGN01000003.1 Klebsiella pneumoniae strain EuSCAPE_RO028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 248703 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 248764 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 248825 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 248886 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 248948 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 249009 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 249070 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 249131 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 249192 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 249253 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 249314 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 249375 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 249436 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 249497 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 249558 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 249619 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 249680 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 249741 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 249802 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 249863 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 249924 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 249985 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 250046 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 250107 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 250168 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 250229 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 250290 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 250351 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 250412 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 250473 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 250534 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 250595 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 250656 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 250717 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 250778 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 250839 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 250900 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 250961 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251022 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251083 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251144 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251205 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251266 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 251324 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGATAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //