Array 1 633729-634619 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024705.1 Fusobacterium pseudoperiodonticum strain KCOM 2653 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 633729 30 100.0 37 .............................. TTTTAATCTCATCAGGGACTTTCTTTTCGTTAATTCT 633796 30 100.0 36 .............................. GTTATTAAGAATAAGCTAATCGGCTTGTTAATGACT 633862 30 100.0 36 .............................. AAACTTCTACAATAATTTCTGTACGATTCTATGATA 633928 30 100.0 36 .............................. TTGATGTTGATAGTTATAGTATCTCCACCAACTATG 633994 30 100.0 38 .............................. AAGGGTAACTTTATTAAAAAACTAATTCAACACTTTAA 634062 30 100.0 35 .............................. CTACCTAAAAAGCCAAAAACTGAATATGAAAAAGC 634127 30 100.0 34 .............................. CATCAGTTTGCTAAGTGTAATGCTAGTATAGTGA 634191 30 100.0 37 .............................. CTGATTAAAATTGGTCAGTTGCTAGAGATAGAAAGCA 634258 30 100.0 35 .............................. CGATAATTTGATCATCTGCATTTATTGCTATCGGA 634323 30 100.0 36 .............................. TCACCTAACTCGTGTATAATTTTTGGGATATGTCTA 634389 30 100.0 38 .............................. TTGATAGCAAATTAGATAGACTTAGATTTACAGAAAAA 634457 30 100.0 36 .............................. TTCTCTAAGTCTAATTGACTTATTTTTAAATTCTGA 634523 30 100.0 37 .............................. CCGCTTATAGATGTTAGATTAGATTTTCTTAAATTCG 634590 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 100.0 36 CTTAAAGTATTATCATATTGGAATTTAAAT # Left flank : AGCTTTTCAAATGTGGTGGTGATAAAATGTATGTTGTTGCAGTATATGATATATCATTGGATGAAAAAGGTAATCGTAATTGGAGAAAAGTTTTTGGCATTTGTAAAAGATATCTTCATCATATTCAGAAGTCTGTTTTTGAAGGAGAATTGTCTGAAGTAGATATTCAAAGATTAAAATATGAAGTTTCGAAATATATTAGAAATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGTTAGGATTGCAAGAAGATAAAACAGATAATTTTTTATAAAATTTTATTGTCTACCTTAGATAATGTAAAATTCTCAGTACTTCGACAAATATTATAAAAGTATTTATATTAAAAGAATTTTTTTAATATTTTAAATTCTAAAAATATTTAAGTTTTTTATTTTTTTATAAAAGGTTCAGATTGACAAAAGATAGTAAAAAAAGTATTATATTAGAGTGAGATTTATAGCCTCGG # Right flank : TAAAACTGGAATCATTTCTATAAATTCAGAATTACTAGCTTAAAGTATTATTGTGGGGGTAAAGATGAAATGATCATAGGAAAATATAAAAGAAAAAGTTAATTAAATATAGAATAATAGAATAGTTAAGTGAATAATTTATATGTGTGAAAAAATAAGAAAAAATGAGAATAAATAATAAAAATAATGTAAAAATTTTAGAATTTAGACAGCGTTAATAGAAAAAAGTAAGAATATTCATAAAAGTTCAGAAGCCGTTCGAGAGAACTTTTAAAGATATTCTTTTTTTATTCAAATAAGTTTTTTAAGGTGTGCAAATAAGAAAAAATAAAAAAATTAAACTTTTATTTGCACAGCACTCTAAATAATACTAAAAATAAGACTTTTTAAAAAAGTGAGTGATTAAAAATATTAAGAAAAGAGTTTGAATGACTTTAAAAGGCTTATAAAAAGAAAAGGCTGAAAAATAGGTAAGTTTAAAATATAAAAAATGATGTGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAAAGTATTATCATATTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 669923-670421 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024705.1 Fusobacterium pseudoperiodonticum strain KCOM 2653 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 669923 31 100.0 36 ............................... TAGAGATTTAGGGATAGATAATAGAATGATAGATAG 669990 31 100.0 38 ............................... TTTTGTATTTAAAGATTTTAAGAACTCTTTTAATTTTC 670059 31 96.8 34 C.............................. TTAAATGCTTCAATCTTACTAAATTGTCTTATAG 670124 31 100.0 36 ............................... TTATTAATTATTACTAACCTATCTTGGTAAACTCCA 670191 31 100.0 37 ............................... AATGATATCAAGGTTAATCCTTTAGGTCTTATAATTA 670259 31 96.8 36 ....T.......................... TTTGTTTTCTTTCTTCAATGGACTTATTTTCCCGAA 670326 31 96.8 34 ....................A.......... GCACAAAAAGTACGTGAGGGTGGATGGGATAGAG 670391 31 96.8 0 .............................T. | ========== ====== ====== ====== =============================== ====================================== ================== 8 31 98.4 36 ACTTAAAGTATTATCATATTGGAATTTAAAT # Left flank : AATAGTTGATTATATAAGTGGATATTTAAAGAGCATCTATAAGAAAGAAATATCATCTAAAAAAGCTTTTAGAGGGATTATAAAGAAAGCCTCTTGTATTTTGGCTGTTATAATAGGTGCTTCACTTGATAAATTAATAGAAGGGACTCCTATAAATATTCCAATTAGCTTATTCAATATTCCCCTGTCTTTTAAAGAATTAATAATATTTTCAGTAATAGGGAATGAAGGAATAAGTATAATTGAAAATTTGGGAGAAATGAATTTCCCCTTTCCTTTATTTATTAAGAAGTTCTTCAAGCAGTTAAAACAGCAAGATGAGCAAGATAAAGAGAATAGATAATAAAAAATTAAAAGGAGTATTTAAACTCCTTTTTTGTTTAGTATAGAAATTTTATTTTTATCATTTTGTTTTTAAATAAAATTATCATTTTAAATTGAAATTTTTATCAAATCGTTTTGCGTCTTACATTAGGGATAGATAATAGAATGATAGATAG # Right flank : TTCAAAAAATTAAAAAAATATGAACAAAATAAATTTTATCAATTTATTTCAAAAAAATAAAAATTTTCCTTTTATTTTTTTGAAAAAAGTTGTATTATATGTATTGGATGATTTTTAACAAAATTATACTAGTTAAATATACTAAAAAAATAAAAAAGGGGTAGATAGTAAATGAAAATTGTAGTAGTAGGTGCAAACCATGCAGGAACGGCTTGTATTAACACAATGTTAGACAACTATAAAGGAAATGAAGTTGTTGTTTTTGATAGTAACTCGAATATTAGTTTCCTAGGATGTGGAATGGCTCTTTGGATAGGTGGACAAATAGCAGGTTCAGATGGATTATTTTATTCTTCAAAAGAAAAATTAGAAGCAAAAGGTGCTAAAATCCATATGGAAACAGGTGTTACAAATATTGATTTCGATAAAAAAATTGTGTACGCTACTGGAAAAGATGGTAAAAAGTATGAAGAAAGCTATGATAAACTAGTTTTATCTAC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTAAAGTATTATCATATTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 3 2191482-2190203 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024705.1 Fusobacterium pseudoperiodonticum strain KCOM 2653 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2191481 37 100.0 33 ..................................... ATAACTCTTTCTTTTGTTCCTTTAAAACTAACA 2191411 37 100.0 34 ..................................... ACTAACGTGGTCTGCTAGAAGACAATCATAGAAT 2191340 37 100.0 37 ..................................... AACTTGGTCTCAGTTTTCAAATCCTTAAGAGTTTTAG 2191266 37 100.0 35 ..................................... AATCTGAAATTAAAAATTTAGAATTAGAACTTAAA 2191194 37 100.0 37 ..................................... TCAAAATACAGAGTTGGAGAACACTCAGTTTTAGAGA 2191120 37 100.0 36 ..................................... TCTGTCTAGTCCTTGTACTAACTCTTGTGCAATTCC 2191047 37 100.0 34 ..................................... GTAAACAGCCATTTGTTCATCGCTTATTGATAAT 2190976 37 100.0 37 ..................................... CTAAAGTCATTTATTATCATGACTTGTTCACACCATT 2190902 37 100.0 37 ..................................... TTTTGACCTCCGTATACAGAAAGTCCTTGCTGAGTCA 2190828 37 100.0 37 ..................................... AACTTACGTGAAAAGCTGATTTCTCCGTGAGGGACAA 2190754 37 100.0 35 ..................................... GAAAGATATTATTAGAAACCGATTTAGCAGAATTA 2190682 37 100.0 36 ..................................... TCAAATGCGATTAATTCACCTGTTCCATCTTTTTCA 2190609 37 100.0 38 ..................................... TTAGGGTATTTTATAATGTTTCCTACATATTTAGGATT 2190534 37 100.0 37 ..................................... TTAGTATAGTCAACTATTCTAGTTCTTCCGATTTCTT 2190460 37 100.0 37 ..................................... CAAATGTTTCAGGCTTTTTAAACTCCATTATTCCTCC 2190386 37 100.0 35 ..................................... TAAATTATTTTATCTTCAAATTCTTCATTTATTCC 2190314 37 100.0 38 ..................................... TTGGTCAGTCTTATCTACTAGGGTTTGTTTGTAATTAT 2190239 37 83.8 0 .................C......C.......TC.TT | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 99.1 36 GTATTGAAGGTATTCCATTTATAATAAGGTTTAAAAC # Left flank : AATGATTGATTCTATTTTTTCAGGTGAAAGGATATAAGACTTCTCCTTTGTCTTTACTAAAAAACTATTTTTTTGTCTTGCTATACTTGCCCCCTCTGTTGAAATATATAAATCCATAATATTCCTCCCCTATTATTTTAAAATAAAATGAATATATAGAAATAAAAATGTTATAATATATATTAACACAGTATTAAAAAAAATAAATAAATTTTTTTATAAAAAATAACTTTACATTTTTCAGAAAAAGCTGTACAATAAATTACAAATATTTAATTTGTAATTTTATTTCACTTTTGGTTAGTTTTTTAACATTCTATTCTTATATTTGTATTAAAAAGAAAATCAATAATTTTTTTAATTTTTTTCAAAAAAAAGTAATAAATATTTAATACAAAAAATAAAAAAATACTAAAATTTCTCGATTTTGGTCAAATGTTGCTACCCCCTAAAAAGTGAATCAATTTGCCATAAATTCGATATCCTTATACAAATCAAGG # Right flank : AAAATCATCACTGTAATAGTGATTTTTTATTTTAGATTTTAATAGTAGTATTAATTGATATTTATTTTAAAAAATGATATATATTTTTATAGGGGCAAATATATTTTTTGAGGTGGTTTAAAATGATTACATTTGGTAAAAATATTCAAAAAAGAAGAATTAATTTAGGTTTAGATACTAATGACTTAGCTAAATTAGCTAATTACCCTAATAGAAGTTACATTGAAAAGATTGAATCTGATAAAATGTATCCATCTACTAAAAAAATTCCAGATTTAGCTAAAGCATTATCATGGGAAATTGAAGATTTATTCAAAGATGTTGAAATTGAAGATATTGAGAATGATTTTGTTTTTATTAAAAATATGTTGAAATCTATAAAATCTTATCAAGAAAATGAAACTCCTAGAAGAACGATTATTTTCTCTTTAGATGCTTGTAAAAAACATTATCTTTCTTTATTCGATAAATATATAAGAGAAGACTTTTTATCTAAGATT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTATTCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //