Array 1 1196767-1198442 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056150.1 Klebsiella grimontii strain RHBSTW-00853 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1196767 29 100.0 32 ............................. TACATTGGGTGAATGCATAATAGAACGTCGTG 1196828 29 100.0 32 ............................. GACACCCCGGCAAGTCTGGGGACTGAGCGCCT 1196889 29 100.0 32 ............................. GCTACGCTCGCACACATCACAACCGATATTGG 1196950 29 100.0 32 ............................. TATTGTGCAATACACATAATTTAGCTGATCTT 1197011 29 100.0 32 ............................. GCTGATTTATCAGTATCAACTCCTACAGATGC 1197072 29 100.0 32 ............................. CGGTTGGTCAGCATACGAGCGATCACGCGAGC 1197133 29 100.0 32 ............................. CGTCGGCGGTCAGTTGGGAAGTCAAATAAGCT 1197194 29 100.0 32 ............................. TCTATGCTCAGATAATTGCAATCCAATTTTGG 1197255 29 100.0 32 ............................. ACCTTATCGAGCAAGGAGGTACGCTCGCCAGT 1197316 29 100.0 32 ............................. TTCATTGAGATACATTAAAGAGCATTAAGACC 1197377 29 100.0 32 ............................. ATAACGTGGCCAAGAAAGCCGACGCCTCAGCA 1197438 29 100.0 32 ............................. CATTTTTATCCCTTCATGGGGGGTATGAGTTA 1197499 29 100.0 32 ............................. TATTTATTGTGGTTTGTGGTTAAATTTTAATC 1197560 29 100.0 32 ............................. AACTGCGCCTTTAAACGGGCCGGTCCGTACCT 1197621 29 100.0 32 ............................. GGGTTTTATTATCTGTAGTAATCTCTGTTGTA 1197682 29 100.0 32 ............................. CGTGATCTGCGTGGGTATATCCGCGAAGCGGC 1197743 29 100.0 32 ............................. TGATCAGCAAGTACGGCAAGCCAGCGCAATTG 1197804 29 100.0 32 ............................. CTGCCGCTCCTGTCCGGGCCTATCGGGTGGAT 1197865 29 100.0 32 ............................. CTGACACTCGGGATGGGCAGCGGCAAAACCGG 1197926 29 100.0 32 ............................. GCGTAGCCTTCTGTCTCCAGTCGAGTCCGTAA 1197987 29 100.0 32 ............................. CGGGCGCACGCTCGATACAGACAGCCATTTAA 1198048 29 100.0 32 ............................. TCTTTCAGTCCTAGCTGTTTCCGATACGCATC 1198109 29 100.0 32 ............................. TGTAACCCGCAATAAACCCACCGCATCACCCC 1198170 29 100.0 32 ............................. CCATCCTTAAAAATGAACTGATACCAAAACAC 1198231 29 100.0 32 ............................. CAAATGGCGATTGAGTCAAAGGGCGCGTCAAA 1198292 29 100.0 32 ............................. GCAGATACCTCCTGCCCGATACTGTCAGTCTT 1198353 29 100.0 32 ............................. CTGCTGTGCCTTGGTGTCGGAGCTCTGGATTA 1198414 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1982213-1982668 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056150.1 Klebsiella grimontii strain RHBSTW-00853 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1982213 29 100.0 32 ............................. GTGGTCAACGAGTGGCTAGGAGAAGAGGTGAT 1982274 29 100.0 32 ............................. CTCTGGATAGTTAAAACACCCTGGGCGCGTCG 1982335 29 100.0 32 ............................. CGAACGTAGGTTTCGTCCCAGGCGTAGCTGGG 1982396 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 1982457 29 100.0 32 ............................. ATTGTTCAGGTCATCAATCAGCTGATCGTGGC 1982518 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 1982579 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 1982640 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCCCCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //