Array 1 192394-196321 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIWJ01000009.1 Klebsiella pneumoniae strain EuSCAPE_PT064, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 192394 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 192453 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 192514 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 192575 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 192636 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 192697 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 192758 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 192819 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 192880 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 192941 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 193002 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 193063 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 193124 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 193185 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 193246 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 193307 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 193368 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 193429 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 193490 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 193551 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 193612 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 193673 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 193734 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 193795 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 193856 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 193917 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 193978 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 194039 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 194100 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 194161 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 194222 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 194283 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 194344 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 194405 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 194466 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 194527 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 194588 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 194649 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 194710 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 194771 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 194832 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 194893 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 194954 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 195015 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 195076 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 195137 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 195198 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 195259 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 195320 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 195381 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 195442 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 195503 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 195564 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 195625 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 195686 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 195747 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 195808 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 195869 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 195930 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 195991 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 196052 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 196113 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 196174 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 196235 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 196293 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //