Array 1 1518296-1519344 **** Predicted by CRISPRDetect 2.4 *** >NC_009436.1 Enterobacter sp. 638, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1518296 28 100.0 32 ............................ GTTAGCCCGAGGAAATCATTCAGCGTGCCATC 1518356 28 100.0 33 ............................ CTCCGGGCCTATCGGTTGGCCCGTCCACTGGTT 1518417 28 100.0 32 ............................ TGCGTAAACGCCATTGACGCAGGCAGGTGTCC 1518477 28 100.0 32 ............................ GCTTGGGCGCTTCTCACGCAGCCTGCGGTCAA 1518537 28 100.0 32 ............................ TCGAAACAATCACCGCGTGGCTCGCTCGTACA 1518597 28 100.0 32 ............................ ATGAGCGTGGCTTCAGGCTCACTGACATTGAA 1518657 28 100.0 32 ............................ TGCACCCTTCCGGTGAGTGAATAGAGTATTGC 1518717 28 100.0 32 ............................ TCACAAAATCAAATCGATACGGCCTGCGAATA 1518777 28 100.0 32 ............................ TCCATTGCGTCCAGTTCGTCCAGCTCCGGATT 1518837 28 100.0 32 ............................ TGCTGCTGCTCGCCCAGATAACGCCAGCGTCG 1518897 28 100.0 32 ............................ TCCGCCGCTTCGCCTTTAATCACGATCATCAG 1518957 28 100.0 32 ............................ TAAACATGCCCCTTTTCCGTCATTTGCCCCCA 1519017 28 100.0 32 ............................ AGTTCAGGCCCTGCGCCTGCTGCTGGAATTGC 1519077 28 100.0 32 ............................ TATCTGCGCGTGACCAATGATTCACAGCCGTC 1519137 28 100.0 32 ............................ ATCAACCTGTCAGCGGTTACTCAGCGCGGACT 1519197 28 100.0 32 ............................ GCCAGCATCGAGCTGCGACCGAAAAGCCCCTG 1519257 28 100.0 32 ............................ TCTGTGAGCTAATAAAAAGGCCGCCTACTTGG 1519317 28 82.1 0 .........T.C...A..C..G...... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCATTAGCGGCATGCTGGTGGCTAAAGGATTACCCGGGTTTATCGCTTATGGCGTGTTAATTGGTGAAGTGGTTGCGCCTGTGCTGATTGTGCTGGGCATTCTGACGCGTCCGGCAGCGCTGGTATTGGCCTTCACGATGATTGTCGCCTGGCTGATGGTTGGCACAGGCAAAACGTTCGCGCTGGATGCCGTAGGCGCATGGGCGATTGAAAGCCTGGTGTATTTCTTTATTGGCGCGTTGGCCGTCGCGTTTTTAGGTGCAGGGCGTTATGCCTTAGCCAAAGATCCAGCCTGGAAGTAAGTTTTATCCGAGCTGCGCGAGTTTGATGTCGAGATAAAAACGCGCATCTATAAAGAGGGTTCTTCGGAACCCTTTTTTGTGGGTGCAATTTAAGTTATTGATATTTATAAATGGATTAACCATCCGCGAAAAAAGGGTTTGGCTGGCTGGAATCCAATTTCACTTTGTATATCAAAAAGAAAGGTGTAGATTGCTTCA # Right flank : ATAATCCCAATAAAAAGGCCAGCTGATGCTGGCCTTTTGCGTTTTAACAGGCGGGAACGACGTTACGCCAGTACCAAATCACCCTGCGGATGGCAGGAACAGGCCAGCACGTAGCCGTCGGCGATTTCTGCCTCCGTCAGTGTCATGGTGCTGTTGACGGTATATTCACCGGAAACCACTTTCGTTTTGCAGCAACCGCACACGCCAGCGCGGCAGGCAGCGACAATCGGAACCTTGTTGCTTTCCAGCGCTTCCAGCAGCGTGGTGCCAACGCGACCAAAAAAGGTCTGCGCCGGTTGCAGCCTGGTGAATTTCACGCCGCTGGTCGCGGCTTCAGCCACGGGCGTGAAGAACTGCTCTTTGAAGAAGCGAGTGACCCCGAGCGCTTGTACCTCTTTTTCGACGATGTCCATGTACGGCGCGGGGCCGCAGGTCATCACCGTACGCGATGCGATGTCCGGCACGCTTTGCAGCAGTTCACGGCTCAGACGACCGGCCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1534583-1535754 **** Predicted by CRISPRDetect 2.4 *** >NC_009436.1 Enterobacter sp. 638, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1534583 28 100.0 32 ............................ GATGGGGTGCCCGTGGTTTGGGACGTTTTCTA 1534643 28 100.0 32 ............................ GTAAACGGCCGCTAATGGCCGTTTATCAGGAG 1534703 28 100.0 32 ............................ GACTCAACAATCCCCGTGTGACCTTTACCGCC 1534763 28 100.0 32 ............................ TCGCTGTGATACAGCCCGCTATCGCCCGGTTT 1534823 28 100.0 32 ............................ TACACGATCATACGATCCCAGAAATTCAGCAC 1534883 28 100.0 32 ............................ TGTTATCTGACACGTTTTGATTCATGTTCACG 1534943 28 100.0 32 ............................ GGCAGGCCGCAGCACGTTTCCCAGCGGTTAAT 1535003 28 100.0 32 ............................ TCGCTGGGTAATTCACGGTTTGTGCGCATAGC 1535063 28 100.0 32 ............................ AGTCATATCCGATGCTGGAAGCAATCAAAGCG 1535123 28 100.0 32 ............................ GTTCTTCAGCGTGAATTTGTGGCCAACGTTCA 1535183 28 100.0 32 ............................ ATTCAACACGGGACGATAACGATTCACCGACT 1535243 28 100.0 33 ............................ GGACTCGGAGAGCCCGAATTTAACACCGAGCAA 1535304 28 100.0 33 ............................ AATCAGATAGTGACTAGCCGTGGGGACTACACC 1535365 28 100.0 32 ............................ GCGCGCTCCTGACGATGTTTAAATGCCCAACC 1535425 28 100.0 33 ............................ ACCCGGCAAGATAAAAAATATCGTTCTTGATGC 1535486 28 96.4 33 ..................C......... TCATGAGCGGGCCATGCACAACGCTGGACTCTT 1535547 28 100.0 32 ............................ AAAGGAGACAGAGGCAACGACGGTAACGCGGT 1535607 28 100.0 32 ............................ TTTGCCTGACGCGCTGAAAGGCTGACACGGGC 1535667 28 96.4 32 ........T................... ATCAGCGTCAACTTCGATCTCTTCGCCCTCTG 1535727 28 92.9 0 ...........C........T....... | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CATCCGCAAGTACAACCTGTTAGCCGCTGTCTTGCGGCGTATCTGGATGTTTTCCAGACTGAGCTGGATAAATCGATGGCTGACTTCCGCATCGTTGAGTTTTCTCATGAGCAGTCGCTGCCTCAGCCAGGTGCTTGGCTTCTGGAGGATACGGAGACGCAGTGCAACTATTGTCGTGCCTTAAATCATGTGCTGCTGATCTCGCATTTTGACCGCAATATGCTCCCGCATCTGACCGGTTTGCTGCATGATATCGCCCATGCAATGGCAGATGGTCTTGCGGCATCAGCTCAGGAAAAATCCATTAACATCATTCATTGCTAATTTTGTACGCTCCCCGCCGGGAGCCATCTCCCGGCGCGTTTATCAAAACCCTATTTTTTGACGCCTTCGTAACCTATTGATTTTAATCAGCCATAAAAGATTGCAGAAAAAAGGGTTAAAACTCCAAAAGTTGATTATTTTCTTTTGGAACAATAAGATGTCCACGATCCGCTCCA # Right flank : AGCTCAGGAATCTTCCGGAAGATGGGGGGAATTAACTGCCGCCCAGGCAGCAGCCAAAAATACAAACCTCAACTCCATTCTTTAACTCATTAGTTAAACCAAAAATAAACACAGAAAATTATTCACTTAAATATTAATCGCCTCATTAAATTTATATGTAAATAATATATAAGACCAACACCTATCATCTGAGGGATATATAAATTCAATTTTTATTGAAATGAATTACCTATGTTTTATTAAAAGTTTAAGATTGATTTATTTAAGTGACTGCGTTTTAATTCTCAGGCCAGAAAAAAATGACTTTAATAATTATATTAATCAATATTTAATAAAGGTAGGGCTATGTCTGTAAATGGAATTACGCCTTCGGATCTCAAAACCATTCTCCATTCAAAACGTGCCAATATTTATTATCTGGAAAAATGTCGTGTTCAGGTCAACGGTGGGCGAGTGGAGTATGTTACACAGGAAGGTAAAGATTCTTTTTACTGGAACAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //