Array 1 182054-179892 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJCV01000003.1 Klebsiella pneumoniae strain EuSCAPE_LU005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182053 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181992 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181931 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181870 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181808 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181747 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181686 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181625 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181564 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181503 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181442 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181381 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181320 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181259 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181198 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181137 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181076 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181015 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180954 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180893 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180832 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180771 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180710 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180649 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180588 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180527 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180466 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180405 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180344 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180283 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180222 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180161 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180100 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180039 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 179978 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179920 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //