Array 1 205324-202006 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGTA010000006.1 Klebsiella pneumoniae strain 5012STDY7312711, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 205323 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 205264 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 205203 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 205142 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 205081 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 205020 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 204959 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 204898 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 204837 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 204776 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 204715 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 204654 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 204593 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 204532 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 204471 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 204410 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 204349 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 204288 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 204227 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 204166 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 204105 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 204044 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 203983 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 203922 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 203861 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 203800 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 203739 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 203678 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 203617 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 203556 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 203495 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 203434 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 203373 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 203312 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 203251 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 203190 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 203129 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 203068 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 203007 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 202946 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 202885 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 202824 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 202763 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 202702 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 202641 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 202580 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 202519 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 202458 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 202397 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 202336 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 202275 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 202214 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 202153 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 202092 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 202034 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 55 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //