Array 1 355455-355009 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000002.1 Gilliamella sp. B14384G13 NODE_2_length_727896_cov_192.162851, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 355454 28 100.0 32 ............................ AACCGACCCAAACTATTATATTAAAAAATTAG 355394 28 100.0 32 ............................ ATTGCAATGCATACATTGCTGTCGTATTTGCT 355334 28 100.0 32 ............................ GTTATTATTAATAACCGTAGAATAATGTTTCT 355274 28 100.0 32 ............................ TCCAACACCACGAACTGTGGCGCTAAATTTAC 355214 28 100.0 32 ............................ ACTCAGGAAATGTTTTTATTAAAGATGCGTTT 355154 28 100.0 32 ............................ TATAAATATGACAATACAGAAACTGATTTTAG 355094 28 100.0 32 ............................ ATAAACAACTCTAGTACAAGACTCAATCCAAC 355034 26 82.1 0 ..........T........--.G.C... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTTCACTACCGTGTAGGTAGTTTAGAAA # Left flank : CAGTTTCGCTCTAAATATAAAAGTTTATTTCTAGAAAATCAGATTGGAGTGCTTCATTTAGCGACATGAGCAATGTGCTGACAACTGAGAGAGGTTAGCATGGCAAACAGGGATGTTTGGCAAGGCTGTGTTTTGTCAGGAACAAATCACAGCCGGTGGGTTGAGAGCGAACGAAGGCGGAAGGCAGTCACGCAGTGACCATTTGCGTAGTCGCCGCGAGAGTTGGTAAAGAGGGTTCGCGCAAACCCTCTTTACTCGGACGTAAACGCCATATAGAACTAGCTACCAAACAACAAAACGTCCGAAACTAAAAGAACTAAAAAAGTTGAGGAACGGGGTTTTTTGAAACTTAAATTTGTACCCATTTCCAACCCTTTTTTTGACTTAAAATAAAATTATTAAAAATCAAAACATTAAGAAGTTACTCAAAAAAAGGGTTTTTAATAGTAAAATTACGCTTTGTCTTTTTGCCAACTGCATTTATAGTATGTTGTGTTCTA # Right flank : AGTCTTAACAATTATTTACCAATCTGAATTTGCTATAATTACCTAATATATCTATACTTTTTTCTGCAAGGATTGCATATTTTTAGATAAAAATTATAAATTAAAGGATTAAGAGCATGTTGAGATACCCTTATTTAGGCGCTATTTCTAATTTAATTGTTAATGCAACATTGACCAATAAAGAAAATATATCGAGTCACGGCCCTTCAATACAGCAATTATTCATTAATCAGCCAATAAAGCGAAATTCAACGTTTAATAAAACACTACTCAAATATTCATCCTCATTTGGCCAAACAATAGTGAAATTCTTGAAAAAGATTTGTTTATGTTCTATGGCTTTTTCAACTATATTTAGCCCTGTATACGCGTTAAGTTCATTTACCACAGAAAGTATAAAAGGTAGTGCACCATATTTAACGCTAGATGATGGTGTTAGTAAAATAACGAGTACAGAAGAGCTACTGGCAATTAAATTACCTAATGGTACTGTGATAACC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 362750-362241 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000002.1 Gilliamella sp. B14384G13 NODE_2_length_727896_cov_192.162851, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 362749 28 100.0 32 ............................ AAATCCGACACGAGCTGCAACACCGAAACCCA 362689 28 100.0 32 ............................ CAGATGAAAAATTCAGAGTGATCGCCATTTAT 362629 28 100.0 32 ............................ ATACCAGACCCAACCGTTAACATCCCGTTATC 362569 28 100.0 32 ............................ ATTCAGTCGCTTGGCGCGGTAATCGGTGAAGT 362509 28 100.0 32 ............................ TCAGGTGGCATGCATATAGTAGTCGTTGAGCC 362449 28 100.0 32 ............................ ACACACCATTAGGAATAGGAATAGGTGTTGGT 362389 28 100.0 33 ............................ ATAACTCTCTAATAACATTTTTTCCTTTTTTTT 362328 28 100.0 32 ............................ GCTGAGACCATGAATTACCGCCCATGCGCATA 362268 27 92.9 0 ........................-..T | A [362248] ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.2 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : TCCATATATTACCTAAACCCACAGCAGAACCGGCAGCAGCAAGCATAAATCCCATGCGAGAGCTCCACTGTGAATGACTTTTCTTCATAGTACCTGTACTCATGAATCTATTTTCCCTAGAGTTTTGATTAAATATTTAATTTTAGTATCAGCAAAAGCCTAACTATTTTTTTATTAGATAAATAAAATGCTAAATCATGCCATGAAATAAATTTATAAACAAGAAAACATTATCATTTATAACGATAACCAATAAAAAATTAAATCGTTAACCTTAAGTTTAATCGTGTTTTGAAGTGGCCAGAGTAAAAAACGAGCAATAAAAAGTTGAGGAGTGACGTTTTTGGCGATTACATTTAGACTATTGCAACCCTTTTTTTTACTTAAAATAAAATAATTTAAAAATCAATATGTTGAAAAATGGCTCCAAAAAAGGGTTTTTATTAGTAAAAATAGACTTTGCCTTTTTGCCAACAACATTTATAGTATATCTGGCTCTA # Right flank : TTTTTAGTCGTTACATTATTTTGACGAAAGAGATTAAAAATCATGTCAAATATGCCTTTTTGACAAGGCTATGTATATTCTAATACAAATAATAGATAATGTATAAATACTTAACGTGAATGAACTAGTCATGTAATGACTAACTAGTTTCGCTGTCGATGGCAAAAATTAGTGTGTGTAACCCCTTATTCGAAAATATCCTTTGTACTAAAATCCCCTCAGAAATTATTTAAACCTCTAAACGTTAGTGAGCTAAAACAATTCAATATGACAAAAAGTTGAGAAAAAGGGAGCATGAAATCTTTGATATTGATAATCATCAGCCCATCGCATATATTACATAGAATATTTACTTCTCTAAAAAGAATAGTCATGACACAAAACATCGATTTGAACGAAATAGATAAGTTTGCAAAACTTGCTTCGCAATGGTGGGATCCCAACGGCCAATGCAAACCATTACATATTATTAATCCATTACGAGTAGATTATATAAAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 692178-690769 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000002.1 Gilliamella sp. B14384G13 NODE_2_length_727896_cov_192.162851, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 692177 28 100.0 32 ............................ ACCAGCGCCCAGCAAATGAGAATTACGCATTG 692117 28 100.0 32 ............................ GTCATGGGCAAAATACGCAACTGGCGTTTGAT 692057 28 100.0 32 ............................ TGAATGTGGTCAAAAAGCCATCATCACCAAAA 691997 28 100.0 32 ............................ GATACAACCGTGAGGGTAAGGCGGTCGGTTTT 691937 28 100.0 32 ............................ AACTTAAGGGAAACACCCCGCTAGCCAAAGAA 691877 28 100.0 32 ............................ TTAACCGCCCCCAGTCTTTGTATAATTGATCC 691817 28 100.0 32 ............................ TGCATCGGCTGCGGCAAGCACTGGGGCGATTG 691757 28 100.0 32 ............................ AAAACGCAACAGGAGGGATTAGGCGTTACTCA 691697 28 100.0 32 ............................ ACGGGCAATAAATCCGCGGTTAAACCGAGTAC 691637 28 100.0 32 ............................ AAAAACATAAAATCATATATCAAACAGGTAAC 691577 28 100.0 33 ............................ CGCAAGGGCGGCTTGCTTAAAACTGTTTGCCTA 691516 28 100.0 32 ............................ TCTGGTCGCTTTGTGAGCGAGAGACGCCAGTT 691456 28 100.0 32 ............................ AAACTTTATGGTTATATCGTAAACGCTACTAT 691396 28 100.0 32 ............................ TTCGTTGCGCCAATATTTATTTTCGAACTGTT 691336 28 100.0 32 ............................ TACTAAGAGCCGAAAACGCCGCATTGACAAAT 691276 28 100.0 32 ............................ AACTAAATAAATCCGTTAGATTGGTACTACTC 691216 28 100.0 32 ............................ ATTAAAGCCAATGCGAAGCATATCTAGTGCGA 691156 28 100.0 32 ............................ TGCGCGCTCTCGCATGCGTCTAATGTTATCGC 691096 28 100.0 33 ............................ GCAATTTATTAAATAGTTAACGGATTTTTACAA 691035 28 100.0 32 ............................ CTAACCCCATTTTCGTTTGGTGTATTGTTTGG 690975 28 100.0 32 ............................ ACCGTAGTCTGATATTCTCTGTTATAACGTGA 690915 28 100.0 32 ............................ TGCATTAATCATTGCTGGATTGATGCCGTTTT 690855 28 100.0 32 ............................ AAAATCGAGCGGTTTTTTATTTTTAATTTCGA 690795 27 92.9 0 ....................A...-... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.7 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : AATCAGCTAGTGACAATAATAAAAGTTTATTTTTATCAATCAGTTCGGTAAATTTTATCTAGCGACATGAGCAATGAGCTGACAACTGAGTGAGGTTAGCATGACAAACAGGGATGTTTGGCAAGGCTGTGTTTTGTCAGGAACAAATACAGCCGATGCGTTAACAGCGAACGAAGGCGGAAGGCAGTCACATCGTGACCACTTGCGTGGTCGCCGCGGGAGTGGGTAAAGAGGGTTCTCACCAACCCTCTTAACTCGGACGTAATCGCCGTATAGGAATAGCCACCAAACAACAAAACGTCCGAAACTCAAAGAATAAAAAAATTTGAGGAACGGGGTTTTTGAAGACTAAAATCCATCCCATCACTAACCCTTTTTTTTGACTTAAGATAAAATATTTAAAAATCAATAGGTTGAAAAATGGCTCAAAAAAAGGGTTTTTTTTGGTAAAAATAGACTTTGCCTTTTTGCCAACAACATTTATAGTATATCGGGTTCTA # Right flank : TTAGTTAAAGTTATAACGCTCGAAATCCACCAAACTAGAAACGTTTAGCAAAGGAGTTTTTTAAGGTGAATAAACTTATCACATGCTATAATCGTTTTCACTCATAATTAAACTTTACACCTATTGTGAATAATAATTCAATTGACAACAAACTAAATGAAAAAATGGTGCTTATTTTCAAAGCACTCTCTGATCCAGTTAGAATTGAAATAATTAAATACTTAAAAAACATAAGAACTGAGGTCATTTGTGGTGAAATAGGCCAAGCGGTTGGTATCAGTAAACCTTCGGGAACTTATCATTTTAGGTTATTACAACAAGCTGAATTAATTAATGTAAGAAAAAGTGCTAGAGAAAAATATATAGGACTGAATAAATCAACATTTGATAAATATGTTACAGGCTTTTTTGATAGTCTTTAATATATTTAAATGTTGATTTAATCTTGAGTTTACTACTGGATGTTTATTAACTATTATAATTTGCGCCTTGTCGTTAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 85343-85076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000001.1 Gilliamella sp. B14384G13 NODE_1_length_953618_cov_204.931943, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 85342 28 100.0 32 ............................ TAACGCCTCACAAATAGTTGTAGTGGGCGTAG 85282 28 100.0 32 ............................ TTTTGGTATTTACTTAATTATGACCTTTTGGT 85222 28 100.0 32 ............................ TGAATTAGCCCAAACGCTCAGCGTTGCCCAAT 85162 28 100.0 31 ............................ AAAAAGATGGTCAGCTTTTTACGCCGTGTTA 85103 28 75.0 0 ......C....CA...T....CA.A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.0 32 GTTCACTGCCGAGTAGGTAGTTTAGAAA # Left flank : AAGCCAAGTATAGATTTAACGCAAGTATAAATACATATTATTTTGATGCTTTTTTATCGAAAATAAAAGTTTTTTAAATCTGTTTTTTACAAAATAATCATGATCAAATCATGCTCGCAATTTTTTATTTGATGATGATTGATATGACTTATCGTGGTTATATGGATATTAGAAAGAATGCATTCTCAAATAGAATTAATAAAGCCTGCATTATGAGCACTAGATTCGAGTTTTAAAGACTCTTTTTTACTCAATGTCGAACTAGCGCAAAATCAATTATTGAGCGAGAAACAGCGCATATTAAAGCAAAAAATATAATTGATAAATGGAATAATGTTTTGTCTGTAATTAGACAACATTAGTAAAACAACCCTTTTTTTACCGACACTTATAATTCATTTAAAATCAAACAATTATAAATTGGTGTGAAAAAAGGGTTTTTAGTTATAAATTGGTTATTATTCTTTTTCTGAACAAAGTTTATTGTGTATAATGTTCTT # Right flank : TTCTGTTGAAACACTTTATTAAAAATGTCTAACTCATGATTTAGGCATTTGTCACTTTTTGACTGCTGCAAAATGATGAAATTGGCATTTAAAAATTTGAGGAAAAGGGTTTTTAATAACCGCAAATTTAGCGAAAAAATTAAATGTTAATTCCGAAAAACAAAATTGTAACTTAAACTTGAACGCTTAAGCAGATCACTATATTATACGCGCCTTAAAATTCATCAATCAGCCAGATACTTGAAAGAGTCCTAATGTTAATTAATGCCAAAGATATTCTTGAAAAATTAAATCCACATAATAAAGTAAACTACGATTCAGTTTTGAAAGAGGTGATTGCTGATTGGCAGTTAGCATCAGCACGACCAAAGTTACTAATTCATAGTTGCTGTGCACCATGTAGTACTTATGTACTGGAGTATTTGGCTCAGTATGCAGATATTACTATTTATTTTGCTAATTCGAATATTCATCCGCGAGTAGAATATGAATATCGTAGT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 600837-600509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000001.1 Gilliamella sp. B14384G13 NODE_1_length_953618_cov_204.931943, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 600836 28 100.0 32 ............................ CATCGTGGATTGCAGTTTGGGTTGGTCAAAAT 600776 28 100.0 32 ............................ TGTGATAGGCGACTGCTCTTTCAGTTGGTGAT 600716 28 100.0 32 ............................ ATTGCTTGCTGAGCTTGTTGTAATGCATTTTG 600656 28 100.0 32 ............................ ACTAAAAAAACGTGTGCCCTTATTTTCATAAC 600596 28 100.0 32 ............................ GGACAATAGTAAATATGATTTAAACCTAACTC 600536 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 CTTCAAGGCTGCATAAGCCGTTTAGAAA # Left flank : CCGAAAAACGTTTAACCGCACAAGGTAAATGGTCAGCCGAGGTAAAAAACAAAATGGTTGAAAAATGGGGCAGCCTTCATTTGAACTATCCACACCTTCATTTTGCTAGCAAAAGCACTGGGCAACATTTTATTATGTGGCTGAAACAACAAAAATGTGCAACGGCTGTTGAAGGAACATTTAATAGTTACGGACTCAGCAAAACAGCAACTGTTCCTGATTTTTAACTAAATAATAAGGGCATTATTATAATGCCCTTAGCTGCCAATAATTAACAATATTAACGGTACAAATTTTGAGGAGCGTACTTTTTAAAGCTAAAAAATTTGAGGAAAGGGGTTTTTAAAACCTAAATACCATGCAGTGTTAACCCTTTTTTTTAACTAAAAATAAAATTTTTAAAAATCAATTAATTGAAAAGCCACCAAAAAAAAGGGTTTTTGCAAAGTAAAATAGTCTTTGCCTTTTGCACAACAATGTTTATAGTATTTGGGGTTCTA # Right flank : CAACTTATCAAACGCCCAAAGTTCAAGGCTGTAAAAGTGGAAAATTTTGAGGAGCGGGGTTTTTAAGACTAAAATCCATCCGATAAATCACTAAAATTAGTTATAACATCAGCTAGGGTCAATAATAAAAGTTTATTTTTATCAATTAGTTTAGTGCTTCTCATTTAGCGACATCAGCAATGTGCTGACAACTGAGTGAGATTAGCATGACAAACAGGGATGTTTGACAAGGCTGTTGTTTGTCAGAAACAAATCACAGCCGGTGCGTTAAGAGCGAACGAAGGCGGAAGGCAGTCACATCGTGACCACTTGCGTGGTCGCCGCGGGAGTTGGTAAAGAGGGTTCGCGTAAACCCTCTTTGCTCGGACGTAATCGTCGTATAGAACTAGCTACCAAATAAAAAAACGTCCGAAATCCACCGAATAAAAAAATTTGAGGAGTGGGGTTTTTAAAGCCTAAAATCTATCCGATAAATCACTAAAACCAGCTATAACATCAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAGGCTGCATAAGCCGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 613905-613095 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFQB010000001.1 Gilliamella sp. B14384G13 NODE_1_length_953618_cov_204.931943, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 613904 28 100.0 33 ............................ CGCCCGGGCACCACGTTCCTGATAGAGCGAGCC 613843 28 100.0 32 ............................ TTTTCGGAAAAGGGTTTATATCCGAAATGCGT 613783 28 100.0 32 ............................ TGAAATGGTTATAGATGCAAGAAACAAAGCGG 613723 28 100.0 32 ............................ CCGACGAGTTCGCAAATCTATTTTTATGTCAG 613663 28 100.0 32 ............................ TTGAGTACAACCGCTTAACAGCAGCAGGCAAA 613603 28 100.0 32 ............................ TCACGCAATCGAATATCCATGGGTTTTGATAG 613543 28 100.0 32 ............................ TTAATTAAAATATTAATAATATCTTCTGTAGT 613483 28 100.0 33 ............................ TGCTATTACTGGACAATTTAAGCTGTTTGTGTT 613422 28 100.0 32 ............................ GCAAGAAAAAGAAGATTTGAATAATCGCCTAG 613362 28 100.0 32 ............................ ATGATGTGCCTGCTGATACTTCAGGGATTGCG 613302 28 100.0 32 ............................ CGTATGAAATTCTGACCGCTATTTTTTGCCGC 613242 28 100.0 32 ............................ ATATAATTTTTACGTAATTTTGTAATATCGCC 613182 28 100.0 32 ............................ ATATTGTTGATAATTATTTATTAATGCATCGA 613122 28 85.7 0 ....................C....TGG | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 32 GTTCAACGCCGTATAGGTGGTTTAGAAA # Left flank : AGTACTCAATTTTACCTCTAATTTAGCAGGATTAATCTTCTTTATTGCTGGAGGTGAAGTGGTATGGTCAATTGGTTTAGTTATGTTAGTTGGCCAATTTATCGGCGCAAGATTAGGTGCAAAAATGGTTATTGCTAAAGGACGAAAATTAATAAGACCAATGTTAATTACCGTTTCTACCATTATGAGTGTCAAATTAATCTATGAAAACTTCTTTTAATCATTGCTAATAAAATTTAGAACCAGTTTTAGTACAATCAATAAGCTAACAACCAAGAATACATTAGCCAATTAAAAACCCCGTTCCTCAAAATTTTGAGGAACGGGTTTTTTGCATTTCCCAAAGTCTATATTTTAAATCAATAATAAACCCTTTTTTTTACATCAAAATTAATCTGATAAAAATCAGATAGTTGAAATTAACCGCAAAAAAAGGGTTTTTAATATCAAAATTGTCATTTACCTTTATTTGAACAATGATTATATTATATTGGTTTCTA # Right flank : TATTGCTAAATAAGCTAAAAAACTGAACTCATATGTTCAGTTTTTTTGTATACTAACTTTTTGTATTCACTCGATAAGAGAAAATATAGGCTATAACAGCAATAATGCCAAATATAAGAGATAGAAAAAACATTGTCTGATAGGCGCAATTTACTGAAATTATTTGATCTAGAGTTAGGTTGATTAATATTCCTGATAATACGCTTCCAAATGCACCTCCAATTTGCTGTATCACACGAGTGATAGCACTTGTATCCTTAATCTGATTTTTTTCACAAAACTCAAATGGAGAAGAGAGAACAGCAATCGTAGCAACACCTAATCCGGAGCCTCGAACAGTAAAACCGATGATTTCAGAGGCGTTTCCACCTACTTGAATTATTAATATACTTATTGCTGATATTATTAGACCTATACCAATAATTAGAAATGAATTTATCTCACTTAAAGATTTATAAATAAATTTTCTCGCCAACCAAGCTCCTACACCTTGTAAGGCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAACGCCGTATAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //