Array 1 209-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNKE01000020.1 Flavobacterium columnare strain SP1805 NODE_20_length_58667_cov_207.089333, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 208 25 100.0 41 ......................... GTATCTACAACTACTCTGTTTTTATTCTTTGTAAAAACTCA 142 25 100.0 41 ......................... GTATCTACAACTGTTATTGCGTCTTCGATAGAAGCAACAAG 76 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ========================================= ================== 3 25 100.0 42 GTTGGGAAAGCCCTTATTTTGAAGG # Left flank : TGAAATCATAAATTTAGAAAACATAGATATTGAAATTTTAATTAAATATTATGATTATAATACTGAAAAGTTGAAGGAAAAAATAAAAAATATGGATGAGGATGAAAAAGCCAAAATAGTTAATACTAAAGAGAATTATAACAAAATAACCAATGTTTTAATTAAAAAAGCACTTGTTTTAATTATCATTCGCAACAAAATGGCGCACAATCAATATCCTCCTCAATTTATTTACGATTTAGCGACTCGTTTTGTTCCAAAAAAAGAAGAAGAATACTTTGCTTGCTATTTCAACCGAGTTTTTGAAACCATAACAACAGAATTATGGGAAAACAAAAAGAAAAAAGATAAAACACGGGTCTAAATACAATTGCTCTTTGACATTTTAAATTAGGATTAAAAAAATGACTACATTTGCAGTGATTAAAACAAAAAAAGTTCATTTTTTTGTATAAAAAATTGTAGTAATCCCTTACTACGAGAGGCTTACCAACACTTAG # Right flank : GAGGGACAAGCGTTAAGAAATAGTCCAGTGGACTATTTTAGCGATGTAGCCA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAAAGCCCTTATTTTGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 74010-74826 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNKE01000002.1 Flavobacterium columnare strain SP1805 NODE_2_length_149367_cov_253.509960, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 74010 36 88.9 82 ..GA.TA............................. CCGTTTCAAAACATTAGTCATCGTAAGTTGGTTTACAAACACCAAGTTAATATTTATTATAGGTGTGTTTGTGAATCTCCCT AA [74017] 74130 36 91.7 30 C.G...A............................. CAGTTTCTTAAAACTTGACCAGGACAATGG C [74134] 74197 36 100.0 30 .................................... TTTGATTAATTCTCTCCAGTGTTACTTTGT 74263 36 100.0 30 .................................... CTGTATAAAAAGATTTCAACGGCTTTAAAT 74329 36 100.0 30 .................................... ACACAATTTTTTTAATTTAGGGGGTACGGG 74395 36 100.0 30 .................................... CAAATTAAAATTATGGAAACAAAAGATTAT 74461 36 100.0 30 .................................... TCAGAGCCTTCTATCCAACAGGAGTACCAG 74527 36 100.0 30 .................................... CTTTCACATCGTCAGGGTACAGCGATAAGT 74593 36 100.0 30 .................................... GTAAGTACAACGGTTCATCGTTAGTACCAT 74659 36 100.0 30 .................................... AGATAAATCGAATCTCCTTTTCTTCCATGT 74725 36 100.0 30 .................................... TTTCAAAAGTTGGTCATTATACTTCACCTT 74791 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================================================== ================== 12 36 98.4 35 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TGCTTGCCGAATTTAAAAAACGATTAAATGTATAATTATGATTTAAGCGAGCAAGCTAAAATCTATTTGTTGCGTATTTATGAATATAGAATTGGTCAGTTTGGTCTAGACCAAGCTGATAAATATTTTGACATGATGCACGATTGTTTTAATAAAATTGCTAAAATCCATATTTATTCCCTTTGGCATCAAATATTAAGTCAAATTATTACAAATGTGTTTGCGGAATTGACACCATCTATTATAAAGTTGTTACAAATGGAGTTATCATTACAACAATAGTCGGAAGGCAGGATTTTGAAATTCAAAATTTAGTTCATTGACATACAGTATCAAATCGCAAATAACCAAACTTCATACAGATTGGTTTGATTAAAGATTAGAAACCGAGGGACGAGTTTCGGCGAAGTCAAAACACGAAATTACTTATTCCCTGAAACAATCGCACGAACTGGTTGTGGTTTACAAACACCAAGTCAATATTTGTTATAGGTGTGTTT # Right flank : TAGTTGATGTTTTATCTTCTAATTATCAAATGGTTAAGTTTTGATATCGTTAAAAAAAATGCTTCTTTTTTGGGGTGCTATGCCAAAATTGAAGCATTTTTTTATTCCTAAAATAATTCAAGTTGAGTGGGTTGAGGTCCCGAAGGAATTTCTACTTTTCCCCAGAAATTTTGTATATTCCCAAATTGCTTGTCTGTAATTCGTAATATACTTACTTTTCCTGAAGGAGGTAGGAGTTTTTGTACACGTTTTTCATGTACATCAGCACTTTCGCTACTCGCGCAATGTCGTATATACACCGAGTATTGCATCATACTGAATCCATCTTTCAAAAGTTGGTTCCGAAAGCCAGAAGCATTTTTTCGGTCTTTTTTAGTATCAGTAGGCAAATCAAAAAATACAAACAACCACATGATTCGATACCCGTTTAAATCCATAATTTTGGGTATTTTATCTTTTTGCGCTCCCCAGCAAAACACTGTTGCAACGAACTAGCCGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //