Array 1 4445124-4451831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020469.1 Halomonas sp. 'Soap Lake #6' chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 4445124 32 100.0 34 ................................ GAGTGCATCAGAGCGCAATCCTCCGGCCCTTATG 4445190 32 100.0 33 ................................ GTTGGTGCGAACTTGGCAAACGCCCGCTTTAAC 4445255 32 100.0 34 ................................ TCGAATACGGCGAAACTCGCGCTGTCGAGAATGT 4445321 32 100.0 35 ................................ ATCATCTGGACCGAGTGCCGCGAGGCCGGGCATAG 4445388 32 100.0 33 ................................ ATTAATGACGTAGTGGCTGCCCTGCTCGGTTTT 4445453 32 100.0 34 ................................ CCCAGGCTCAAAAAACTGATGCTCGATACCCGGC 4445519 32 100.0 34 ................................ AACCGGTCTCCCGACGATTAAACCCACGCCAGAG 4445585 32 100.0 34 ................................ TATGGAGCCCATGATTATGGACGGCTCGCCTATC 4445651 32 100.0 34 ................................ TCTTTAGCCATCCCTTTTCCAGGGCCTAACAATG 4445717 32 100.0 35 ................................ ATCACTGATGGTGAGGCTCCCAAGAAAAGCGTCAC 4445784 32 100.0 35 ................................ TTGTGCCTCCAGAGATTCATGTGACTCGAGATGGC 4445851 32 100.0 34 ................................ ACCGACTGATGACGAATAAGCACGCGACTGGCAC 4445917 32 100.0 34 ................................ ATGCGGAATGGAAATTGCTGCCATTTAGCGAATA 4445983 32 100.0 34 ................................ ACGCCCCCGCCTCAAGTTGACCTGGCTGAAAACC 4446049 32 100.0 34 ................................ CCGCCCGCTGCCCAGTTCGATGCGTAGCACTGGG 4446115 32 100.0 36 ................................ ATAAATTCCACCCATAAAAAAACCCCGCTTGATGGC 4446183 32 100.0 34 ................................ ATCAAAGGCACGCTGGTCGGTGTCTTCCGGGTCC 4446249 32 100.0 34 ................................ GCGCATATATCTAGCGAAGTAATCTTTATTAGAT 4446315 32 100.0 34 ................................ GTCAACGCATCCGGTGAGCAGGCGGAAGTACTGC 4446381 32 100.0 34 ................................ ACGAACACGGGTATCGATACGCAGCGTCGCCCGC 4446447 32 100.0 33 ................................ ACGATACGGTAAGCACCGAGTACACACGTCGGC 4446512 32 100.0 34 ................................ CGAAGCGTTTTAGCGGGCACGCCTACCGAAGCCC 4446578 32 100.0 35 ................................ CTGGGCATGAGTCGAGGGGCTGCCCTTGTTTCGAC 4446645 32 100.0 34 ................................ GTTAACGGCTCTGAAGAAGCTGAGGTGCTGACCT 4446711 32 100.0 34 ................................ GCGAAGAGCTGGGTCTTGTAGACCCCACTGCTGA 4446777 32 100.0 34 ................................ TGCGACTTTGCCAGATGGGGTCGTGATGAATGGC 4446843 32 100.0 35 ................................ CAGTGATACATGTTGAGACTCGCTTAGCAGTAGGC 4446910 32 100.0 34 ................................ ACTGAGCTACGTGCTGGATAAAGATCACCTGGGC 4446976 32 100.0 34 ................................ ACTGAGCTACGTGCTGGATAAAGATCACCTGGGC 4447042 32 100.0 34 ................................ CGCAGGATACGGTTTGGCATGAGGACCCAGTAAC 4447108 32 100.0 35 ................................ TATGCAAGAGACGGCAACGCCATCAACTGCAAATG 4447175 32 100.0 34 ................................ TGTAAGGCCCCATTGACCAGCCGTGAAGCTCGCG 4447241 32 100.0 34 ................................ ATTCTGTCGGGGTGACGCTCGAACTCCTGATTTG 4447307 32 100.0 34 ................................ AGCACAGCGTTGTAAAGCGCCCTCTCTTTAGCAG 4447373 32 100.0 34 ................................ ACTGAGCTACGTGCTGGATAAAGATCACCTGGGC 4447439 32 100.0 34 ................................ ACTGAGCTACGTGCTGGATAAAGATCACCTGGGC 4447505 32 100.0 34 ................................ CGCAGGATACGGTTTGGCATGAGGACCCAGTAAC 4447571 32 100.0 35 ................................ TATGCAAGAGACGGCAACGCCATCAACTGCAAATG 4447638 32 100.0 34 ................................ TGTAAGGCCCCATTGACCAGCCGTGAAGCTCGCG 4447704 32 100.0 34 ................................ AGCACAGCGTTGTAAAGCGCCCTCTCTTTAGCAG 4447770 32 100.0 35 ................................ TTGTTAGCAAAACGCGGGGGCATGCCTGCAAAGCC 4447837 32 100.0 34 ................................ ATTGAAGAAGTGGCCGACGACGACTCTGGTGTTT 4447903 32 100.0 33 ................................ AACAGGAAGCCGCAGAACGCGAACAGAAAGAGC 4447968 32 100.0 35 ................................ AGACGTGGCAGATGAAGCGCGGCAACGATCTGGAG 4448035 32 100.0 34 ................................ TCATCTACCGCCTACATGCCGAGCAAGCTGTCGC 4448101 32 100.0 34 ................................ TCGCGGAACTCCTGCGATTTACGGAAAGCTTACG 4448167 32 100.0 35 ................................ TATGCATCTGCCCCCTCGGGCCTAGTCGAAATCAA 4448234 32 100.0 34 ................................ ATCATAATCGGATTCGTCATATGATTCGTCATAT 4448300 32 100.0 34 ................................ TGGCTGAGCGCGCCGTGGATTTAGCCGAGATTGG 4448366 32 100.0 34 ................................ AGCACCATGTAGCTGACGTTCAGCGTGTGCCGAG 4448432 32 100.0 35 ................................ CTTGATAGGGCGAACTGTGTTTACAAAAAGCTCTG 4448499 32 100.0 35 ................................ TCTCTGTCGCCTACTGACGCGGCTGAGTGGATCAA 4448566 32 100.0 34 ................................ TGAAGTATGGCAACATCGATATCGACCACAAATC 4448632 32 100.0 35 ................................ ATTGATCGCACCGACATCTGCGTTTGTGATCGCAC 4448699 32 100.0 34 ................................ GTCTCAAATTACAGCTATTTCAGAACGTTACCGT 4448765 32 100.0 33 ................................ CGCACTAAGTAGCGCATCAAGTTCGTCTGGAGT 4448830 32 100.0 34 ................................ TCAGCACCTAGATTACGACCCCGAAGCTGGTATT 4448896 32 100.0 34 ................................ CCGCACCGCATCCGTAGCGAGTGGTGCTATCACA 4448962 32 100.0 34 ................................ ATAACATCGCCTCATGTTATCGCCTTGAAGGAGT 4449028 32 100.0 34 ................................ GCTGTTAGTGGCGGGGTGCGCCTCACAGCCAAGG 4449094 32 100.0 34 ................................ AAAATAAAATATCAAGAGGAAGCAGGCGACGCGC 4449160 32 100.0 34 ................................ ATACTGTCACCGCGCCCGCGCCCGCGCGATTACG 4449226 32 100.0 35 ................................ ATGGGTAACTCCTAAAATGGGGCTGGGATTACCAG 4449293 32 100.0 33 ................................ AATCATGCCGCTGGTCTTGGGTAGGTAGGTAAC 4449358 32 100.0 34 ................................ TTGCTATAACCCGCACGGATAGCCGCTTGGGTAG 4449424 32 100.0 34 ................................ TCGATGTAGCGCGCCAGAATGGCCTCGGCTACGT 4449490 32 100.0 35 ................................ TGGGTTGGTCGCCAGAGCACTCCACCGATGCAGTG 4449557 32 100.0 34 ................................ GTCTCTGCTATGGCTGCTGGCACTGCATCCATGG 4449623 32 100.0 34 ................................ TATGAGCAATGCGATAGCAACGCTGACAGATGAC 4449689 32 100.0 34 ................................ CAGCTATCGACCGGATGCCCGCTTATTCGGGGCA 4449755 32 100.0 34 ................................ AGGGGTGCGGGCCTGCACGCCGTCAACGCGGACT 4449821 32 100.0 34 ................................ AGGCGTAGACTCGGGAATTATCTCTCTAAACGTC 4449887 32 100.0 34 ................................ CCGAATGGTGCGCGCTCTTTCCATGCAGCGCAGG 4449953 32 100.0 33 ................................ ACAGAATTGATTTAACTTGCGCGTCCGAATTTC 4450018 32 100.0 35 ................................ AGGTTGTCCATAGCCGCGCCGAACGCGCTAAATGT 4450085 32 100.0 34 ................................ ATAGCGCCTCGCGTTTTTCGGGCACAAAAAAACC 4450151 32 100.0 35 ................................ TCATCCACGACGCCTTCCACGCGAATGGTTTCCAC 4450218 32 100.0 34 ................................ TCGCTGCCGCTCACGCAGTGCTGCAGCGGCCATT 4450284 32 100.0 34 ................................ GAACCAGCGAGCGTCATGGTCATGGTCAAATCCC 4450350 32 100.0 34 ................................ ATAGTCAACGTCAATTCGACGAAAATGAAAGTCT 4450416 32 100.0 34 ................................ ATAAGAGGCTGCCGACCATGCCAGCGTCACTTGG 4450482 32 100.0 35 ................................ TATTTTGGCGGCATCTACTGGGAGCGCTATCGCGG 4450549 32 100.0 34 ................................ CTCTACAAGATGCCTGAAGACGCAACTGAATTTC 4450615 32 100.0 34 ................................ ATAAGAGGCTGCCGACCATGCCAGCGTCACTTGG 4450681 32 100.0 35 ................................ TATTTTGGCGGCATCTACTGGGAGCGCTATCGCGG 4450748 32 100.0 34 ................................ CTCTACAAGATGCCTGAAGACGCAACTGAATTTC 4450814 32 100.0 35 ................................ ATCGCTGGCTACCAAGTAGCCAACTGGCAAAACGA 4450881 32 100.0 35 ................................ TTATAGTCAGCCAGCAAAAGAAAACCTTTGAAGAC 4450948 32 100.0 34 ................................ GCCAGCGCCGTGCTCAGCAGGAGGGATCGTCATG 4451014 32 96.9 33 ...........T.................... TTCCACTTCACGCGCACAGCACTGGTAGTCGAG 4451079 32 100.0 35 ................................ TCAGAATAGCGCGCTTTCAGTTTTGCGATATTGCG 4451146 32 100.0 35 ................................ TCTGAAGATATGGTGCCGTTTAGCGAGCACCTGAA 4451213 32 100.0 35 ................................ GATCGACAAGATCGGCAAGCAACGCCTGGTTAAAT 4451280 32 100.0 34 ................................ CAGTGGCGCGAGATCGGCACAGAGGATTGGCAGT 4451346 32 100.0 29 ................................ CATTCATCGATGTCCGGCGGATCTCCCAG 4451407 31 90.6 34 A.A.-........................... TTGGCAGAGTCCCACCAAACGACCGCTTGGCACA 4451472 32 100.0 33 ................................ GTGCGCACCCAGCGCCGCATCAAAAGCCGCCGC 4451537 32 100.0 34 ................................ GATACGGTTTTCTTGTCCAAGCCACTCTTGGCCG 4451603 32 96.9 34 ......T......................... ACGTGATGCAAGAAACTTATTTGCTAGCTGTGGA 4451669 32 96.9 34 .................T.............. ATCAATACCTTATCGAGCGCTTCGAGGATCTTGT 4451735 32 100.0 34 ................................ TTCGGGGGTGAGCAGATAGATAGTGCGGGATTTG 4451801 31 90.6 0 ................A........-....C. | ========== ====== ====== ====== ================================ ==================================== ================== 102 32 99.7 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : TGGCCCGCTAATTAACAGAAGGAGCCAAACATGTTGGTATTGGTCACCTATGATGTTTCCTTTGATGATCCCGCAGGCCCCAGCAGACTCAGGCGTATTGCCAAAACCTGTGAGGACTTCGGAACACGAGTTCAATACTCCGTTTTTGAGTGCGACCTGGAGCCTGATCAATGGGTAAGGTTAAAAGCCCAGTTGCTGGATGTCTATGATGAAGAGGTGGACAGCCTGCGTTTTTATAAGCTAGGGAAAAACTGGCGTGGTAAAATTGAACACCATGGTGCCAAACCTGCGCTTGACCTATTCAAAGACCCCTTGATTATCTAAATGCTAACCATGAGTTCTCATAAAAACACACTTCGGTTAGCGTGCATCTATGTCACTGATCTTTAATAATATATTTACAATGATCACCTAAAGCATTGAATATCAAACGCAATCTTCCAGAGGTTAGCGAAAACCCGCCTCAGAAGGTAGTATTGATCAGCCTTTCACGAAAGGCA # Right flank : CGGAGATGTCATGACCATCCTAATTTGGCTAGGCCCGATCCCCGCACGAGCGGGGATGCACCGTATCGAATGCTGTTGATCGCACATGAAATGAGCCGATCCCCGCACATGAGGGAGGTATCGAAATGCTTGGCAAAGGCACCAAGTTCTCTGGCGTTACCTGATATGTACTCGACCTTAGAAGGAGGATGCTTCTTCGCGGGTGCGCTTACCCACGCTACTTGGTATGTGCTTGGTCTTATAAAGAGGGTTGCTGCTTCTTCGCGGGTGCGCTGACGCTTACCCACGCTACTTGGTATGTGCTTGATCTTATAGAGGGTTGCTGCTTCTTCGTGGGTGCGCTGTGTCAACGCCAATGAAGGTTGTCCAGGGGAAGTGCTGCCCCCCTATTGGGGTGTGCGGATGAGTTCGTTGTTGCCCAGGTGGCTACAGCTAGGTTTGAGGAATGCGCCCTTGGCACCGTTTCGCGCTGTATTTGCGGGTGCGTTTAAGGCTTACTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //