Array 1 31108-29937 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AJSV01000030.1 Haemophilus haemolyticus HK386 contig00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
     31107	    32	 100.0	    35	................................	TCTACAACAGGATTCGCTATTGCCGCCGCAGCATT  	
     31040	    32	 100.0	    34	................................	CACCTAAAAATGTTTCCAACACCATAAAATTTAG   	
     30974	    32	 100.0	    35	................................	GGTATGCCCTAACGAATAAAAGAAATCAGGCAATA  	
     30907	    32	 100.0	    34	................................	TTTTGGTTATGAAACACCTGACGGAATTAATAAG   	
     30841	    32	 100.0	    34	................................	GATTTAGCCCTAGAAACGACTTGTCCGCAATGTA   	
     30775	    32	 100.0	    34	................................	CATTAGATGCTGGCAATCCAGTAGCCGGATTAAT   	
     30709	    32	 100.0	    37	................................	ATCATAGGGATGATTTTGATCTCGATATTCGGGGGCG	
     30640	    32	 100.0	    35	................................	TGAGGAACGCAATTTAGACGACAGCCAAAAACGAG  	
     30573	    32	 100.0	    35	................................	TCCAATAAAGGCGGAGGAAGTGCGGGTGCAAGCCT  	
     30506	    32	 100.0	    34	................................	ATCGGATTAAGTTTTTTGCCATAACTTATGTCTC   	
     30440	    32	 100.0	    35	................................	CCGATGTGTGAATGATAAAAAATAAAAATTCGTTT  	
     30373	    32	 100.0	    34	................................	ATCTAATCGTTGCGCAAGTGAGCTGTGAGATAAG   	
     30307	    32	 100.0	    35	................................	AGAAAAGTCAGCGTAAAATCGCAATCTTCCGAAAA  	
     30240	    32	 100.0	    35	................................	ATGATCTAAAATGGCGAGAAGTGGAAAGAATAGAC  	
     30173	    32	 100.0	    37	................................	AGCTTGTTTGATGATGACACCAATCGAGCTGTTGCAG	
     30104	    32	 100.0	    35	................................	GATGTCTGGCAAGAATACGGCACATTTTTTCGTAT  	
     30037	    32	  81.2	    37	......A...T..G.T.....A..A.......	AGCTCATACTTTCGCATACGTTGGTTGGCAAGCTCGA	
     29968	    32	  78.1	     0	......AG..T..G.TA.A.............	|                                    	
==========	======	======	======	================================	=====================================	==================
        18	    32	  97.7	    35	GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC	                                     	       

# Left flank :   TTGATGAGATAAACTATGTTAATTCTGATTACTTACGACATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGCCGCATCGCAAAACATTGCTTAGATTACGGGGTTCGGGCACAATATTCGGTATTTGAATGCGATGTCACGCCTGATCAATGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACTCTACATGTGACAGCCTGCGTTTTTACCATTTAGGAAGTAAGTGGCGTAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGATGTGCTTGTCATTTAGTTCGCTAACCTGGTGTTCTCATTAAAACCCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACGATATGGCCGTTATACTTACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACGGTGTTTAATACGCTGATTTTTCTTGCTTTTTTATGTAGGGG
# Right flank :  GCTCACGCATTAAGCCAAGGGCAACCCTTACAACGCAGCTGTTTTAGCCAGCGTGCGTTAAAATAGTTCTGTTTTTTATTATTCAAATGTTATTTTTTTGTTAAATATATTTTACTTGAGTATAATGCTCAACATTATTCCTCACGGAAGAGAATCCGTAGAATAATGAGATTAATCGTAAATATAAGGAATAAAAATGGATTTCAATAGAATTATCGCTCACATGAATGATCATCACCAAGATGATATGGCTGCCCTTTGTAAAAAATTTGGTGGTGTAAATGAAATTACGGATGTGACATTAGTTAATGTAGATTTTGGTGGTTTAGATTTTAAATATAATGATGGCAAAACATTACGCGTAGAATTTCCGCAACAAGCTGACGAAGGTTCAATTAAACAAGCGATCATCAATCTTTGTGTAGAAAATAAACCAGTTGCAAATTACGATCGTATCAAAGCTAAAATTGATGAATTTCGTCAAGAGTTTAAAAGCTGTG

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.40,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [13-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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