Array 1 249184-253111 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJUI01000004.1 Klebsiella pneumoniae strain EuSCAPE_TR283, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249184 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249243 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249304 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249365 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249426 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249487 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249548 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249609 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249670 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249731 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249792 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249853 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249914 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249975 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250036 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250097 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250158 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250219 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250280 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250341 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250402 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250463 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250524 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250585 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250646 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250707 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250768 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250829 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250890 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250951 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251012 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251073 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251134 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251195 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251256 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251317 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251378 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251439 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251500 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251561 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251622 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251683 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251744 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251805 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251866 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251927 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251988 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252049 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252110 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252171 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252232 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252293 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252354 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252415 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252476 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252537 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252598 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252659 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252720 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252781 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252842 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252903 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252964 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253025 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253083 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //