Array 1 48657-43978 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOLG01000031.1 Haloferax prahovense DSM 18310 contig_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================== ================== 48656 30 100.0 36 .............................. TAAATGCCAACCAAAGACCAACTGGAAGAACGAATC 48590 30 100.0 37 .............................. CACCTATCCAGAGAATCACGGCGTCTCTAGGTGACGA 48523 30 100.0 35 .............................. GACCTCTCGACAATCCCCCCGGGAACCTACGCCTG 48458 30 100.0 37 .............................. AACTGATGGAGGTAGCCCGTTGCTTGGGGCTCGACAG 48391 30 100.0 35 .............................. GACCTGGGCAGGAGACTGGTCGGAGCCGATTGGCC 48326 30 100.0 36 .............................. TCGCGAAGGTCTCGAAGGGCTGACTTCGGAACCGCA 48260 30 100.0 36 .............................. ATCGTCGACGACGGTTCGGACACAGAGACCATATCC 48194 30 100.0 35 .............................. CCGATGGTCCTGCTGACCGGGAGGACGAACCGCCC 48129 30 100.0 36 .............................. ATAAAACTCGGTCAGACCGACTTCGACGGCAACCAA 48063 30 100.0 37 .............................. GAGTGTTGGTGATGAGTAGTTCAGTATCTCTCCACCG 47996 30 100.0 36 .............................. AACATCGTTGCCGGGCTCGTCCTCCTCGGACTCGCA 47930 30 100.0 36 .............................. CACCCGAACAGAGGGGGGTCTGCGCGTGAGCCTCGC 47864 30 100.0 35 .............................. CTAGCGCGATGTGAGTCAGCCCCCGCCCGCCCCGT 47799 30 100.0 35 .............................. TTGTCCACAGTATTACTGGCATCGTCCTCGGTCCA 47734 30 100.0 36 .............................. CGATAATCCCCGCCATCGTCGCGATAAGAATTAACA 47668 30 100.0 37 .............................. AACGGTTCGGCCCTTCGGAGGTATCCTAACAATGGGA 47601 30 100.0 36 .............................. CGGAGTTAAACATCACGGCGGATAGGTTCAATTTCG 47535 30 100.0 36 .............................. TGCCCTCCGACTTTTTTTCATACCAATCTCAGACAG 47469 30 100.0 36 .............................. CACGGTACTGGTCGAAGATAGTACGCTAATAACGCT 47403 30 100.0 37 .............................. TTGCTGCCGGTGGGAATCGGTGCTGTCAATGGGGACC 47336 30 100.0 35 .............................. ATTCTGCCGCAGACTACTTGAAATGGTGAATGACA 47271 30 100.0 36 .............................. CCAACCATCCACGTGGTAGCCGAAGTCGCGTACAAC 47205 30 100.0 37 .............................. ATGATTCACCTTCGATGTATCTGCAAAGCTGAATCGC 47138 30 100.0 36 .............................. GGTCGGCGAATCGAACCGACCATAGAACGGGTGGGA 47072 30 100.0 37 .............................. TGCCCGTGGTGTCGTTCAGCTTGTCGTCGCTCTCACG 47005 30 100.0 37 .............................. AAAACTACCCCTCACCCGATACGTGTTGCCCCGAGAA 46938 30 100.0 36 .............................. AACGACCCGTCGTCTGTCGACGTTCTCGAGTCGTTC 46872 30 100.0 35 .............................. CCACGACAGAGTTGGTTCTACGATTTTCTGAGGCT 46807 30 100.0 38 .............................. TACCGGATGATGATGGCTCGTCACGAGACATCGCGCTC 46739 30 100.0 36 .............................. GACTGCGTCCTCGTTGTCGGCGTTGATGTCGTACTC 46673 30 100.0 36 .............................. TTCGAGAGCCCCGAGTCGGGAGTCGTGACATCGACC 46607 30 96.7 0 .............................N - Deletion [46578] 46577 24 80.0 36 ------........................ TTCGAGAGCCCCGAGTCGGGAGTCGTGACATCGACC 46517 30 100.0 34 .............................. CTCGATGCCGGGAGACCGCTCGCGAGTTAGAGGG 46453 30 100.0 37 .............................. CCCCCGTTAGCAACCGCGAAATCAAGCAGTTGACTTA 46386 30 100.0 35 .............................. GAGGAGTTCGCCGACAACGTCGCCGCCAAAGAGGG 46321 30 100.0 35 .............................. TGGTCGGCCGCTGTCTCGGAGCCGTCGCTGACGAG 46256 30 100.0 36 .............................. TGACAGAGTAGAAAGTATTAGAAAATGTCAGGGACT 46190 30 100.0 35 .............................. AAGGCGTACGCCGCCGCGAACGACTACGACATCTC 46125 30 100.0 38 .............................. AAGACGGCGCGCCAGCACCTGAACCAGCTCGTCCTCCA 46057 30 100.0 36 .............................. GACGCGGCCGGTGCCCCGACGACCGAGTCGGAACTC 45991 30 100.0 35 .............................. CATTCACGGCGGAAGGCGATGAGACCGCCCCAACG 45926 30 100.0 34 .............................. CCCGAGTGAGTGTAGCGGACCATCTCGACGACGT 45862 30 100.0 35 .............................. CTCACAAGTCGATCAACATCGTCATCGGGACGCGT 45797 30 100.0 38 .............................. TGAAACGTCGCCCGCGGTGAGCGCCGAGAGGATATCCA 45729 30 100.0 36 .............................. TCAATCCCCCACCGGTTCCCGTAGTTGCGAACCATC 45663 30 100.0 35 .............................. ACAGACGACCACGGGCGTGGGATTCGATGGCGAGA 45598 30 100.0 35 .............................. CTAATCTCGTCGAGGGCGTCCTGAAACGCTTGGCT 45533 30 100.0 53 .............................. TTCGAGAGCCCCGAGTCGGGAGTCGTGACATCGACCGTTCGAGACGCACCCTC 45450 30 90.0 36 ..GG.N........................ TTCGAGAGCCCCGAGTCGGGAGTCGTGACATCGACC A [45445] 45383 30 100.0 36 .............................. GACCTCCCGGCAGACATCGACCTCGGCGGGGCGACC 45317 30 100.0 36 .............................. TTAGTCATGCTTCGGTCTCCACGAAGCCCGGTCGGG 45251 30 100.0 36 .............................. ATCCGACACCATACGACGTTTTCACTTTCATGTCCA 45185 30 100.0 33 .............................. GCAGAGTCGAGGGCACTCACTGGGCCCGTGACG 45122 30 100.0 35 .............................. GAACTCGAAACAGGTGACATCGTCCGCGAGGGCGC 45057 30 100.0 36 .............................. CCCCGTTCGTAGACCTTCTGACAAACGTCGTCGAAC 44991 30 100.0 37 .............................. CACACATTTCACACATCGTGACTTACCAATGACTTGC 44924 30 100.0 37 .............................. TTGCACCGTTTGGCCGACGATGCCCGGCGTGTCCGGT 44857 30 100.0 36 .............................. GCGCTCGCCTCGACAAGCAGTACCGTGAGCAGCAGG 44791 30 100.0 36 .............................. TTCCTGTTTCTCAGGACCGCGCAGTATCTGGCAGTC 44725 30 100.0 34 .............................. ACCTCGCCGCTGTCGTCGAGCGGGCCAACCGGTC 44661 30 100.0 35 .............................. GACTACGGCGGCGGCCAGCACGCCATCACGCTCAA 44596 30 100.0 37 .............................. CTCTCACGGAGGTTGGCCTATGAGTTTCTTTGAAAGC 44529 30 100.0 34 .............................. TACCGATCACACACTGTATGGCTGGTGGACGTTT 44465 30 100.0 35 .............................. ATTTCGACGCCTCCGGCGTGTCTACGAGGACCGTC 44400 30 100.0 34 .............................. ACCTATCGGCGGCGGCTCTGCGTCGTCGCTGGAT 44336 30 100.0 35 .............................. ATACGAGAACCCGAGACGAGACGCGAAGTTGCCGT 44271 30 100.0 36 .............................. GCGGGTATGCAAGTGGCCTAAGCGAGGCGCAAGCCG 44205 30 100.0 37 .............................. GCCAAAGCGACTCGATCGCGAGCTACATCGCCTACCC 44138 30 100.0 36 .............................. GAAGAAGTCGCCGAGTACCGCGGCATCACCGACACC 44072 30 100.0 35 .............................. GACGAACACGGCCTATCCCCGTTCTTCGCCGCCGA 44007 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================================== ================== 72 30 99.5 36 GTTCGAGACGCACCCTCGTGGGATTGAAAG # Left flank : AACTATCAAACACCGATCGCTGAATCGCCATGTCAGCTACAAATACCTCCTTCAATTGGAAGCGTACAAACTCAAAAAACACGTACTGGCAGGAGAGCCATACGAATCATTCCGGCGGTGGTGGTGAGTGGTACACTTAATCGTAATATACGATGCTAAAGCAGAGCGAACCCGTCACTATCGTACGTATCTCCGACGACACCTCACTCATCTCCAACAGTCTGTCTTTGAGGGAGACGTCACAGCGGGAACTGCGGACGAGATTAGAGAAACGATGGACGGGTTAGTGTCTGAGTCGGCGTACGATGCGGCCGTTGTTTACGAAGTGTCGTCTCAATCCTACCTCAAGCGCGAAGCTTACGGTGACGATCCAGCAGATGATAAGCACATTCTGTGACTTGTTCAGTCGACCCCCCGGGGTTTGACGGTTATCGAGAGTCGACTGATGGTTGAACTCGCAGTCGGTGGATATATGGCCCATACCCTGGATATTCTGGTGG # Right flank : TACGAAGGGGCGTACACACTCTCAGCCGTAGTGAAGGTTCGAGACGCACTTCCAGCCGGACCGTAGACGGGTTGAAGCGAATGAGTGAAAACGACACGGTTCAAGTGAGAGAGCTTCCAGCAGGACCGTAGACGGGTCGAAGCTGGGTTCTTGTCAAAGGCCGTGGTCTTGCCCAACCATCTTGCTTCGTACTTGGCCTTCGCCTTGTCGTCGCTATTACCAACTACGAACGAGGAGACTAGGAAGTACGATCACCACAGTGTGAGCAGAGTGGGTTGCACGTTCATTGCGATGACTGCGACTCAGCCGGGAAGTACGATCACCACAGTGTGAGCAGAGTTCTATGACACCTCTAATTCAACCCATGAATCACCAACAACTGCTGGTGCTTCCGAGAATTACCCACAGTCGAAGTAGGACGAGATCACCGGCCTGAAAGATACCCCCTTTGCCTGTAGAATAGCCTCGGGTTGATCGTCAAAAACCACACCCTCACATTT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAGACGCACCCTCGTGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //