Array 1 1655607-1656062 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1655607 29 96.6 32 ............................A ATACAGACACGTCACGTGCGGGACCGTGCTAA 1655668 29 100.0 32 ............................. GTCCGCGTTGCGGAGACAGGATCGGAAAACAC 1655729 29 100.0 32 ............................. GCCTCTTCGGACCCGAGCGGGCCGATCAACCC 1655790 29 100.0 32 ............................. GTACCAGGATAGGCAGCAGCGGCCCCAACACC 1655851 29 96.6 32 ...........A................. GACCGTGCGGACGCAATGGGCGTCCTCATTCG 1655912 29 100.0 32 ............................. ACACCGATTACGGGCAGAGTCAAGCAGAGGTA 1655973 29 100.0 33 ............................. GCCGGTGTGCGGTTGGTGGAGACGATCGGCGAC 1656035 28 93.1 0 ........................-.T.. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 98.3 32 CTGCTCTCCACGCACGTGGAGGTCTACCG # Left flank : ACTCGGCTGAGAGCGGACAAAATCGGATTCATCTTCCAATCGTTTCACCTCATGCCACACCGCACGGCCAGCGACAATGTAGCGATGTCTCTAGTTTATAGGGGCATTCCACGTCGTCAGCGCCATGCGATCGCGGAGGAGAAGCTGGATCTGGTCGGGCTGTCACACCGCGTTAATGCGCTGCCCACGACATTGTCGGGTGGGGAACGTCAGCGAGTCGCGATCGCCCGCGCACTGGCTACCGAGCCGTCGATGTTGCTATGCGACGAACCGACCGGAAATTTGGACTCCAGTACCGCCGCGTCCGTGATGGAAACGATCGATCGCCTCCATGATGAGGGGTTGACGATTCTCATGATTACCCATGACAAGGACGTTGCGGATCGGGCGCAGAGAGCTGTGACGATACGAGACGGTGAACTCTTGGAAGGACAGGTCGCGTTACGGTGAGCCTCGGCCAAAACGTACAACGGTCCTAGTAAAACCGCAGGTCGATAAGT # Right flank : GACTATTCGACCCTCAGGTTCTGCAGAAGCTTTTCGTCACCGATGCAGTCGGTAATGCCGAACGGCAGCCGTCCGTGCAAGGCCAGCGCTAGGTCGGAGGCGGAGCCGGCTACGCGGGCTTGCAGTGAGCTGTCGTGGCGTGGTTCCTCGCTCAGAATGGCGATGGTTCCGCCGTGGAATCGGCCGAACCAACTGCGGTCGGCGTCCTGGGCGAACAGCTGCACCAAACCTTCGCCATGTGGATGGGGGTGTAGACCACGCCCGGTAGGGAGGAACGAATCAAGTGCCTCTTCAATGGTCGCGACGGCAATGGCCTGTTCGAGGGGTGCGGTAGTTCCTTCAGCCATCTGAACGTCCCAGCGCGCCAGAGCGGTGATCACCGCGCAGCGCCGGTACCAGAAGATCGCCTTGTCGCTGACCGGTGACCAGCTCCAGGCCGGTGATGCGGCGGGGTGTTCGGCAAAGGTCCGCAGCAGTCTCAACTCCGACGTGCGGAAGTC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCACGCACGTGGAGGTCTACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1804392-1804539 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ===================================== ================== 1804392 25 100.0 37 ......................... ATTTCTGGTGGCGACACGATCGATATCGACCGGTAGC 1804454 25 100.0 36 ......................... GATCGTCCCACCTGTATAGGAGCAGAGACGTAGTAG 1804515 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ===================================== ================== 3 25 100.0 37 CCCCCGCCCACGCGGGGATAGCTCT # Left flank : GGTCGTGTTTTGAGGCCAAACCGTTCGACCAGCTCTTTATTGGGAACCTCATTGCCGTCGAGAGCGGCTACTCCAATGAGGAGGTTGTATTCGGGAATTGTGACATTAGTGAAGTCTGACATTAGATTTCTTTCACAGGGCAGGTAAAATACCGGTTCTCTCAAAAAGCTAGCAGTGCCTTGGAGAAAAGTAAACGGCTACTTGTCTCCAAGGCGTACTTGAGTTCCGGTTACGTCGTGATACCGAATGCGGGGAGTGCTCAAATCGGTTTCGTGGCATTGCTCGCGCAAGTCGCGGTGAAATCGGCGGATCCGATGGCAATGGTCTATAACCATCAGCTCTAGTTTCATTCCGCTACTCATCGAGTCTGAGTGAGTACCGACTGGGCGCGACCATAATCCTCAACCGATTTCGGTATTAAGAACCCCTGGAAGCCCTTCAGAACGCAGGTGGACTAAAATCGACTAATGCTTCAGTGGAACTGCAGGTCCTGAAGATAG # Right flank : TAGTTGGTATGCCTGCACGCATTCTGCGAGGGTCGACATCTGGATGTGAATACAAATCTAAGGATGTCGGCTTTGATGCTTGAGCACGGCAGATCCGGGACAGACCTATTTCCAACAACCCGCTGCTCTGGACGTCAGGCTTCCGACTGGGTTGTAGCAGTTCATTCTCGGAATTCCCGTTTCCTGCCAGGCGTGAGTTATGCATTGTCACACGTGGTCGATACAGTGCTGGTATGGCAGCGAATATACCTGCAGGACACGACATTCGAGATAGCAACGAAAACCCCTTCATTCGTGGGCTGGTCGGGGCGCTATGGGGTAAGTCGGCTAAAAAGGCTGGTGGCCGTACGAATCTGCTTATCGGGCACATGCTTGATACCGCTGCTGTGGCGGAATTGATCTGGGACCAATACCTATCAAGGGGCCTGAGGCGACGGTTTGACCGTTTTGCTGGTGGACTGGGCCGAGGTCGGAGATTGTTTGTGTGGTTGTGTGCGATT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCCGCCCACGCGGGGATAGCTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 1814416-1814144 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1814415 28 96.4 33 ...............T............ CGGTCTACCCGGTACGAACCGGTGGCGTGAGTA 1814354 28 96.4 33 ...............T............ GGGGATTGTCGTCATCGCACTGTTGGGTAGTGG 1814293 28 100.0 33 ............................ TCTACAGTTCCCACATTCCCGCCGTCGTGCCGA 1814232 28 100.0 33 ............................ GTCTGCGCGCTTGGGTCCGATTTGCCGTGCCGG 1814171 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 98.6 33 GAGCTATCCCCGCGTAGGCGGGGGCTAC # Left flank : CAGCGGTCGACGGTACGACGTCCGAATCGGGTGCTGGTGGTTTTCAGAGCCTGTCGGACACACTGCGGGACGACCGAGTGACGGTGGAATACCGGCCTCCGGACGTGTTGGCCAACTGCGCCAACCCACTCCGGCCGACCATCGTGCTCTACGATGACCGGCTGTTCCAACACACCGTCACTGACACCGCCTGGATCGACCGACTGGCCCACACGCTATATACGGCCGTGTCGCCACACCTCGATCCTGATCGGACAACACCGAGAGGGAGCGTCGTACCGGGGCCACGCCGCCGGTGGCGCCCCAAATGATCCCGTCACTAACCAACGAACCCGCGCCGGGTCAACGCGTCCGCCACTGTGCATCGCGTGAGGATTCATGATCTTTACTCCCGGTTCTCTCTCCTGGTAACCGGCGCTGTAGGAGAGAGAACCCCGGTCCTGTCGGGGCTCTGGTAGGTGGGCAGCCCCGACAGGACCCCACCACAAAATGAGCGACCT # Right flank : AGTCGACGACCTGCACCTCCATCACGACTTTGACCGGTTTTCGTCCGCCTCTTTTTCACTTGGCCCCTAAGGCTCGTGCGGATCTCTCGGTCGGGCCAACAGTGTCAAGCCGTCGAAGTCAGTTGGTTTCCAACGTTCGCGACCCGCAGTTCGAAAAGCACAATCCTGTTCAGTCGCAGCCGGCTCAATCATGACCGCTTGGCCATCACCAATCCGCGCACGGGTAATTTCCCATATATAATCGCGCACCCGCTTACTAACAGTGCCGACGAAAATTCCGGCTGCAACTTCCAGAAGCCATCTTGTCACGTGCCCGCGCAATCCTCGAGGCGCTGCGATGAGTACGATGACCGTCACGACTCACCTACCTCAGCGGCATGTCCTGTTTGACCCAGAATATCGAGATGGAACTCGTCGAAGACATCCCAGTCACCCCAATTGCGACCACCATCTACGGTCTGATCACCGTCGCCCCAAATCTCGTTTCGATCCTCATTCTC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCTATCCCCGCGTAGGCGGGGGCTAC # Alternate repeat : GAGCTATCCCCGCGTTGGCGGGGGCTAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 4 1825354-1825748 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1825354 28 100.0 33 ............................ CCGTTGTCCGGATCGAGAGTGGAGAGCAGGGCA 1825415 28 100.0 33 ............................ GCCGCCGAAATCGCGCGAAAGCGACAGGCGGCC 1825476 28 96.4 34 ............A............... TGGCGCGGTGGTGTCCGTGATGATTGGTTGTCGT 1825538 28 96.4 33 ............A............... TTCGCCGAGATGGTTAGCCAACTCCTACCTGGA 1825599 28 100.0 33 ............................ CTCCCTCGTCAGACGGCCTGGACAGTGTGGACC 1825660 28 92.9 33 .......T....A............... CGAGACGATGTGGGTACAGTGGTGCGTCCACGC 1825721 28 89.3 0 ............A........T...G.. | ========== ====== ====== ====== ============================ ================================== ================== 7 28 96.4 33 GTAGCCCCCGCCTACGCGGGGATAGCTC # Left flank : GGGTTCGATTCCGCGTTCCACGAGCAGTACGTGGAAGGTTGAGGCGCGCAGAGTGAGAATGACGAGGTCGACGGCTACGAGTACGGCGGGTGGTGTCCATGGTTGTTCGTTGTCGGACAAGAAAATCTCCTTTTACTGTCAATATGACAATAAGTGTAGGGTGAGGATTAAGCCGAATGCAACCCCCTCAATGCCCTTGGATCGATTCCGTCCAGTCGTCGGTGGTTGTTGAGCGGTGTGGGTAATAGGCGAATGTGCGACAATATGTGGGAACTATCCGTGCGCGGATTGGTGATGGCCAAGCGGTCATGATCGAGTCGGCTGCGACTGAACAGGATTGCGCTTTTCGAACTGCGGGTCGCGAACGTTGGAAACCAACTGACTTTGACGGCTTGATGCTGTTGGCCCGACCGAGAGATCCTCACGAGCCTTGGAGGCCAAGTGAAAAAGAGGCGGACGAAAACCGGCCAAAGTCGTGATGGAGGTGCAGGTCGTCGACT # Right flank : CGTCGATCGAGCGATGCCTCCGGCTGTCGTTCCTTCTGGCCTACTCACCGGATTCCAACCCTGACGACCCGGTAGGAAACGTGTCAAGAACCAAGGCGTCGCGCTCCCTACCTTGCGTATGGCATCGGAGTCGTCGCAGGCACTGATCCCCATCACGGCGGGAATGATGTCATGGAATGCTTTGGCCGCTTTTGGAATCGGTGCGGGGATATCAACATTCGGGGCGGGAATGGAACTCGCCGTGTTCGTATTCGTGGTCTGCGGTGCGGCGACGATCCTCGTGCTGGTCAATGCGCGTCGTCCGGCCCTGAGGTCGCTACAGGCCAGGGTCGACGGTTGAGGGATTGGGACTTAATGATGCGGCGGATAGCGGTGTGGGGAGCTCTACGAACGCGTCCCCACACCGAAAAGACTATTCCGCCAGGTCCAACTTCTTCAGGACGCGACCGACGTGGCCGGTGGCTCGCACGTTGTAGAGCGCCTGCTCGATCCGACCTTCC # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCCCCCGCCTACGCGGGGATAGCTC # Alternate repeat : GTAGCCCCCGCCAACGCGGGGATAGCTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 5 2512362-2514613 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2512362 28 100.0 32 ............................ CCGACGAGCAGGGAGCCTGGGACTCATACAGC 2512422 28 100.0 32 ............................ TTCACCGGCGGCGGTGCCTAAAATGCCTGCTG 2512482 28 100.0 32 ............................ CAGGTGAGGTTTGCTTCCAGAAACAGCACTAA 2512542 28 100.0 32 ............................ CAACTGTGGGGCGCGTAGCGAGCGTTCTACGG 2512602 28 100.0 32 ............................ CCGAACTCGACGAGGAGGCCTCCTAATGCACC 2512662 28 100.0 32 ............................ GCGCGATCGGGGTCGATCCATGGGCGGGAGAT 2512722 28 100.0 32 ............................ ATCCGAAACGGTCGCCTGCAATTGACGCGCTA 2512782 28 100.0 32 ............................ TGGACTGAAGAACAGATCCGTGAATGGTATCT 2512842 28 100.0 32 ............................ ACGGGGATGCGCAACCGGTCGACGGACACGCA 2512902 28 100.0 32 ............................ TTGTTAGCCTCAGTCGGTTGCCGCCGATCTGG 2512962 28 96.4 33 ...........................A GTACGAGGTTCAGCTTTCTCGTCAGCCTGACAC 2513023 28 100.0 33 ............................ CGGCAGCAATCAGCGCAATGGGCGAACTCACGG 2513084 28 96.4 32 ...........................A TCACCGCACACCGAAACAACGACGAAATCATC 2513144 28 100.0 32 ............................ CTAACCCGCGTTACCTCGTCGGAGCGCTGGAA 2513204 28 100.0 32 ............................ TACACGAATATCCCCACCGCCGAGGACAGCTA 2513264 28 100.0 32 ............................ TAACGCCCCCGCTAAAGAGACGACACCCGACC 2513324 28 100.0 32 ............................ CAACTGCACCGGCAGCGAAAAAACAGGCCGTC 2513384 28 100.0 33 ............................ GAAGCGACGTCGATTTTGGCGACCATCCGCACC 2513445 28 100.0 32 ............................ AGAGGACGTAAAGAACTCATGGATTACGCGAA 2513505 28 100.0 32 ............................ TGACCCCGCTACCTGGGATTATGGACGGCTTC 2513565 28 100.0 32 ............................ CCCAGCAACGGTTGGGGTGGGAAGATGTTGCG 2513625 28 100.0 32 ............................ GGATAACGGGCAATAGATTTCTCGACGCCTCC 2513685 28 100.0 32 ............................ TCACGGTTGGGGCACTGGATGAGGGAACGCGG 2513745 28 100.0 32 ............................ GCCGCGATGTGCAGGGTGACCGGCGAGGCCGG 2513805 28 92.9 32 ............A..............A TGACCTACGGCGAAAACCCAAATCCCCATCTC 2513865 28 100.0 32 ............................ GGTGTCACGATACCGTCCCAGTGGGAGGCCGA 2513925 28 100.0 33 ............................ GCGAAAATGTTCTGGTGATCACGCGCGGATGGC 2513986 28 96.4 32 ...........................A CGAACTACTCGTGTCTGGCCTGCTATCGCACC 2514046 28 100.0 32 ............................ GCGGACCTTCGCGCCTCATGCGCGCTATCACC 2514106 28 100.0 32 ............................ TCAGATCTCCTGTGAAATACCATCAACGCCAC 2514166 28 100.0 32 ............................ GGACTACGTACTGTACCCCTAGCCCCTAGCCC 2514226 28 100.0 32 ............................ GAGTTGAACACGTTGACCGATAAGCACCCGGC 2514286 28 96.4 32 ........G................... GTATCAGCCGACCGCGTTGCACGCAGTTGTGA 2514346 28 100.0 32 ............................ CGCCTCAATCGCCTCCAGCTCGATCGGATGCC 2514406 28 100.0 32 ............................ GCGCTCAAAGCCGCCGACGCGGACACGATCAT 2514466 28 96.4 32 .........G.................. TGTTTCTGGAGTTCCGGCTCCAGCTCCGTTGA 2514526 28 96.4 32 ...........A................ CAAGCCCGCGACGACGCCGCCGCGGACGCCGA 2514586 28 92.9 0 ......................A..T.. | ========== ====== ====== ====== ============================ ================================= ================== 38 28 99.1 32 GAAGTCCCCACGCAGTGGGGGTGAACCG # Left flank : TATTGACGCCGGAAGAGGGTGTGGAGGATGGTGTACATGAACGGTCACATCGCAACCTAGTTCACCTATGGGATCCAGTCGTAGGCGCTGTTGAAGCGGGTCGCAACTACGCTGATTAGGAGGAAAATCCAGAATGCCGAAAATGTGCATTATTTCTACAACAGCAGTGCCTGACCATGTTGAAGGGGCCTTGCGACGCTGGATGATCGAGCCTATGCCGGGGCTATTCGTAGGGGCGATCTCTGCACGAATACGCGATCAACTTTGGGAGCTTGTAGCAGAATCCGTTCAGGACGGTGCGGCAGTGCTTATACGGTCAAACAAATCTGAACAGAATTTTCTCATGGAAACAGCAGGGGAGCGGCGGCGATCGTTGGACGATTTCGATGGCTTGACTCTTGTTCGGTTTCGAGGAAATCAGTCGGATCTTCAATCAGACTCAGCAGTGCCCTGGTTATCACGAAATGATAACGTAGCTAAGAAAACCCAGGTAAGAGAGT # Right flank : GTATACGGCGGTGTTTTGAGTTGCTGTTATCGGGGAATCCTCGTGATAGGTTGAATGAGGTTCATGTGTTCGGACCGGCACCAGCCGCTGTTGCAATGTCGCATTCGACAGCCCGCACCGGAATCCAACGAAACCACGTTGGAGCCGTGATAGCTCAGGCGTCGCTTCACCACGCCGAATATGCCGCAAGATCGCGTCAATTCGTCCACAAGGATTGATGCGAGATCCCTCGCAATACGACAGGAACTCAGCCAAGCCACGGGTATAGGCATCGATCGTCCGAGTGACACGCCCCAAATCGATTCAAATCCGCAACCACTCCGTCGCCTGCTCACATCGAGTGAGTACCAACCACCGCTCACCGAAATCATCCACACCGAAGTAAAAGAGCCTCACAACCGCCCGGGCACGGGAACTGAACAGGGTTCATGCGACCGCGTGATTCCACGTAACGAATACAGTCATTGACCTGTTTTCGCGCAGTTTGGAGGGTTGGTCTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCCCCACGCAGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 2515712-2516342 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZUQ01000001.1 Haloglycomyces albus DSM 45210 HalalDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2515712 28 100.0 33 ............................ TCTTGCATCCTGAGCTGGACAAACGTGTGTCTA 2515773 28 100.0 32 ............................ GTGTTTGTGCCGGTCATCATGCACGACGGCGA 2515833 28 100.0 32 ............................ TACACACCCCCAGCTCCCGGATCTCTGAACGT 2515893 28 100.0 32 ............................ CCAACATATCGACAAGCACCGCCCGGGTTTTC 2515953 28 100.0 32 ............................ TACTTGAAAATTCGGATGCGCCGCCAGGAGTT 2516013 28 100.0 32 ............................ TCCAGCCGTGCCCAAACACTCCACCGCCGCCA 2516073 28 100.0 32 ............................ ATAGGGTGGATAATGAGGGGGCCTTCCCTTCC 2516133 28 89.3 32 AA.........A................ CTACCGTATGATGCGATCACCGGCCATACGCC 2516193 28 92.9 32 .A.......................G.. AAAGGCGTTCCCACCGTATCCTGTGTACCTGC 2516253 28 82.1 33 .A..C......ATC.............. CTTGCCAACCGTAGCAACGATATCGCCCTCACA G [2516269] 2516315 28 78.6 0 ......T....ATC..........G.T. | ========== ====== ====== ====== ============================ ================================= ================== 11 28 94.8 32 GTAGTCCCCACGCAGTGGGGGTGAACCG # Left flank : GAGGCCAATACACAGTACTCCATTTTGGACAATATTGTGAGCGAGAAGAAGTGATATGCTCGCGCGGGCGCGTCGGATCATCTGCCGACAACGCGTTGGCAGAATCGTTTATCGCGTCATTGAAGCGTGAAGTTATGGGAGACAGCAAGGTATCCGTCTCTGCGGAGGCTACTGAGATGGAGGTCTTCTCCTGGATTGCCAGGTACAACAACATACGGAGATACAGCGATTGGGAAATAAGAGTTCCATCGCGTTCGAGAATCAATCAACTATCATGGAATAAACTATCTGAATTTCTGTCCCTTTTCAGGGGGCTCCCTGATGTTGGTGCACATGTTGTGGAGTGTTTCGCGGTGTTGTTCGGCGGTGATCGTTGGATGTTTTGGGTGGCCTGGTCTTTAGTAGGGATTGAGGAAGCGGGTTGGGTTTCTAAACTGAGTGAGTGGTGCCATGGCTATCACGGAATGGTAACGTTGCTGGGGAAACGGAAGTCAGGGAAT # Right flank : GGAGACTCTTATCAGGCAAAGCGGGCGCCAGCCCCATTGATAACCAGAACAGGTGAATAACACCGCTGATGTCGGTTGTAGCGATGGCAAGGGTAGAGTGGCTGGACATGTCAGTCACCCTCTTGTGGAGCGGTCCTGGAGCTACTTAGCGGCTGAGAAGTAGACCAGTTCGCCCCAGACTTCGATCTGTTCACGAGGCATCGTAAAGACCTCGGACGCGGCTTTGGACAGAAATTCGAGGCTCACCGGCTCGTCAAAGGTGACGGTGTAGTCACGCATCAGCCCCTCCCCTTTCTTTGGCTTTGCCTATGCGAGCTTGTGTCCAGGTCGTCAGGCCCAGGCAGGCTGCCTCGTTGGGTACCGGCCTTGCCAGGCGGCAGCTTGGGAGCCCCGGGGCGTTACGTTATTCGCTCGGACGCTCCGGCCAGACTGCCAGTTCTCCACCTGGCATGCACTCGATTCGTTGCCCATACGGACCAACGACGCCCCACGATTCGAAA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTCCCCACGCAGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCATGTGGGGGTGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //