Array 1 229412-228593 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NMXC01000003.1 Klebsiella pneumoniae strain CVUAS 11269 NODE_3, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    229411	    29	 100.0	    32	.............................	CCTCAATATTGGGATTTACTGATTGAATTGCG	
    229350	    29	 100.0	    32	.............................	GCACACCTCAAAATACTGTTAATATATACAGT	
    229289	    29	 100.0	    32	.............................	ATTTAAAATCTCCATTCAGTTGTGTTCGACAA	
    229228	    29	 100.0	    32	.............................	GTCATATCATGGACGTCAAGCGGCATTGACTT	
    229167	    29	 100.0	    32	.............................	GAGGCAATCAGGATTACATTTACCGGACATAC	
    229106	    29	 100.0	    32	.............................	CGTGGCGGGTTGACCAGATCGGCGATCTGCCC	
    229045	    29	 100.0	    32	.............................	ATTCCTGCGGGACCTGATAATAAAAAGGTCAG	
    228984	    29	 100.0	    32	.............................	TACGATAACGCGCAGCAAACAGGCTATATCAC	
    228923	    29	  96.6	    32	............................C	GGTCCAGTTTGGTTCTTTAGGGCGAACTACCT	
    228862	    29	 100.0	    32	.............................	AAGGTACTCCATGTTTTTCATAAGCGGTATCA	
    228801	    29	 100.0	    32	.............................	GCGGGAGTGCGAACCGCCGTCCCCGTTATTGT	
    228740	    29	 100.0	    32	.............................	TAACAGGGCCATTTTCCCGGGTTGCCAGACGA	
    228679	    29	  96.6	    29	.........................G...	GGGTTCACTTGGGTGAAACTGAACTAACT   	
    228621	    29	  75.9	     0	...........ATTC...A......G..C	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  97.8	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGGCCGTCTGTGGCTGACGCAGCGCGTTTTGCGACAGCAGGGGGCCATTCGGATGCCACAATCTGCCCGATTATTGATTGAATCCGTCTACGGGGAAGATATCGCTATTCCCGATGGTTTAGCCAAAGCCGAGCAAGCGCAGTTGGCAAAATATTACTGCGATCGCGCGTTTGCTCACCAAATGCTCCTGAACTTCAAGCCGGGATATAGCCCCGATAGCAGTGATTTCCTGGCTGACAAGCTCTCTACTCGCCTGGCAGAAGAGTCGATCACGCTGTGGCTGGCGAAAAACGTCGATGGACAGTTGCTGCCTTACGCCTGCGGCGCGCATCAGTGGGAAATGAGCATGCTGCGGGTGCGGGAAAGCTGGTGGCGTAAACACAAAGCTGAATTCACGCTCCTGGCTGAAAAGCCGCTGCAGCAGTGGTGTGTACAACAGCATCAAAACCCGGATTTCGCCGTGGTGATTATTGTTACAGACTCGCCGGATTGCGGTTATT
# Right flank :  GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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