Array 1 999557-1003865 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024619.1 Gelria sp. Kuro-4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 999557 30 100.0 36 .............................. TCGTCCCGGGCGGGGGCGCTTTCGCTCCGGGCACGC 999623 30 100.0 37 .............................. CCCCTACGCACTACTACCCGGCCCTTGCGCTCCCCTA 999690 30 100.0 36 .............................. AGCTCAAAGAGACTTATGCCAAAGAGGCTGCAGCTT 999756 30 100.0 36 .............................. TCGGCCCGCCCAGCGGCCAGTTTCTGCGCATACAGC 999822 30 100.0 35 .............................. TCCATTCGCCCCCCAAATAGGGGATAGTGCCGTAG 999887 30 100.0 36 .............................. TGGCATGACATTTTCGCCCGATCCATCTATTTGCCC 999953 30 100.0 38 .............................. AACAAAAAGGTCAAGGAAATCAATGCGTTCTTTCGCTC 1000021 30 100.0 37 .............................. CCGCTACCTGCACCTCCAACTTCTCTAGCCGCGCCTG 1000088 30 100.0 37 .............................. TGAAAAAGGTTCGTAGCATCGTGTCCACCACCTGGCC 1000155 30 100.0 35 .............................. GCGAAAGCAGCGGTGTTGGTGACGGCCGTCACCCC 1000220 30 100.0 35 .............................. ATGTGCAGTACCATCGGAAAGGGCCATGCTGGAAG 1000285 30 100.0 38 .............................. CGGATAACGTCTAGGGCGTTTTCCCCCAGTGCATCCAC 1000353 30 100.0 38 .............................. TCTGCAATCATCATCGCGAAGTTGGCAACGTCCGCTGC 1000421 30 100.0 35 .............................. CGGATGCGGCCAGCATGACTGAGGCCACGAATCTG 1000486 30 100.0 37 .............................. TCCATCCCAGCCTCATATAAGGGGTAGATAAAGGAGT 1000553 30 100.0 36 .............................. CTTACAGGCAACAGGAACGTTTGGCGAGGGAGGCTA 1000619 30 100.0 35 .............................. CATACCTCCCAATTGTCGTAGCTCCCATAACAACC 1000684 30 100.0 37 .............................. ACGCATCAAGAAGCATTGTCATTTCTCCTTTCGCCTC 1000751 30 100.0 37 .............................. CCGGCCCGCGGGCCTGGTTCGGTTTCTGGAACCAGTA 1000818 30 100.0 36 .............................. TGGTGTCGATAATTTGCTTTAGCTGAGCATCGGTGA 1000884 30 96.7 37 ............................G. ATGCTCCTCGCCGCCGCGCCCTACGTACTCGGCGCGG 1000951 30 100.0 37 .............................. TAACTCCCATTTTCTTTGCCTCTTTAATGCTCCTCGC 1001018 30 100.0 36 .............................. CTTTTTCGTTGTGATGGCTGTGGTTTGGTACCCTAT 1001084 30 96.7 35 ..................G........... TAGGTCTGAAAGTCCTCCTCGATTGTAGTTTCCCT 1001149 30 100.0 36 .............................. CGGGAGCGCCCGCGCTTAGGCAAGTTGCCCCAGCGG 1001215 30 100.0 37 .............................. CCCGGCATCTGTTACGCTCTCAACGCCCATCGTGTTC 1001282 30 96.7 36 .............................T CCTGACACCACACACAAAACTTAGTGGCTTCTCATC 1001348 30 100.0 38 .............................. TCGATGAGGCTCTCCAGCCGCAGGACCAGCCCTGCGAC 1001416 30 96.7 36 .............................T CCATGGGGACGGATATATCATCGTCCAGGACTGGGA 1001482 30 96.7 36 .............................T TGGTAAGGACGAGTACGACTGGCACGAGCAAGCGAG 1001548 30 96.7 35 .............................T TGGGCATGGCCCCGAATGCTTCGCGCATACTGAGG 1001613 30 100.0 37 .............................. GCGGCGGGAACAGGCGCGGAGGGCGCGGCGGGCGCGG 1001680 30 100.0 37 .............................. CGGGGGGTGGAAATCGCCCGCCACGCCCCCACCCGCA 1001747 30 100.0 35 .............................. TCACCCCTCTCACCCCTGGCCATCGAAAGCCGACC 1001812 30 100.0 36 .............................. GTGTTTCTTTTGCTAGGAAGTCCGGCGAATCAGTTA 1001878 30 96.7 37 ...........G.................. GCGAAAGCTGGGAGCGGGTTGGGGACGCGGACCCGGA 1001945 30 100.0 35 .............................. ATTTTTCGACCATTTTCTTTTTTGCGCTGTAATTG 1002010 30 100.0 35 .............................. GCGCATATGTTCAGCCGGAAGCGCTGGGGGCGTGA 1002075 30 100.0 36 .............................. TTCGTAATGCGAATGTTCCTGATAACCGCAAAGGCA 1002141 30 100.0 35 .............................. GCAGCAACCGTGTTTACCATGATTATGATTTACAT 1002206 30 100.0 36 .............................. TACGGTGCAGAAAATGACAAGATTCGACGTCGTGTC 1002272 30 96.7 37 .................A............ CCACTCACACCAGTCCATGGCACAGTGTCAGCTCCAG 1002339 30 96.7 36 ......................C....... CAGGGGCTGAGGTTCTGGAGCGCTGGTCGGGAAAAG 1002405 30 96.7 35 ......................C....... GGTCTTCTGTAGCTGGTTTTGGTGGTCGTGTTGTG 1002470 30 96.7 37 ......................C....... TCCGCTGGCGCGCCTCTCGCGGTGTGGCCGCCTCTCC 1002537 30 96.7 35 ......................C....... GCGTTTCAGTCTCGAAAATCCTGACACCAGGAATG 1002602 30 96.7 36 ......................C....... CACACCAACTGGGGGCGTTCATCCTTGAATGTCAAC 1002668 30 93.3 35 ...................A..C....... TTGGCTCGCAGGTCTCCGACTACTACGGCGCGGAT 1002733 30 96.7 35 ......................C....... TGCGTTCGTCAAGGCGCAGATTCTGCGGGATGCAG 1002798 30 96.7 36 ......................C....... ACTTACAACCGCAATCCCAAGAGCAACCGACCGCGC 1002864 30 96.7 36 ......................C....... CAGCCAAAATAACAGCCTCACGCAGTTCGCTAGGTG 1002930 30 93.3 37 ......................C.....C. AGTAGAACTCGTCAGGGGTAATCCCCATGCGCTGGAA 1002997 30 100.0 38 .............................. CTGAGATGGGTAGCTACCGGTTTTTCAAACAATGGGTG 1003065 30 100.0 35 .............................. GTAGAAGAGGCCATCCCGGTCAATCCTGACCGTCC 1003130 30 100.0 36 .............................. CTATGGCATTTACCTCGGCCCCTCTCCAGCTGCTGT 1003196 30 100.0 37 .............................. CCCTGGCAAGCTCCAAGACCGAGCTTTTTGCCGTGGC 1003263 30 100.0 36 .............................. ATGTGTGGTCTCACTTGCTCCCATACCTCGTCCGGA 1003329 30 100.0 36 .............................. CTTCGCTGCTCTACAGTGTCTGCCGGCATGAAGCCC 1003395 30 100.0 36 .............................. CATCGCTGTACCTACCATAACCCACCTGCGGCCCAA 1003461 30 90.0 34 ..CT.C........................ ACGGCCTGGCCCTCACCTGGGATGCGTTGGAGGT G [1003478] 1003526 30 93.3 37 .G...C........................ CTGGGTTAAGCCCCTGGACCACCATGTCCAGGAGGGC T [1003530] 1003594 30 86.7 35 ..CT.C..................C..... GAAGTAATGATGGTGGGGAGCTGCTCGGCGTACCT C [1003618] 1003660 30 90.0 36 ..CT.C........................ CGGATAAACGAGCTTCCATAGCTACGGTAGCAATGT 1003726 30 100.0 37 .............................. CCTCACTGTATCTGCTATAACCCACCTGCGGCCCAAC 1003793 30 76.7 13 ..............C.A..TTCC...C... CGTAATACTTTTG Deletion [1003836] 1003836 30 93.3 0 ......G..............G........ | ========== ====== ====== ====== ============================== ====================================== ================== 66 30 97.9 36 GTTCTGAGCCTACCTACGAGGAATGGAAAC # Left flank : TCACAGCCATCTCGCCCGTGACCGTCTACTCAACTCTTTTTACTTCCGAAGGTAAGAAGAAAACGTATTACTACCACCCTTCAGAACCTGAGTTCGCCCAGCAGATAAAAGTAAACCTGGGGAGAAAGGCGGCCCTCCTCGGCCTCGGTCCCAAGATTACCGAAAGCATCGCCCTCAAGTCCGTCCGGGTACGAAGCAGTGATCAAAAGGTGCTTTACTTCAAAGATACCGTGGTCAAAGGCTGGCTGGGACAATATGTATTTGAAGGTGACCCCGCTATGCTGCAGGTGGCACTCGATTGCGGTATCGGCGCCAAGAACAGCCAGGGCTTTGGGATGCTGGAGCTGATTTAGCCCTTGTCGTCGATCCTCAGTAGTGTCAAGAACCGGGGGGATCGACACCAGCACAAACACCGGAGTTACGGCCTTTTCCCAAGCAGACTGACTCAAAAGAGCCGAGAAGGCGTAAGGAAAAGGCCAGTATTTTCAGCCCCGCGACGG # Right flank : CGCGGGTCCTGCCGGGCCGCAATTTCACCGGCCTCGTTCTCCAGACTCAAAAGTTTACCCCAAAAGTTTTTCACCCCGTCCGCAGATGACGGGGTGAGTTTGTTATATTGAAGAAAAAGAGAAAGGAGTCCAGCTAAATAACCTAAGCCCAAAGCGACTTTGGCTGAAAGATTGACCTAGTCAGAAAAGACTTCCTGATGAAGAAGGATTTACCTCAAATATGTCGAAGTACTAGTATAACGAAGTAAGTTCAAAGGAGGCAGACTTGTGCTGGCTCATTCCGGCAATAAATACCACAAGACCCACGACCTGAGACAGCACTTGACCGCTACGGCTGCCCTTGCTCGTTCCTTTGCTCTTTCCCTGGGTGCTCCGCAGTTGGCCTATGTAGCGGGGTTGCTTCATGACCTTGGCAAGTATCATCCGCAATTTCAAGAATATCTGCAAGGTTTACGGCGGCATGGCCCCAAGCACTCAGCGGTTGGCGCCATTTACGCGTC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAGCCTACCTACGAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 1011742-1015589 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024619.1 Gelria sp. Kuro-4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1011742 37 100.0 33 ..................................... ATTGAGTCGGACTTACTTCCCAAGCAGATTAAC 1011812 37 100.0 37 ..................................... CTCCATTAACCGGGTAACGGTTGCAATCTGCTCGGGA 1011886 37 100.0 34 ..................................... CCGGTCTACAGGGGACAGGGTTTTGAGCACGTCT 1011957 37 100.0 34 ..................................... ATCCAAGGCCTTGCAGCGGGTCTTGGTGATTATG 1012028 37 100.0 34 ..................................... CTGCCTATGGATGACCGTCAGTACGAGGTGGGCA 1012099 37 100.0 33 ..................................... ACCAACCTGACCACCACGTGGGGCGGCGTGTTT 1012169 37 100.0 36 ..................................... CTGGTAGTAAGTAATCCCATCAATAGGCCGTAGACT 1012242 37 100.0 34 ..................................... AATATCCCTAAAGGCTGCCGCCCGCTTGGTTCGT 1012313 37 100.0 35 ..................................... CTGGAGACGGCCCAGCTAACTATTCGGCAGATCGC 1012385 37 100.0 36 ..................................... GGCACCGGGTGTCGATCCAGCAGCCCGTCAAGACCC 1012458 37 100.0 34 ..................................... GCAGGCCGTTACGGGCAACACCGCCGTGGAGTGG 1012529 37 100.0 34 ..................................... CTCGGTGCCAAGGCCGCCGGCGTATTGGTTTGCC 1012600 37 100.0 36 ..................................... GGCACCGGGTGTCGATCCAGCAGCCCGTCAAGACCC 1012673 37 100.0 34 ..................................... CATGGAATGCTACCACGCCAGCGGGCACCAGCGT 1012744 37 100.0 35 ..................................... CCCCCATTGCTTAAAGAAGAAAGGCACCTGCGCCT 1012816 37 100.0 35 ..................................... ATAGGCGATTCTGTCCACACTTCGACTACCTTAAC 1012888 37 100.0 35 ..................................... CGCGTACAGCCGCACCAGTTTGCGCGCCGCCGCAC 1012960 37 100.0 35 ..................................... CGCTTATACTGGGCAGTGATGTCCGCCCAGTATAA 1013032 37 100.0 37 ..................................... ATCTTTTGCTTTCCAACTCTCCAATGCCGTTTTTATC 1013106 37 100.0 37 ..................................... TCAATAAAGTACTTGGCAGACGTATTCCGGATCGCCG 1013180 37 100.0 35 ..................................... CCCGTATCTCTATCAAGTCGTCACATGGCTTAAAG 1013252 37 100.0 35 ..................................... CTTACGGCGGTCATAACCTGCTCTACTGTGCTAGA 1013324 37 100.0 34 ..................................... TTCCAGCACAGCATCATAGCCGTAGTCGTTATAG 1013395 37 100.0 36 ..................................... TCCGACCTTTGGGGTAGATTTAACGCACGTCTGTTC 1013468 37 100.0 34 ..................................... GTCATTCGGCTGGTCGTGCAGGAGCCAGGCCACA 1013539 37 100.0 34 ..................................... AACGTCATGTTCACGAGCATGGGCTTCGGTGAAC 1013610 37 100.0 35 ..................................... CTAGCCTGTGAGCGGCACCTGCGCGACCTGGATAC 1013682 37 100.0 34 ..................................... GTCGAGCGCGTGAACATCGGCGAGAACCAGACCC 1013753 37 100.0 34 ..................................... AGCAGGGCCGCCATCCCCGCCACACACTGGACAG 1013824 37 100.0 34 ..................................... CACAAAGTCCTGTGCCATCACATAGGCTTCTAGT 1013895 37 100.0 36 ..................................... ACAGCTATCTTTTTCGCACCCTCTATCACGAACGTC 1013968 37 100.0 35 ..................................... ACCGAAGATATTGCTGGCTGGAATCCTGGCGATTA 1014040 37 100.0 35 ..................................... TCGCCCATAATAACCTCATGCAGCCGCTGGTACGC 1014112 37 94.6 34 .............A......................G GGATGGCATCTTTGCTTCCTGCCACCGCGTCGAA 1014183 37 94.6 35 .............A......................G ACATAGTACGTTGCCATTGCTTTCGTCCCCCTGCC 1014255 37 100.0 34 ..................................... AGCACCCTATCTCGTAAGGCCGGCGGCACTGTGC 1014326 37 100.0 38 ..................................... CTACGTCCTTGGTATCCTCTGGGCTTGGCGCTTCGCCC 1014401 37 97.3 36 .............A....................... TCCGGATATGGTTCCACTCAAGACTCAAGAAGTTGC 1014474 37 97.3 34 .............A....................... GCCATACTCTGCCCTACCTGACCAGCGATGTCCC 1014545 37 97.3 35 .............A....................... GGCGCCGCCGGTGGTTCCTGCCACGCCACGCCCAG 1014617 37 97.3 34 .............A....................... CTGCCGGATCACATGATAGTCCTGCCCTCTGACC 1014688 37 94.6 35 .............A.......A............... CGTGATGGTGGTAAGTGGTGGGCAGAGACTAAGGT 1014760 37 97.3 37 .............A....................... GTTGCTCCAGCTGGCACCCTTGATGGACACATGGCCA 1014834 37 97.3 34 .............A....................... GCCGTCGAGGGAGTGAGAACCGCCGACAAGCTCA 1014905 37 94.6 36 .............A...............G....... TCACCGAAGTAAGGGCAACAAAACGCGCACGTTTTC 1014978 37 97.3 35 .............................G....... CACTCCCCAACTTCTCTCGCTAGCGCTGCAAAGTC 1015050 37 97.3 37 .............................G....... AACTCAGCCACGGGCACCACGCTCCCCTCCTCGGGTC 1015124 37 94.6 35 .............A...............G....... CTGTTAGCGTACGGCCTGTTATTCGCGGGAAGGAG 1015196 37 97.3 34 .............A....................... TAGCAAACTGCACAACGGCTGCTGCAGCCTGCCA G [1015225] 1015268 37 94.6 33 ....G........A....................... CGGCCCGAGAACGCGAAATCTGAACCGATACCC 1015338 37 97.3 34 .............A....................... GTGAACGGCAAACTGGTAATCAAAGACAGGCCGC 1015409 37 94.6 35 .............A.......A............... GGAAGCACAACCGTAACCTTTACCTTCTCATCACC 1015481 37 91.9 35 ............T.............G.A........ GCCCTGCCGGCAACGACGATGAACTCATCGCCGCC 1015553 37 91.9 0 ............A........A.....A......... | ========== ====== ====== ====== ===================================== ====================================== ================== 54 37 98.5 35 GTCGCACCCGGCCTCCAAGCCGGGTGAGGATTGAAAC # Left flank : ATTTACCAGAGTACCCGCCATTTACTTACCGGTAGGTGGTAGTTATGGAGATCTTGGTGTCCTACGATGTCTCCACTGAGTCAGAAGGCGGCCGCAAACGACTGCGAAAGGTTGCCCAGGCTTGTAAGGACTACGGCCAGCGGGTCCAAAAGTCTGTCTTCGAGTGCTCAGTTAATGACGTCCAGTACGAGCGCCTAAAGCAGCGGCTTCTGGAGTATATCGATGAAAAAGAAGACAGCCTTCGCATCTACATGCTTCGTGAACCCCGCGCTAAATATGTAGAAACCTTTGGCGTAGACCTAAGGATAGACTTCAACGACCCGCTAGTTCTGTAGCGCGAACCGGGAGCCGTGACAAAAAGTAGGAGGATTCGCGATGCACGCCAGTCAAGGGCTTGTCCGCTCTTTTATTAAGATCTCCTTTAGAAGAAGAGCTGGAAAGAGCGGGTTCGCGCATTTGCACCGTGGAACCAAGAGCCCAAGCCTGCTGGCGCGAATGCT # Right flank : CAAGGTAAGGATTGCAACAGGCGGGTTGGCATGTCATAATTACAATAAAACGCATCTCTTTTCAGTAGTCTGGGAGCGATTCAGGGCTGCATTACGCTAGGAGAAGAATGAAACGCGAGCAGCAAAGGATAAGATTGACAAGGTCTTACCGACATTTTTTAGAGCACCTGCAAATCGGGAATTGATAAGCAGGTGAGGATTGAAACGTTATACTAGTTAACTATTGCAGCGGTTATTGCGGGTAGCGTGCCACTCCGCCTTTCTTTTTTGCTTGGAGAGTTTGCGGCTGGATACTAATCGAGTCTAACCATGATGGTTCAGTTGCTCGACCTCTGGGATGAACAGCTAAGAGTTGGAAGTGATGTCTACCGCCAGCAGTGCCGAGGTGGCAGCGTGTACGGGTCAAGGGGCGGGCTTGCCCGCTTGTGCCGACGGCGAGCACATCTGTCTCAGCACGGTGCCGATCTTTGCCGCTCTCAGCCGGGCCGAACTGCAGCAGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCGGCCTCCAAGCCGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.80,-14.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 3 1017429-1017722 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024619.1 Gelria sp. Kuro-4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1017429 31 100.0 34 ............................... AATCACATCATACCCAAACTTCCGAGACTGGGAA 1017494 31 100.0 36 ............................... CTCGACCTCGGCCTTCCTCGTAGCGGCCAGCTCGCT 1017561 31 96.8 34 ..............................C CGTAAACATGGTACGGTTCCCACGCCCTGGATTC 1017626 31 100.0 35 ............................... ATGCTCGCTGGTGGCTTCAGGTGTTGGCAGCAACC 1017692 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 99.4 35 GTTCTAAGCCTACCTACGAGGGATGGAAACA # Left flank : GGATACGGAACCTCCTCCTCTATTTTGCGGGGCGTTACGTGAACTGGGTTTTATCGGCAACATCAAGATTGACCTGGTGCGCGGTGCCAAAGGCAGTGTTCCCGTAAAGCGTGAAGCCAACACGCTCTGCCTCGTAACCGAGGAAGGGAAACGCTTCCTACCCGTGGAAGAATCAGTGAGATCCACGTCCGGAAAGCTTGACTTGAACAAACGGTTCCTGGAACTCTTCACGGAAAAAAGGGCCGGCTGGGACAATATGTATTAAAAGGTGACCCCGCTATGCTGCAGGTGGCACTCGATTGCGGTATCGGCGCTAGGAACAGCCAGGGCTTTGGATGCTGGAGCCGATTTAGCCCTTGTCGTCGATCCTCAGTAGTGTCAAGAACCGTGGAGATCGACACCAGCACAAACCACAGAGTCACGGCCTTTTCCCAAGCAGACTGACTCAAAAGAGCCAAGAAGGCGTAAGGAAAAGGCCAGCATTTTCAGCCCCGTGACGG # Right flank : ACCCAAAAGCCAACGCCGCACCATCCACCGCACGGAGGATTCTTTTCCCATTTCGGCACCATGGTTTTTCAGGGGACTCTAGTTAAGGAGGTGCACAATGCCACCCCGTCGGCGTGATGATATCAGTCGTGCCCTGCACAGCCCGGACAAATCTTGCAGGAAGGTTACTTGCTGGAGGAGACACAGGCTCAGTAGTAAAGCCTCTGGATAAAAGAAGTTTTCAGCTCGAGCCAACGATGCGTAAAGATTTATAAGCTAAGCGGGAGGAAGAGCGGCTTTCCATGAAGAATGGCAGTGCGCAGCGTTTAACCGAGGCGGCCATCCGCGAACTGGCAGATGAGCGTAGCTTTGAGCGCGGGTGGGATTATTACAAGGATGGGGCCGTCCAGGAGCCGGCACGCCGCAGAAACGAGCTTTACGGATTGTGTTACGGATCGAGAGATGAGCCTTACAGGGTGAAAGTTGTTCTGGAGGACAGCGGTATTCGTGAGGCCTACTGT # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAAGCCTACCTACGAGGGATGGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //