Array 1 205447-202308 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADODK010000002.1 Klebsiella pneumoniae strain Kpn21 NODE_2_length_723113_cov_36.751398, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 205446 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 205384 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 205322 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 205261 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 205200 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 205139 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 205078 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 205017 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 204956 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 204895 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 204834 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 204773 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 204712 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 204651 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 204590 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 204529 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 204468 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 204407 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 204346 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 204285 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 204224 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 204163 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 204102 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 204041 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 203980 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 203919 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 203858 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 203797 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 203736 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 203675 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 203614 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 203553 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 203492 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 203431 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 203370 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 203309 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 203248 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 203187 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 203126 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 203065 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 203004 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 202943 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 202882 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 202821 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 202760 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 202699 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 202638 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 202577 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 202516 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 202455 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 202394 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 202336 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 52 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //