Array 1 133-1838 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFO01000082.1 Flavobacterium psychrophilum isolate 65-SE563_S14_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 133 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 208 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 284 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 360 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 436 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 512 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 588 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 663 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 739 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAATT 815 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 891 46 100.0 28 .............................................. AAAAGAAATAGCAACAGCGACGAGTTTC 965 46 97.8 28 ............................C................. AGGCACTTTTTACTTAAATAAGTCTATT 1039 46 100.0 27 .............................................. TAATAAGATGCGGGTCGTTTATTCCGT 1112 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1188 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1263 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1339 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1414 46 100.0 29 .............................................. TCATAATCTGATGAAAATTGCTGTTCAGT 1489 46 100.0 30 .............................................. AAGGTAAATAAAATAAAAGACACATTTAGC 1565 46 100.0 30 .............................................. AATCAAAATAAGGTTTTAAAAGCGGCTTGG 1641 46 100.0 30 .............................................. AGGGCTTCGATTTTCTCGGGTTTCCATTTA 1717 46 100.0 30 .............................................. CGGTAACATCGATATAACTTGCGAGCTGGT 1793 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 23 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : AATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //