Array 1 2814769-2824597 **** Predicted by CRISPRDetect 2.4 *** >NC_010296.1 Microcystis aeruginosa NIES-843, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================================================================== ================== 2814769 37 100.0 40 ..................................... TTCAGAATTCGACACAATTATTGCTATAAAAAATGATAGC 2814846 37 100.0 35 ..................................... ATGGATTTTACATGGGATGAAGAAAAATCAAAATT 2814918 37 100.0 36 ..................................... CATGAAGGATACCAGATAGAACGTAACGATGGGACG 2814991 37 100.0 35 ..................................... CAATGGCAAGTGGAGAGGGGTGTTTATGATTTAAA 2815063 37 100.0 36 ..................................... GAGAGATTGCCTTGATCGGAATGTTACCTCATCAAT 2815136 37 100.0 35 ..................................... AACTTAATCCTCTAAAAAATCATGAGAGTCATAGA 2815208 37 100.0 36 ..................................... GGAGAATATCGGTATCTCTGAGGGTGCGTTGCGGGG 2815281 37 100.0 35 ..................................... GTGGTGAATGTGAGACTGCAAGTGGATAGGGAGCC 2815353 37 100.0 35 ..................................... TTGCCTTAGCCAACTTCCGTAATTCGTTAATTCCT 2815425 37 100.0 35 ..................................... CCCCCAATAGCCTTTCTTGGCTAATTTGAGGGCTT 2815497 37 100.0 34 ..................................... AGAAATGTGTCGAATTGGGCAGTTTATTGACCTA 2815568 37 100.0 37 ..................................... ACAACAATATCTTCAGAATTAGTCAAAGGATGATCCC 2815642 37 100.0 35 ..................................... TAATCACTTTTATTGCTGACTTTGCTGTACATCTT 2815714 37 100.0 36 ..................................... GATGCTTTATAGGGAGGAGAGAAAAATAAAAAAAGA 2815787 37 100.0 35 ..................................... TCCTATGGATGGGCATCGGAGGGTATTAGCTTGGT 2815859 37 100.0 34 ..................................... TCGATTAATCATCCTAAAGATATCGGCAGAACCG 2815930 37 100.0 33 ..................................... CTCTACTACTCCATCTACCCAATAAAAAACCCG 2816000 37 100.0 34 ..................................... AAGACTAGGAACATCAGCATAAGTTGAAAACAAA 2816071 37 100.0 35 ..................................... TTGGCACTTAAGAAAGGAACCCAAGATTTAAGCGT 2816143 37 100.0 34 ..................................... CCAAACACTAGCTTTTACAAAGCAACCAGCTCGT 2816214 37 100.0 35 ..................................... AAGCATGGAAAAACTAAGCGAGTTAACATCAGAAT 2816286 37 100.0 34 ..................................... AACCCTGATTCTAATGCAAGAGAATTGACTTCTA 2816357 37 100.0 34 ..................................... CGGCATTCTCTATCGGCGCGTCTCCGATAGACTC 2816428 37 100.0 35 ..................................... TCAGGATTCGGTCCTGTGTAGTGACATCTATAGTT 2816500 37 100.0 36 ..................................... AAATTTAGTTTTGACTGCAATTAATACTATCTCATC 2816573 37 100.0 35 ..................................... ACCTGAGAAAGCACGCTGGCGGGCGAGGAAATATA 2816645 37 100.0 34 ..................................... CTAAAATTACTAGAAGGGGGCGTGGTATGATTAG 2816716 37 100.0 35 ..................................... CGAAATTTTACTCGAAAAGCGTCGATTACTACCGG 2816788 37 100.0 34 ..................................... AATGGTTTGCATAATCCTAATTGCTACATCTCCC 2816859 37 100.0 39 ..................................... GATGCCATTGGTGAGCCGTCTTTATCTGATGATGAAAGG 2816935 37 100.0 35 ..................................... CTTATCCCTTAGCGAAAAAAAGCAGATTGCCTCTT 2817007 37 100.0 37 ..................................... CCAAAACAGCCATGGCATACTCGATGATGTCCAGGCT 2817081 37 100.0 37 ..................................... GTTTTTTAGCACCCAATCAAACCAACAACACGCAAAG 2817155 37 100.0 37 ..................................... ATTATACTCCCTAAAGCAGCTAAATTGTTTCCCGCCG 2817229 37 100.0 36 ..................................... GTGCTAAGACTAATACTGCATATTATTTTGGAGATG 2817302 37 100.0 32 ..................................... GGGATTGTTTTCTTTTGGGATCGAGTTCTCGA 2817371 37 100.0 34 ..................................... TGATAAATTGGCATCTCTTTTAAATCTTGCTACT 2817442 37 100.0 34 ..................................... CATCAGGCGATTTCAAAACTACGCGAATTGGAAG 2817513 37 100.0 36 ..................................... ATCCACTGCCCGACCCTGGGGACAATCCATACTAAG 2817586 37 100.0 35 ..................................... AATCTTTCGCGAAACAGCATCGCTAACTTAAATGG 2817658 37 100.0 34 ..................................... ACAAGCCTACAAATCGAACACCTACCCCTGCCCC 2817729 37 100.0 35 ..................................... TTGCTTGATAGAATCGTGGTACAAAAAAGCAACCA 2817801 37 100.0 35 ..................................... TTTTTTAATAATCAGATTAAGCCTAATTTAACCGA 2817873 37 100.0 33 ..................................... TTGGATAAGGCTGAGACCCGCATAGCCGATCGC 2817943 37 100.0 35 ..................................... ACGATAATTGCTGAATCCCAATCCTCACGAATTTT 2818015 37 100.0 35 ..................................... TAAATGTTATTAATTGGGCGTTAGAGAAAGCACAA 2818087 37 100.0 35 ..................................... CGATTTCCCCAAAAATACGATCTTCTTTGTTTAGG 2818159 37 100.0 34 ..................................... TTTGATTGGAATTGATACTCAATTTCTCTTTCTC 2818230 37 100.0 35 ..................................... CAATTTTCCCTAAAACAACATCTCGATCATGATTC 2818302 37 100.0 35 ..................................... GGGCTTAACGCGATCGGGTTCCTAACCGACTTTCA 2818374 37 100.0 35 ..................................... AAAGTTGCATTCTGAAAGTCTAAAATCTCATTGCC 2818446 37 100.0 36 ..................................... AAAGGAATTTTAACAGGGGGATACATTTGTTACTAG 2818519 37 100.0 36 ..................................... GTGATCAAGATTAATCGACCGGGGAATTAAATTAGC 2818592 37 100.0 34 ..................................... TCAGACTAACTCCGAAGGGAGTCTTGGGGAAAAA 2818663 37 100.0 34 ..................................... AAGTTCCAATGGTACGAAACAGCCTGGGCAGACC 2818734 37 100.0 36 ..................................... AACGATTTTAAGGATTCCGGGGATGCAGTCTCGCTC 2818807 37 100.0 34 ..................................... ATTCTAACTTAAACTCAAGAAAAATCAATAAACA 2818878 37 100.0 36 ..................................... CCCCTCATCTTGAATTGATAGCAGCGACGCATCATT 2818951 37 100.0 35 ..................................... TCCACAACGACGACGACCCCTTAACAGCATAAATC 2819023 37 100.0 35 ..................................... TCGATTACTTCTAAAACTTGAGACGCTCTGCTAGG 2819095 37 100.0 35 ..................................... AGGCAAGTCTTAGCCAAAGTTCTTAAACTACTATC 2819167 37 100.0 34 ..................................... TCGGAAAATAATCTTGATGTGACTCTTGATGCCC 2819238 37 100.0 35 ..................................... GTTAAAGATTTAATAGGCATTGTTTTTACTCCTAA 2819310 37 100.0 34 ..................................... CCATCGTAAATTCTGACTGCATAGCTATCTAATT 2819381 37 100.0 36 ..................................... TTGTAAAAATTATCTACATAAATCATCAAAGTTCCT 2819454 37 100.0 35 ..................................... CCAAAACTACAGCGACCCTACTGGTAACTTCCTGA 2819526 37 100.0 35 ..................................... TGCTGAATGAACTTATATATTGTGATGCCTCTAGA 2819598 37 100.0 35 ..................................... GTAATACCTTGAAAGAGCTAGAGTAGTAATCTATA 2819670 37 100.0 36 ..................................... TGTAAGTCACCCCATCATCATTGTTCCCACTACCAG 2819743 37 100.0 34 ..................................... TTCCGTGAATATTTATACTTACATTCACAGACTC 2819814 37 100.0 34 ..................................... GTTTTTAGGAATGATGCCTGCCGTGGCAATGTCT 2819885 37 100.0 36 ..................................... GTCTATAGGAGTATCTGGTAAATACCCTACTCCCTG 2819958 37 100.0 37 ..................................... TTCCCTATATCGCTTCTTTGAGCGGGGAGATTTAATT 2820032 37 100.0 33 ..................................... GTAATTCAGGCAAAAACTTCGGTTTTTGTTCAA 2820102 37 100.0 34 ..................................... TAAATATTCTTAGTTTTAATCCTCAGGCAAACCC 2820173 37 100.0 36 ..................................... AGTTAATAGTGGCTAGAGGAGTAGGATTAAATTGGC 2820246 37 100.0 34 ..................................... TTAAAAGCAGGTAGTTTTAACTACCTGCTTGATT 2820317 37 100.0 38 ..................................... TTGTGATCGACCTTTGCCTGCTTGCCAAGCTCTCGATC 2820392 37 100.0 34 ..................................... CTTCTACCCGCAATAATAGCGCTTCGATCTCTTG 2820463 37 100.0 36 ..................................... TTTGCTGTGGACTATAAGGGTCGCAACGCTCGATCC 2820536 37 100.0 33 ..................................... ATTGACAGATTACAGTGGGCTGAAACCCACCGG 2820606 37 100.0 35 ..................................... GCATTGGCAGATTTATTCAAATTAGCGATCGCATT 2820678 37 100.0 35 ..................................... ATTTTAGACATTTTTAGGTCTGTGCCAAGAATGCA 2820750 37 100.0 37 ..................................... CGTTAGTTTCAATTGAAGCATCAAGATAAATATCATC 2820824 37 100.0 37 ..................................... GTAATATTAAATTATAGAGAAAGACGACCGCAACTAA 2820898 37 100.0 34 ..................................... ATTTTTTTTAGCGACCCTTCGGCTTTGCTCGGGG 2820969 37 100.0 40 ..................................... TCATCCGTCTATCATTCACCTTTTTATAATACCATGAAAA 2821046 37 100.0 34 ..................................... ATGAGCCCATTAGTTGAGGGATTCACAAAAGTTT 2821117 37 100.0 35 ..................................... AAAAAAGGAGGACAAGTTGATGGGATTTGTAAAAC 2821189 37 100.0 32 ..................................... CGAATACTTCATCTGACCTCCTGTAGAATCGG 2821258 37 100.0 35 ..................................... CTCGCTCTAGCCTCGGAACGATCAGAAATCTACTG 2821330 37 100.0 36 ..................................... CTCTTTGGCTTTCTGATGTGTCTCCTCGCGACAAAC 2821403 37 100.0 35 ..................................... GCCATAAGAAGGGATCTCTTAAATATAAAATTATT 2821475 37 100.0 35 ..................................... AATTTCTTATTAGAGATTAAGGGGTAATTGCCCTC 2821547 37 100.0 37 ..................................... CCACAAACCTTTTTTACCGGAGTAACTTTTAGATCGA 2821621 37 100.0 35 ..................................... TCTTTATAAGCATATCTTCTCATTATCTCTCGCCA 2821693 37 100.0 35 ..................................... CTCAAACAAATCGGCTAAATCAAAACTCCAGTTTT 2821765 37 100.0 35 ..................................... TATTCCAATGCTCCCATTTGGGAGCCTAAAAAGAT 2821837 37 100.0 33 ..................................... CGAAATTCTGCAATTCCATCGGCAATAATTAAA 2821907 37 100.0 35 ..................................... CGAAATTCTGCAATTCCATCGGCAATAATTAAAAA 2821979 37 100.0 34 ..................................... ACAATCGAAATTAAAACTAATCCGATAGCGATTA 2822050 37 100.0 34 ..................................... TGGCAAAGGATAGGATAACTCTCTTAAACTCCGC 2822121 37 100.0 36 ..................................... GCTTCTGGTAGTGGAAATAATGACGACGGTGTGACT 2822194 37 100.0 39 ..................................... CTATGAAGTATCAGAAGATATTGCACGCAAAACAGTAAG 2822270 37 100.0 35 ..................................... CAACTCCTGCTCAACCTACTAAAATAGAGAAAATA 2822342 37 100.0 35 ..................................... ATTTGACGGCACATCTTTTGCTGATCAGCTAGAAG 2822414 37 100.0 35 ..................................... ACTAAGTATTTTGCTGGTAAGCAAATAGATGAATT 2822486 37 100.0 35 ..................................... CCTGATAGTGCAGTATCGCACCCCTCGCCTTAATT 2822558 37 100.0 37 ..................................... ATAGGCGATACGGGTATTCCATCCGGTTTCACCTGAG 2822632 37 100.0 34 ..................................... GAGGTACAGGTTGCGGTTTACTTAAGTCTCTAAC 2822703 37 100.0 35 ..................................... TTGGATACTTACGAAGATAAATTACCTTGTTCAGC 2822775 37 100.0 35 ..................................... TTGTAATTGAGCTTCGTTGTACAGCCAATTTAATC 2822847 36 86.5 147 .........................-....C.T.GG. ATTTTCGGGCAGCAAAAAAGGCTCAAACCATTACGGGACAAAGGGTTAACCTCGATTTATGATTTTCCTTGATCTATCTGGGTTTCAGCGATTTTGGGCTTCTCGAAGTAAATCCCAAGCAGGGATTGGGGTTGAGGCTTTTCTCGA 2823030 37 73.0 34 T..GTTT..TG...A.GT................... TCCTGCTTTGGTAAAATTACTGATGCCCATAAGC AC [2823051] 2823103 37 100.0 36 ..................................... CAGCCCGAATGGTACGAGACAGCCTGGGCAGACCAA 2823176 37 100.0 36 ..................................... TGCTAATCATTCTTTTAAATCTAATTCAGTAAACTT 2823249 37 100.0 37 ..................................... GTGATTGAGGTGTAGGTAGTTCCCGCCCATCCAACTG 2823323 37 100.0 35 ..................................... ATTCTGATGGCCAGTTTACGGTTGAGGTAATGGGG 2823395 37 100.0 35 ..................................... ATGTAAAACGGGAATCCGCAAAGAGTGTTACCCGG 2823467 37 100.0 36 ..................................... AAGGATCGTCGGGCGCGGGATTCGGGAAATGAAATT 2823540 37 100.0 35 ..................................... ATGGTTTTTACTCCTAAGTATTTGTTTTTACTGGC 2823612 37 100.0 35 ..................................... AAACTGTAACCCATATCGTTCCGTGATTCTACGGT 2823684 37 100.0 36 ..................................... CCCAGATCGGATATTTAGTAAATTCGATTACCTCTT 2823757 37 100.0 35 ..................................... ACCAAGTATTTTGCTGGTAAAGAAACAGACGAATT 2823829 37 100.0 35 ..................................... GCAGAATCGGAAAAGACGATTAACAATTTTTCCGA 2823901 37 100.0 35 ..................................... TTTTTAATCGATTCTTTTTCATTAGCAAGTAATTC 2823973 37 100.0 37 ..................................... ATTTGCTTCTTATTGCCATAGTGACAAAACCGTATGG 2824047 37 100.0 36 ..................................... GTAAGCACCTCTCGATACTTGCCACTGGACATATTT 2824120 37 100.0 35 ..................................... CAGTTGGACTGACTTATCGGCATCAGATTTTTAGC 2824192 37 100.0 37 ..................................... TTTGAAACTGGCAATAGCGTCGGTGTAGGAGCGGCGG 2824266 37 100.0 36 ..................................... CCCTTCGAGGTAACGCCTTTTAAAGCCAATCCCAAC 2824339 37 100.0 40 ..................................... AGTTAATCGATGAATAGCGATCACCCTCTTGACTGATCGA 2824416 37 100.0 35 ..................................... CGCCTACTAAATTCCCCTCATCTTGAATTGATAGC 2824488 37 100.0 34 ..................................... TTCTTTTGATGATGATGCTAACCGGGAAGCAATC 2824559 37 94.6 0 ................................C...A | C,C [2824589,2824592] ========== ====== ====== ====== ===================================== =================================================================================================================================================== ================== 135 37 99.7 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGACATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGCATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCCGGGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGAAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCGGGTGCGGCGCATACGAACCTTGAAAATCCCATAACGTATAGCTTTTACCACTGGGCG # Right flank : AAATAAACTATTCATGCTCAAGAATAATAATCATTCTCGGAGTGTAGGAGGTAGGGGTCGATGGTTGCCTCCTCCTTCCAATTTTGTAGTAGAATTAATCCTGTACATTATTAATCAAGTTTTTCTTTGTAAGTGTATATGGAATTAACTGATTCCCTCAAGAAATTGCTCAGTGAAACTGCACTTCAATTAAAAGGTGCAGCTAAAAGAAGATTCATGGCCCAAACAGTCTTAGAATTAGGCTATGGGGGACAAACCCTTGCTGCACAGGAGTTAGGCTGGAATCGAACTACTATTCGTAAAGGAATTAAAGAACTAAAAAGAGGTATTATTTGTGTTGATAATCATTCAGCTAAGGGGCGGAAAAAAGCAGAAGAACATTTACCTTTTCTATTGGAAAACATCAAAAGTTTAGTGGATTCTCAAAGCCAAACTGACCCAAGTTTTAAAAGCCAAAGGCTTTATGTGAGACTGAGTGCGGCCGAAGTCCGAAAGCAATT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 2826228-2829166 **** Predicted by CRISPRDetect 2.4 *** >NC_010296.1 Microcystis aeruginosa NIES-843, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2826228 37 100.0 37 ..................................... CTTAAGACAGTGCCTTTGAGCGATAAGGGCGATTATC 2826302 37 100.0 37 ..................................... GCAAATGCAAAATCTTCGGATCAAGCAGAATTATCTG 2826376 37 100.0 37 ..................................... GCAAATGCAAAATCTTCGGATCAAGCAGAATTATCTG 2826450 37 100.0 35 ..................................... AGGCGGGCCGGGAGACAGCCTTTTTCTTTGATCAG 2826522 37 100.0 35 ..................................... TTTGTGAGTCCCTGTGCAACAATCCGAAAATTCCC 2826594 37 100.0 35 ..................................... ACTACACACAACCGAATTGTAAGTGATAATTTATC 2826666 37 100.0 34 ..................................... CTGACAGAACGGGTTGAATGGGAAGGTAAGCCTA 2826737 37 100.0 34 ..................................... GCACAAAGTTGTCACTTTGTCTCGTCAGGAAAGC 2826808 37 100.0 35 ..................................... AAATTTTGCATTTGCTGAAAAAATCTTTGACCTTC 2826880 37 100.0 35 ..................................... GCTGGTGTACCTAGCCTACAATCTTAGTTTAAATC 2826952 37 100.0 35 ..................................... CATTTACTTTTTAATGAAGGCACGCCATAATTTAA 2827024 37 100.0 35 ..................................... TGTGCAAAGCTACGCCCATCGATTTCCCGTCTGGG 2827096 37 100.0 36 ..................................... TGGGAGATTGGAATCACAGCCGAAAAATAGGATCGA 2827169 37 100.0 35 ..................................... CCGGCTTTTTTAGCTCCCTCAGTAATGATTATTGG 2827241 37 100.0 35 ..................................... CCCAACTATACCGATGATTTCGGTACTGAATACAA 2827313 37 100.0 37 ..................................... CCCGTATTTGCGGGTGTTGGAGCTATACTCAAAAAGA 2827387 37 100.0 34 ..................................... ACTATGGTATAATGAAAGTACAAACAAAGAAAAG 2827458 37 100.0 37 ..................................... TTGATTATTTCCGTGGCTATTTTTAAGCATTGCTCAT 2827532 37 100.0 34 ..................................... CATAAAAGTGCCTCTTTAATTCCGGCTTCTAGAG 2827603 37 100.0 34 ..................................... ATTTTACTTGCAACTTATTCTCAATAAAAAATCA 2827674 37 100.0 36 ..................................... CAGAGGCTTGAGCTAATTCAAATTTTTCACGCGCTA 2827747 37 100.0 36 ..................................... TTTCCTTCCCTCTCGGCTTTTGCCCGGATAATCGGA 2827820 37 100.0 35 ..................................... TAAGTTCTGTAGAAAACGACTTAGATATACAGCTT 2827892 37 100.0 35 ..................................... ACTGTATTCCTTTGGTGCGAGAGTATCGGGGTATC 2827964 37 100.0 35 ..................................... TTTCCTTTATTTTTGGCTGTTTCTCCTAAGCTTGA 2828036 37 100.0 35 ..................................... TTCGGAGTATCCTGTAGATATGTACTTTTATAAGG 2828108 37 100.0 36 ..................................... TTTTTTGTATTCCGTGGAAGAATACGAAGAAATGAA 2828181 37 100.0 35 ..................................... ATCGACATAAAACACATACTAACAGTCCTAACCAG 2828253 37 100.0 35 ..................................... AAAGCTAGGCTAATAGCGGCACTGATTAAAATTTC 2828325 37 100.0 36 ..................................... GTAACTGCCTTATTTTCTGGCAGTTTTTTCAAAAAT 2828398 37 100.0 36 ..................................... TACTCGTCGGGAACCCTATCACCCGCTTTCGGTTCC 2828471 37 100.0 37 ..................................... CTGCCATTGTCCGCAATGGTAGCCCTAAGCTATCTGA 2828545 37 100.0 36 ..................................... GCCAATAAATCCAATTCTCGCCGGCGCGTCTTGACA 2828618 37 100.0 36 ..................................... AACAGAAATATTGCTGATTTCGCCGCTATGCCACGC 2828691 37 100.0 35 ..................................... CCCTCGGAACAGCAGTTGCGGCGGTGGCTGAATAA 2828763 37 100.0 34 ..................................... AATTACCACCGGCTTAATCCACCCAGACTGCCGA 2828834 37 100.0 38 ..................................... GAGGGAAAATCTGCCCTTGTCGCAGATGCCCAAATATC 2828909 37 100.0 35 ..................................... CATGATTTTCTAAATATTCAGCTATCTCTAGCCGA 2828981 37 100.0 35 ..................................... CATTTACTTTTTAATGAAGCCACGCCATAATTTAA 2829053 37 100.0 40 ..................................... CTCACTTTAGGCTAGTGTTTGCCCTCTCGTGAAAAAGCAA 2829130 37 94.6 0 ...................................GT | ========== ====== ====== ====== ===================================== ======================================== ================== 41 37 99.9 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : GTATTTTAGATGAAATCGAAACGGCTTTGAAATTCGCCCAAACTATGACTTGGAAAGGAAAACACCCGATTGTTAAGTTGATTACTGAAACTTATGAAAAAGGAGTAAAGCTTACTAAAAAAGCCATGGAAAAAATCGAAGAAAAAATCGAACGTCTCACAGAATCAACGAATCAAGACTTTCCCGATTTGGGACAATGGTTTATTGATATCTATTATGATAAGACCTAGTTTGTAGTTAACTAAGATGGTTAGCTAAAAACTGTCTTTGATTCTTTAACTTGTCCTTGTTATACTCGAAAAAGCTCGGAAGTATAAGAGTTTGTGCTGCCTATTTTTTCGGAAAAATAGGTTGTAATGGGAGACTCTTTGTTTTCCTAGACAAAAATAATTACTTTTTCAAAAAAACACTTTTCTATTTTTTTGTTGGGTATTTTATTCTCTGGAAGTCCCTTAGGGATTGAAACAGCAATATTTTTGGCATCGGATTCGGTCAAAACT # Right flank : TGAAGGGAATTTCTGAAATGGAATTCAGTCTGTCTATATTTGACTATACTTTTACTAACTAGGGCTTGCTGAATAATGGTAAAACCCTTTGAAAATAAGGCTTTTGACCTGTTAAAATCCGATGTTCATGCTGCGAAAATCGGATTGGGACCCTCAAAAACCTTGCATTATCCTTCTTGTAGTATATAAGTTGGTACGAAAAGAGAGGGCAACAAAGCCTGAAACGACCGACTACTGACGACCGACGACCGGCTACTGACTCCTAACCCCACCAACAAACTTTTTGCCGCAAACCCTATCTAAAAATCAAACTCGTCTAACCCCGGTTGTGGGGGAGGAAAGCGACTGCGAGGAGATTTTTTCGACTTTCTCAAAAAAGCGGGGATAAATGCGGCCATAAAAAATCCAATTCCCAAAGAAAAAGCCAATAAAACACCGATAGGTACTTTAATTGACTCAAATTGTAGAAACTTTAAAGAAACTGGTTGGATATTTTGAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 3 5822249-5821979 **** Predicted by CRISPRDetect 2.4 *** >NC_010296.1 Microcystis aeruginosa NIES-843, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 5822248 36 97.2 42 C................................... TCTCGGTGGACAAGCTTCGATTAAGAAGTATCAGTTAACTCA 5822170 36 100.0 38 .................................... GAATTTGACTGGTCTGAGCGCACCGCTCAAAACTTTAT 5822096 36 100.0 42 .................................... AATAAGAGTAAGGCTAATTAATAAATTAGCCTTATTTTTTTA 5822018 36 83.3 0 .................A....AT....T.C.T... | TT,T,G [5821986,5821996,5821999] ========== ====== ====== ====== ==================================== ========================================== ================== 4 36 95.1 41 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CTATCTCTACGATGCTGCCCTCGACGGTGGTGAAGTGGGGATGACTGGCTCTGGTGCTACCCATGCTTGGTTACAGGTTTATCTACCGGGGGCCGGTTGGCGTAATTATGATCCGACTAATCAAATTACCGCCGGCTTTGATTTAATTCGAGTGGCGATCGCTCGTCATCCCGGTCAAATCATACCTCTTTCTGGTTCTTGGTTTGGTGATGCCGATGACTATTTATCTATGGATGTTAAAGTGACCATTCGCAAGCTGGGGACGCTGCCAGATTTTGATCCGAGGGAATAGGTTGAATTTCGGGTTTTTCCTTGACCGGCGATCGGTTTCTGACTCCCCCAAAGGAAAACTTACTACTTCACTATTAGGATAACTGCTAAGGTGTTCGTAATTTAAAGCGAATATTCCCGTTAGGTTTTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAAAAGAAACCCTTTTTCTG # Right flank : TACTTAACTATAAACGGGATTATTTCGGCCAAAGTTTTTGAAATTTTCCCTCTTGACCATTATTAGAACTCTTGCAAATTAATTATATGTTATAATGATGGGTTAACTAATTTTCCCCAAAAAATTAGTTAACCAGTACATTCGTCCTGAATGAAAACTTGAAGTTTAACTTTTAACTCAAAACTCTTTAGATATGCTTTAATTTGGTTATCAAAACCTCTTTATTTAAGCGGCACAAACTATCTCAATTATAAAAATTGAGAATAAATTCTCCTTGACTTGATTAATCTTTAGGCAACTTTTAAGAAGCTGCTATACCTATCCCTAACTCACCGTTATAAATAGCCGCCAACAAGTTAACTCTTAAACTATATCTTCGACGACGATTCCGATATTTACAGGATAAGATTTTAAAGATTTTGAGTTTCCTATTTATATGTTCAATGATAATCCTTTCTTTGGCTAAAGCCTTGTTATACTCTTTTTCTAACTCTGTTAAT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //