Array 1 6277-4199 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGX010000075.1 Fusobacterium sp. DD17 JD3_74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6276 36 100.0 30 .................................... AATTTCAGCAATCGTAAACAGGAGAATATG 6210 36 100.0 30 .................................... GTGCAGCTGATATTCTTGCAGCACTATCCA 6144 36 100.0 30 .................................... TCTTCCCATGCCTAGGTGGCATATTTATAA 6078 36 100.0 29 .................................... ATTTTTAAATATTGTATTGTCTTTTATAA 6013 36 100.0 30 .................................... ATGGGACTAGAAGGGCTATTTGATAAGGTT 5947 36 100.0 30 .................................... CTTAGGAATAGCGGAGACAGAAGAAGAGAT 5881 36 100.0 30 .................................... TTACAAGAAAAGAAATTGATAGTTAAGGTT 5815 36 100.0 30 .................................... TGCAAGAGATAAGACCTAATCATTATAAGT 5749 36 100.0 30 .................................... TGGTATCAAAGGGTTGTTGTAAACGGAGAG 5683 36 100.0 30 .................................... GATGTTACAACTAGAAACCCTATGAAAGGC 5617 36 100.0 29 .................................... TATAGATGATATTCCAAAAGTAAATAAAG 5552 36 100.0 29 .................................... TAAAAAAAGAAAGTCTTTCGTCTGCCGTT 5487 36 100.0 30 .................................... ATTTGCATCCAAATATGAAAAGAGTTCGTT 5421 36 100.0 30 .................................... TGGTAAATATAAAGGAAGAAAACCTATTAC 5355 36 100.0 30 .................................... ATTGAACAATATTTTGAGATTAAATTCAAT 5289 36 100.0 30 .................................... TGACACTGGGATAGAATTCCCACAGATGTA 5223 36 100.0 30 .................................... TTTTGCCCAAATAAACTACTATTATCACCA 5157 36 100.0 30 .................................... AAGAAGCTCTCTAAAAACCACATATCAAAT 5091 36 100.0 30 .................................... GCAAAAGTTGTTTTTCCTGTCGAAGTACCT 5025 36 100.0 30 .................................... AAAGGTGATAAAGTTTCCATAGCTTCAGCA 4959 36 100.0 29 .................................... TAAATTAACTTCTTTAAACTGTTCTTCCC 4894 36 100.0 30 .................................... AAACTAGTTAGATTATCAATAGAAAGTTAT 4828 36 100.0 30 .................................... AACATTCCTTGGCTCTAAGTTTGTTGGTAG 4762 36 100.0 30 .................................... GGCTTCTTGAATTATGGCAACAATCAGCTA 4696 36 100.0 30 .................................... GTTGTAATCTTAATTGACTTATTACCAACT 4630 36 100.0 30 .................................... CGTTCCTAGGTATTATGGAATATGAGAGAA 4564 36 100.0 30 .................................... AACTCAACTGATATTCATCCACATGTTTAT 4498 36 100.0 30 .................................... GTAATGCATCTGGATTACGAGGGCTAATAG 4432 36 100.0 30 .................................... TTGCTTCAGGGCTCACTATTACATCCTCTA 4366 36 100.0 30 .................................... GAAGATGGAACAAATGAACTTGTCGGAGTT 4300 36 100.0 30 .................................... TAATAATTTTATGCAACTATATAACCACCT 4234 36 94.4 0 ...............G..................C. | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.8 30 GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Left flank : TTGTATTTCCAGAAAATAAAATTGCTTTAAAGGATATGCCAAAATTGCGAAATTTTTTGTTTGAATTGTCTAAAGAGAATAAAGTAATAGTGGCAACTTTTTCTAAATATCTTTTTGATTTTTCAACTTTGGATAATATTAATATTTATATTAATTCAAAATTAGCAAATTCTTTTACAGAAGATGAGATAATAAACGAAATTTATGAAAATTATCCGGTATTGAAGTCAAAAAATGAAATAAATGCTCTTCTATCTTTTGTATTAAAAAATTATTTATCTGATGTTTTACTTGGAAACATAATTACTAATAAATTTTTCTGTGAATTAGATAATGTTTTTATTGAAAATTATGAATTTATCTTCTTGCTCCTTTATTATTTAAAAAAGATAAGATTGAGTTATAAACTTAACTTGAACTATGATCCGACCTCTCCATTTTCGAACTATATAGAAGAAAAACTTTTAACATAATGTGATATATGTTAGAATAGATTTGAG # Right flank : CAAGGAAAAAAGGTTCAGAACTAAGCGTCTGAACCTTTTGTTATTTTTCAACTATTAAAGAATAATCTTCTGGAGTATCTATATCTAAGAACTCCTGAGAATATGGAAAATCAACAAGAGAAACAAGTGGAGTATTTCTAATTATATTTTTTCCACCATGGTCACCTTGAAGAGCAAGAAGCTCTTCTTTTTTACTATATGGAAAGAATACAGGTGAATATCTATCTCCATTACTTGTTGGAACAGTTATATATCCATATTTTTCAAAGTTATAATAGAGTTTTGAAATAGTATCTGGTGTCAAAAAGACCTGGTCACCAGTAAAAAATACAAAACCTTTTCCTGAAGAGTTTTGAACTCCTAATTTAATACTTTCACTCTGTCCTAAATTTGCTTTGGTGTTGTGAAGATACTTACAATTATATTTTTTACAAATATTTTCAGTCCAGCTGTCCCTTCCACATACCAGTATTTCAAAAAAGTTGGCGAAATTAAGTTTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAATATTTGAGTATGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 20781-22514 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGX010000014.1 Fusobacterium sp. DD17 JD3_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 20781 30 100.0 36 .............................. ACTGGTTCTCCATTTACAAAAGCAGGACCTTTAAAC 20847 30 100.0 35 .............................. TCACAAGGAACTTTACACCAAAATTCAAGGTTTTT 20912 30 100.0 35 .............................. TATGAACTTGAATTAGTTAAAAATGTTTCAGCTGG 20977 30 100.0 36 .............................. TGCCAGAATTTAGGCTTATTGAGCACGAAAAAACGG 21043 30 100.0 36 .............................. TCTTTTCCAAACTTTTCTTCTGTTATTTTTTCAAGC 21109 30 100.0 35 .............................. TGGCAGTTAATATCTTTTAAATCCTTATTATAAAA 21174 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21240 30 100.0 37 .............................. AAGGATTGATTATGACTTAGATGATGATTTGCTTGAG 21307 30 100.0 36 .............................. TCATCCGAATTAGTCATCTCATCTGTCCACCCCATC 21373 30 100.0 35 .............................. CAAAAATACAGAAGTCTTTACAATACTGATGGAAT 21438 30 100.0 35 .............................. GGGCCGTTGTTTATTATTTTATCCCCATCAATCCA 21503 30 100.0 36 .............................. TCACTTCCAAGCCAAACTGCACCAAATGAACCTCTT 21569 30 100.0 36 .............................. TTTTTTAATTCATCCTTTTTATAATTTTGGAATTTT 21635 30 100.0 36 .............................. AATCTACAAAACATATAGATTTATTGAAAGTTATTG 21701 30 100.0 36 .............................. AATTAAAGTTTATAAATAATTTCAAAACTAAACAGA 21767 30 100.0 37 .............................. AGTTATACTTCCAACGTGTTGAAGAGAGCAAAAAAAA 21834 30 100.0 36 .............................. TATTCTATTGATTTAGGGGAAAGAAAAAACCCCTCT 21900 30 100.0 35 .............................. GTGAAACGGATCACTCCTGGGGGTATTCAAAAAAA 21965 30 96.7 34 .A............................ TAAGTGAAAACGCCCCCCTTTACAAAGTGTTTAC 22029 30 100.0 35 .............................. AACTCCATAGGTATTATAACATACCTCAAAAACCT 22094 30 100.0 37 .............................. GCTATTACTCCTCTTTCTCTAATATTCCCTATATCAA 22161 30 100.0 35 .............................. TATTGTTATAATAGCTTTTGTAAGTTGTGTTTAAA 22226 30 100.0 35 .............................. CTTAAAGCAGATTTTAAACCAACAGAAAAAGAAGT 22291 30 100.0 34 .............................. TAAACATACTTGATACAACTGCATTCATTAGTTC 22355 30 100.0 35 .............................. TTTAGAGTTTTCAGAGTCTCCAATGTTTCACTTCT 22420 30 100.0 35 .............................. GTAGTAACACGAGGGCTCTTTAGTTTATCAACAAA 22485 30 93.3 0 ..............CA.............. | ========== ====== ====== ====== ============================== ===================================== ================== 27 30 99.6 36 ATTGAATAATTACATTGGTAGTATTTAAAT # Left flank : AGAATTCTATCCTTTTAACATCAAGGAGAAGATTTAATGAGTAGGAATAGATATAATTTTAACTATATTTTTCTTTTTTATGATGTAAATGAAAAAAGAGTAAATAAGATTTTTAAAGTATGTAAAAAATATTTAACACATTATCAGAGATCTGTTTTTAGAGGAGAAATAACACCAGGTAATCTTCTAAAATTAAAAAATGAGGTAAGGAAAGTTATTAATGAAAAAGAGGACTCTGTATGTATAGTCAAATTTATAAATGATAGGTATTTTGCAGAAGATACACTAGGAGTGCTATGGAAAGAAGATGAAGATTGTTTTATATGAGTTTTCCAAGTGGAAAAATAAAAAAAACTTTGAAATCCTCATAAAATAATTGTTTGCAACGAAAAATATAGAATGTTGAAAATTTGATGTGAGGTTGGAAAAAAATTGAGGCATTCCTTAAAATATGGTATATTGAAAGAAAGTTGTGATTTCAGAGTAAGCTGATTATGACC # Right flank : TATACTTCACCTAAAAACTTACACAACTAAGAAGGACGGTGGAGTTTTTTAGTTTTAAGAACAGAGATTATTTTTATTCTAAAAGAGGCCTATATGTGGTATAATTAAAACATTGAAATAGAAGTAGGAAGTGAAATGATGGGAAAAATTATTTATTTTATAGGTGGAGCTAGAAGTGGAAAAAGCTCTAAAGCTGAAGGGTATATTTTTGCAAGAAATTATACTAAAAAAATATATGTTGCAACAGGTATAGCTTTTGATGAAGAGATGAAAGCTAGAGTAAAAAAACACCAAGAACAACGAGGCAATAACTGGTTGACAATTGAAGGATATAAAGACCTTGTAGAAAAAATAAAACCTCATGTTGAAGCAGGTGGGGTAATTCTTTTAGATTGTTTAACAAATATGGTAACAAATTTGATGATAATGGATAAAGAGTATGACTGGGATAAAATTTCAGTTGAAGAGGTTGAACAGTTGGAAAAGGAAATTACTGATAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAATTACATTGGTAGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 27595-27887 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGX010000019.1 Fusobacterium sp. DD17 JD3_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 27595 29 100.0 38 ............................. TTACTGAAGAAGTTACTGAAGAGACAGAAGCTCAGGCA 27662 29 96.6 37 .............C............... TCTTGTTAACAAGTAAAGATTACAAGTTGCCATATTA 27728 29 96.6 37 ........T.................... CTACAAAATGGTACTGATAGAGCTTTTGGATGCGTTG 27794 29 100.0 37 ............................. GAAAATGACATTCAAGAAAAAAGTGTTCATGAAAGCG 27860 28 93.1 0 .............C.........-..... | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 97.3 38 TCTTAAAACATCCAATGTTACTATTCAAT # Left flank : TTTATATTCAGAATGCTCTTGTAGAAATATACCTTTAACTAAACTATAAAACAATTTATCATATGTTTTAAACTCTATACTTTCTGAGAATTTTTTATCACAGTACTCTCTATTTTTATCTTTTAGTTCATTTATAATGGAGTTATTATAGCTTAAAAAAAGCACCTTCTTATGTTTATTAAAAAGAGAGCCTGCTTGATCCTCTAAAATCATTTCAGCTCTGGCAAGTCCAACTAGTGTTTTCCCACTTCCTGCTGTCCCTTTTACTATTAAAATCCTTTCACTAGAGCCCACTATTGCAGCCTGTTCTTTTGATAGCTGTATCTTCATTTGACACCTCTTTATAAATGTGACCTGTTTTTCAATTTTATTATCCTCTATCAAGACCATATAATCAATACTTTTTTACTAAAAATTAAGTATTTAATTTTTAATTTCTCATTTTTAGCCATCTAGATATTTAAAATTTTTTCAAAAAATAAAAAAGACCCCTGAAAAGG # Right flank : TGGTCAAATAACGACTTGTTATTATTTTATTTTACGTAACTCCCTTTACATCTAAAGTATAACATATTTTTTCCAAGCAATAACAGATTTTGCCTTTATTTCCATAAGTATCAATTTTAGATTAATTCACAAATTATCTATCAGTTCACTTGGAAAATTTACTAATTAAATGTACTACACCCTCCATCTTACTTATCCAAGACTTTAGGTGCAGTACACAAAATTATTTTAATTTACTATTCTTCTACTGGCTCTTTACACTCCTTAAATTTATCTATCACAAAGATATCCATACCATTAGAAACCTGATACTTTCCTTCCAGTTCATATCTTCCACTCTTAATAAGTCTTTTGCAGGCTCCAAAATCTTCATTATCAAGAAGATAAAGATATAAATCTTTTCCACGTACCTTTGCCTGGCAGCCTTTAGTGACAACATAAGCCACTCTGGTAATAACTCCATTATTCTCTTCTCTCTCTTTAACTTTTAGCATCTTATC # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTAAAACATCCAATGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //