Array 1 104475-106943 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWMO01000005.1 Novosphingobium sp. PC22D contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 104475 29 100.0 32 ............................. TGCGCCCTGACACAGACCAGTGTAGACCGCAT 104536 29 100.0 32 ............................. TCACCCGTGACCGTATCGGTGAAGCGCGCATA 104597 29 100.0 32 ............................. GACACACGCCCATGAAGGTCATGTCGGTATGC 104658 29 100.0 32 ............................. TGGGCCCAGGGCGAGATGATGCTCGGCCATCG 104719 29 100.0 32 ............................. CCGCCGAACAGTGCGAACACGCCTCCCTCGGC 104780 29 100.0 32 ............................. TGGCGCGGTGCCTGCGATGCCTTCCTCGCCTG 104841 29 100.0 32 ............................. GCTACCTGCGCAAATGGCGCGCGGCTGTCGTT 104902 29 100.0 32 ............................. CAGTCGAAGCGGCCGGGAGAGCTCTACTTCGA 104963 29 100.0 32 ............................. TGAGCATCAGGCGGCGATACGATCTCGATTTC 105024 29 100.0 32 ............................. GCGACAGCAATGACCGCAGCTTCCTCATCGGT 105085 29 100.0 32 ............................. AAGCCCAGACCCAGCATGCCCCGCATCAGAGC 105146 29 100.0 32 ............................. CTGAAGGCTGACGAGCCGCTTACGATCGGCGA 105207 29 100.0 32 ............................. ACCTTCGGCGAGTCCCCGACGATCGCTGAGAT 105268 29 100.0 32 ............................. GAGACGAACAGCGATTGCCGTGCCAGCTCGCT 105329 29 100.0 32 ............................. TTGTAACGCTGGCTTACATGCTCGCCCTCACC 105390 29 100.0 32 ............................. GCGAAGGGTGAGCGACTGCCACCAGCGCCCCC 105451 29 100.0 32 ............................. CTGCCACCACCGGGTACACGGTGATCGCTGTC 105512 29 100.0 32 ............................. GTCGTCGCCAGCGTCATAGTCTGGCCATGGAT 105573 29 100.0 32 ............................. CGACGCTTGCGACCGATGCGAGACCGATGAGG 105634 29 100.0 32 ............................. TGATCATCGATACGTTCGATAAAATCCCGGCG 105695 29 100.0 32 ............................. ACATATTGCCATCTGGACAACATTTTTTTTGG 105756 29 96.6 32 ............................G TACTACGTCGACCTCGGCTTCCTGACCGCGCT 105817 29 100.0 32 ............................. TCACGATTGGCACCTCTCGTACGCTCAAGCGC 105878 29 100.0 32 ............................. TCGGGATGGGACACGCACGAACACGTCGACGG 105939 29 100.0 32 ............................. GAGACCATCGTCGGCGGTCCACCCCGTGAGCG 106000 29 100.0 32 ............................. ATCGTAAGAGACCTCTCTGGTTTTGAGGTTCT 106061 29 100.0 32 ............................. GCGACCCGGCCGACCGGCGCCCACCCGTATTG 106122 29 100.0 32 ............................. GCTTCACCCTGCTTTTGGGTCATACCGGCCAT 106183 29 100.0 32 ............................. GACGAATGGGGCTTCACGATCGGCTATTCCCC 106244 29 100.0 32 ............................. TCGCTCCTGCATGTGGACAAGCCCGACTGGTC 106305 29 100.0 32 ............................. ATGTGGCACAAGTATCGACGCGCCATGTTCCG 106366 29 100.0 32 ............................. TCGTGCGCCAGCGATGCCGTCGACCAGTCCGC 106427 29 100.0 32 ............................. AGGAAAGGCGCCTGGTCGTAGACCGCGCCGGA 106488 29 100.0 32 ............................. TACGTCAAGCTGGCGGGCAAGGCGAGCGCGAC 106549 29 100.0 32 ............................. GATCTTGTTGACAGAGTATTGTCCGCGATTGC 106610 29 100.0 32 ............................. ATAGTCATGCCGCTGGTCGCGATCGCGTGGCG 106671 29 100.0 32 ............................. GACGTCTCCGAGCGCGGCCAGCGAACCATTCG 106732 29 96.6 32 ............................G CAGTGCAGGTTCTTGATCCGCTGCCCGTAATC 106793 29 100.0 32 ............................. CCGGATGACAATCGCGAGAACATCGCCGACGA 106854 29 96.6 32 ..................A.......... AGGTAGGGACCCATGACGCGATGATGCATCGT 106915 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.8 32 GGTTCCCCCGCACCCGCGGGGATAGTCCC # Left flank : CGATAGAGCGCGTCGTGCGCCGTCACGCGGCACAGTTGTTCCGCCAGAGAGAAGTCATTCCCAGCATGATCGACAGGATCAAGCAGTTGCTTGCGCCTGACGCTCAGGCCGATTGACGGTCCTATCGAAAGCTATGCCCCTCGTCGTCGTCATCACCCGCGATGTCGAAAGCCGGTACAGGGGCTTTCTCGGCTCGGCGATGCTGGAACTGGCCCCCGGAGTATATGCGCAGCCACGCATGTCGGCAGGCGGGCGTACGCGCATTGCGGACGTCCTGTCCGACTGGCACAGCCGCCTTCAACGCGGCAGTATCGTGATGTGCTGGGCAGAACCGAAGGCGCACGGCGGCCTCGGCCTGCGAACCTGGGGAACCCCGCCCCGGGATATCGTGACACACGATGCCATGCTCTTGGTGCGCCGCGCTTGCCAAAGCCCGAGAAACGGTGAAGATGCGGGGCAACCCGATCTTTCCAAGCGTTAATAATGCGTTAGAATGCAGA # Right flank : CATGCTCTTCATGTCCTGCCGGACAGCTCGGGCCAATCGGCGTTGCAAAGCTGACTTACCGGTGTGTCAGACTGAGCAGACCTGAGCGGAAAAAAAGCACCGTGACCATCTTACCTGCCTGCCTGAAGCAATCAGCATGGCCAGATTGCCCGCACCGACAACCGCCCAATATTCGAGACAACTGAATGGACAACCGGCTGACCTGCAGAAATGCGGAGTTTTCAGAACGCTTGGTTGTCGGTCATGTCGAAGTTACGTTGTCTCCAAGACAACCCGGCAGGCACCAGATGCAGGGGCTCCCTTGGAAGACCGGCGCCGTTGGTCGTCGCTAGTCACGGTGGCCCATCGCGCTAACCATCCTTCGATGATCCGAAAAGCTTTCGGACCATTTCGGCGGTCCAAGACTTCCCGGTTGCGCTACGCAGGCCCTCCCCATCGAGTGCCAGCGCGATGTCGCCAAGCGCCAACCCCTCGCCATGCAAAGTGTCTGCGCGGGCCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCACCCGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //