Array 1 7232-6470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAINX010000016.1 Fusicatenibacter saccharivorans strain MSK.10.29 NODE_16_length_88912_cov_193.698, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7231 36 100.0 30 .................................... TGATAGATTGCCATACCTAATACCTCCATG 7165 36 100.0 30 .................................... AGGTTCTAATATTATTCCACTTGCAGGAAA 7099 36 100.0 30 .................................... TGAGGACGATTTCTATTCTGCAGGCATGAA 7033 36 100.0 30 .................................... ACCCTGTCCAGAAAAGCCTTCATCGACGAT 6967 36 100.0 30 .................................... ATCAGGAACAAACGTGAAAGTCGAAAACCA 6901 36 100.0 30 .................................... TACTGTATATGGTGCGAATGATGGTTTTAA 6835 36 100.0 30 .................................... CTGAAAACGTCATATGACGGCGTAAAAGAC 6769 36 100.0 30 .................................... ACGATTTGAGCGCGTAAATGACAGCTTCTA 6703 36 100.0 29 .................................... CGCTCGCTGCTCACTATCCATCACCGCCT 6638 36 100.0 30 .................................... TTTCCACCTCCCCTAAATCTGTAAGTAATG 6572 36 97.2 30 .........................A.......... ATTTTCAGGGCAAATTCTGCTAAATCGTAC 6506 35 80.6 0 ...................T.-...TT.TG.G.... | AC [6472] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.1 30 GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Left flank : AAAAACGGTTATTTACAGAGCTGGTCAAAAGTGCGCAAAATGAAGAAATGTTTCTGGAAACGCAGAGAATTATTGCGGAACTGAAGAAATACATCTATCAATTGGAAGCTGTCAGTGGGTACGAATTGGAACAAAATGAGGAAATCGATTTGAGCGCACTCCTAAAATTGATGGGAGTTCAGACAGAAACCGAAAAAGAGATGGGGCTTCTGGAAAAATTAACGCAATATATCAAAGTTATGGCCGAACTTCTCCAAAAAGAACTGGTGATTTTGGTCAATATTCGATCCTATCTGAACGAAACACAAATAAACAAACTCTCCCAAATGGCATGCTACTATGAAATATCCTTGCTTTTCATAGAAAATATACAAAGGGACTTTTCGAATCAGAGAGAATATTATATAATTGACAAAGATGGATGTGATGTCTATTAATATCCATCGGATGTTTGAGTACCTGTTTTGTGCAGATGAAAGCAGTTCATTTTTAAATTTGAG # Right flank : AAGAATAGATAATTCAAAATGAAATATTCAGAAGACAGTATGAAATCGACTTAATTGTCTTTTTCTTGCTGTCTTTTTCCTTGTCTCAAAGCGCCGCACCATGTATAATAAAACCACAAGAATTTCATTTCATAGTTTTTACAGGAGGAACCTGAATCATGATCCTTGCAATAGACATCGGCAACACGAACATCGTCCTTGGGTGTGTGGAAGGGAAAAAAACATACTTTATCGAAAGACTCTCCACGGACAAGGCAAAAACAGAGCTGGAATACGCAGTCAGCCTGAAAAATGTACTGGAACTGTATGAGATTCCGGTGGAGCAGATCGAAGGAGGTATCATCTCTTCCGTTGTTCCGCAGGTGACAGAGCTCTGCCGGAGTGCGGCAGAAAAAGTGATTAAAAAGCCGGTCAAAGTTGTCGGCCCCGGTGTGAAGACCGGACTTAATATCAAACTGGACGACCCCGCAACGGCAGGAAGCGATCTTGTTGTTGTAGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 28619-33416 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAINX010000001.1 Fusicatenibacter saccharivorans strain MSK.10.29 NODE_1_length_281156_cov_208.812, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================================================================================== ================== 28619 32 100.0 35 ................................ TTGATCGCCATCTCTTATGTCCTAACTTTAATCTC 28686 32 100.0 35 ................................ GGACTGATCACAAAAAAAGGAACAACAGTGCAGTA 28753 32 100.0 34 ................................ TGATCGCATCCGAAAGAACGCCGGACGGCAGAGA 28819 32 100.0 34 ................................ AATATATTTTCTAATGGCAGCGTTTGACTACCAT 28885 32 100.0 33 ................................ TCTTGAGTCCTACGTTCGTTTCTGCATGAGAGG 28950 32 100.0 35 ................................ GACTATGAAAAAGAATTAAAAAATGTGAAGGAAAA 29017 32 100.0 33 ................................ CATATATTGTCCACTGAGACTCGGTGAAGGCAT 29082 32 100.0 33 ................................ GTGTAATCATTACATGACCGGAACTGTCACATA 29147 32 96.9 33 ................A............... TGACCTGCGTTGTGGCTCGTGAGTCTGGCTCAT 29212 32 100.0 34 ................................ CGCGGAGCCTAAGTCCGTAAACGACTATAGGGAT 29278 32 100.0 34 ................................ TCCCATACCCAAGAGATAACCCTTGTCAAAATCA 29344 32 100.0 33 ................................ TTTGGTCACTCTTTTTGTTTCGATGCCGTTTTC 29409 32 100.0 35 ................................ TGTTTATTTCACGCCACACCGATACTGGCACTGTC 29476 32 100.0 34 ................................ GTATTGACTGCCGAAACGATGGCGGAGATGAACC 29542 32 100.0 33 ................................ GCCTGCTCCTCGCTCTGGATCAGGTCATTATCC 29607 32 100.0 33 ................................ TGCTGGTCCTCGTAGGCACGTACCTGCGTATCA 29672 32 100.0 34 ................................ CCAAAACCACTCAAACAACGGCTGCAACGCCACC 29738 32 100.0 36 ................................ GTGATGGTAACGAGGGAAACCCTGACAAGGGCCTCC 29806 32 100.0 35 ................................ TATACAGCAAATAGAACAGTCCTTCATTGCTCTCC 29873 32 100.0 34 ................................ ATCTAAATGGAAATTGTATTCAGGACGAACATCA 29939 32 100.0 35 ................................ CGTAATCAAGCCACTCTGTCACGGCTCCCGCCAAT 30006 32 100.0 34 ................................ GTCAGAATCTTGATACAAAGGGGGAATTTAAGGT 30072 32 100.0 34 ................................ TCAAGTTTTGACTTGATATCCTTGATATCCTCCT 30138 32 100.0 33 ................................ CGGCGGGACGGAAAAGAGATCCGCTGGCCAGAA 30203 32 100.0 33 ................................ CCAGTGATTTTTGCGTCAGCGGCGGCATTTTCA 30268 32 100.0 34 ................................ AAATGATGAGGGCATAATCTTAACCATAAGGGGG 30334 32 100.0 33 ................................ TGCTACAAGATTAGCGATTATAGCATAACCCTT 30399 32 100.0 33 ................................ ACTTTGCCAGCACTTAGGAGGTGGAAAGAATGA 30464 32 100.0 36 ................................ GGTATCTGTCCACTGGACAACCGGAGCCACCTAAGC 30532 32 100.0 33 ................................ TTTTTGTGCATTGATATTTTCGTTGAGCGAATA 30597 32 100.0 34 ................................ CATACATCCCGCTGTCAAAGTGCCAGAAGCACGG 30663 32 100.0 36 ................................ TATAATCGTGGTATCACTATTTTGATTGGCACTGTC 30731 32 100.0 37 ................................ TCGCAGCTAAAATAACATTAAAAAGTGGCGTTATTTT 30800 32 100.0 35 ................................ ACTGCATACTTTAATGAATGGGATGAAAGCGGAAG 30867 32 100.0 33 ................................ TTTAAGAAGCTGGAGCCTTGCTCCGGCGTCGAT 30932 32 100.0 34 ................................ CAGTATTATGAGCGGACTTGGCGACGTCCTGCGT 30998 32 100.0 35 ................................ ACACATTCCTGGAGTGGGCGGCCAACGAAGGATAC 31065 32 100.0 35 ................................ AGATTGTGTCAACTACAGATATTGGAGCAGAAACG 31132 32 100.0 34 ................................ TTGAAATGGCGGCGATCTTGTCATACGCTACAGC 31198 32 100.0 33 ................................ GTCTGATTACAACTTATTAGAAAATAAAGTTGC 31263 32 100.0 34 ................................ TTGTGTCTTTTTACTTTATGCGGACACAAATTTT 31329 32 100.0 34 ................................ TCGCCCAACTCCCTTAATAACTCACGCAATGATT 31395 32 100.0 34 ................................ AATTATATTTCTACCAACTTTTAATTTTACCATT 31461 32 100.0 34 ................................ CGCAGACAATCACGCAGGCGGAAGAGTCAACAGG 31527 32 100.0 35 ................................ TTCCGCGCGGTGAGTGCTTCGTCGACGAATGTATC 31594 32 100.0 35 ................................ TTGATGAGCTGTGTCAGCAGTATGACCTGGACGAG 31661 32 100.0 34 ................................ CGTGTTCCTTTTATAACAATACCACAGGGTACCA 31727 32 100.0 33 ................................ TGTGCAGACGGATACGGTGACAATTGTTGCCTA 31792 32 100.0 37 ................................ AATCCCCGTAATCTGGAAGACCTGTGCGAGGAACGCC 31861 32 100.0 34 ................................ GGCAACATGGACGCTCTCTGCGGAGACGGTCTGA 31927 32 100.0 37 ................................ AGTCGATGATGCTGAAAGAAATGCTGGAGGCGTGAAA 31996 32 100.0 34 ................................ AACTTGTTCTGATCCCTGTCCGACCAGATGTTGA 32062 32 100.0 34 ................................ TGACATTCGACCGGCTTGCCGACGGGCTGCCGGA 32128 32 100.0 34 ................................ AACCGGTACGAAGATCAGACCGGAAATGTATATT 32194 32 100.0 33 ................................ GGCGTATTCGTGACACCACAGGCGAACAACGTA 32259 32 100.0 34 ................................ AGCACATACGACGGCGGCTTTCTTTCTCCACTCT 32325 32 100.0 34 ................................ CGATCAGCTCCATGATCGTCTGATCCTGTACAAG 32391 32 100.0 35 ................................ GAAGCTTGGTGGAATATTACAGTCCGCAGTTGGAA 32458 32 100.0 34 ................................ GTTCCAGCTCATAGTCTAAAGCTGCGTGCATATC 32524 32 100.0 33 ................................ TCCAGAAGCCAGATGGAGACACTACACAGGAGC 32589 32 100.0 35 ................................ TGGGTTGATAGCGTTTGCGCCGGTATTTCGTACCA 32656 32 100.0 33 ................................ ATTCTTTGACTTTTTGGCTTAGAGAAAATTGTG 32721 32 100.0 33 ................................ TGCAAACACACACAGCCCGCTTTTTGCTGCTTC 32786 32 100.0 34 ................................ AAGGAAACAGTATACCGATTTTGCCAGCTCGTCG 32852 32 100.0 34 ................................ TTGCAAAACTCCTTAGATGTATTTTGATCGGCGG 32918 32 100.0 35 ................................ TGTGTGCTCTTAAAGTAATGACTGATGATGTAGAC 32985 32 100.0 36 ................................ TTTGCGGTCGCCATCCCCGGCTCTCCGTGTGTTACC 33053 32 100.0 35 ................................ CATATCTGGAATGATGACAAGAGCTATGATAAAAC 33120 32 100.0 35 ................................ TTGTTTTTTCCGGCATCATTCCGACAATAGAGATT 33187 32 100.0 35 ................................ CAAAATACAGTAGGTGTCATAAACTCGTTAGGACG 33254 32 71.9 99 .........T.TAG....A.AAA.G....... ACGCCATACGGTAGCACAATATCAGATACGATCGCTGCTATCTTAGCAGAAGAAAGAATGGAAATTTGACGCGAGTCATCGGAAAAGAAAAAGGAAATG 33385 32 78.1 0 ...A...A.....T......A..AG..A.... | ========== ====== ====== ====== ================================ =================================================================================================== ================== 72 32 99.3 35 GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Left flank : GTTACCACTTATCAACGAGTATGTATCCGAAGCATAGAAAGCGAGTATTGGAGCAGATACGAAAAAGATTGGACAAAAAGAATCCTCAAAAATGTATCGTAATTGCGACCAGTCTCGTGGAAGCTGGAGTGGATCTGGATTTCCGGACAGTATACAGACAACTGGCGGGAATTGACTCGATGATTCAGGCGGCGGGAAGATGCAATAGAGAAGGGGAGTATGATGTTTATGAAAGTAATGTGTTTATATTTCAATTCGATGAAAAAGAAACCGTTTCAGGACAAAGACAGCAAATTGATGTGGCAAAAAGTCTGATTGCAGAGAAAGTCGAGATTTCAGATTTAGGAACAATAAAAGCGTATTTTGAAAGACTGTATTACTTACGGGGAGAAGATCTGGATAAAAAGAAAATCCTGCAGAATTTTGAAAAAGGAAAATATAATTTTAAAGAAACAGCACAGAATTTTAAATTAATTGAAGAAGACACGGCCTTGAGACAT # Right flank : TAAGGAGGTGCGCGAGGATACTGCCCTACGATTGCAAAGTGTTCTCTAAGGAGTGAAATGTGTTTGACACGAAAGGCAAACAATGTTAATCTATAACTAGCGTAAGTGATAACTAACCGCTCATGTATTCGCCAAGAACCATGGGCGGCTATTTTTCTATTTATTATTCGATAAGAAAGGAGGAAAATGATGAGAAATCCACTGACAATTTTTTGGATTATACTCGGCTTTCTGTGCCTGGGATTTGGTACCATCGGCATTGTGCTTCCGATTCTGCCGACAGTTCCATTCTATATGGCGACCCTGTTCTGCTTTGCGAAAAGTTCGGAGCGGCTGCACAGCTGGTTTATTGGAACTCAATTATATAAGAAGCATCTCGACAGCTTCGTACAGCATCGGGCGATGACGGTAGGAACGAAATGTAAAATTATCGGGATGGTAACGGTTGTGATGGCGATCGGCTTTTTTGCTATGAAGAATGTGCCGATCGGAAGAATCTG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //