Array 1 417488-419650 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036267.1 Thalassoglobus polymorphus strain Mal48 chromosome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 417488 36 100.0 36 .................................... ATCTGACAAGTCACCCCCTTATTTTACCCCTTACTG 417560 36 100.0 37 .................................... GCAAAGCCGCAACCCCTAAAATCCAGTGAACAAGTTC 417633 36 100.0 38 .................................... TTACCGAGAAGCATCTGACTCCTCTGGAAGTGTTTACA 417707 36 100.0 37 .................................... GAGAACCAACCGAGGCTGAACTTGCCGAATTCAAATC 417780 36 100.0 39 .................................... ACGTCGGCAGCCTGCGCCTCTTTGCAAAGTATGGTAAAG 417855 36 100.0 39 .................................... CTGACTCCGTTGATCAATAAATCGAAGTCAACATCCGTT 417930 36 100.0 37 .................................... CGATACGGCGGCAAAGCTTCCGCACCGGCCCTGTTGA 418003 36 100.0 37 .................................... TTACGAACCCTGGCGAAGTTGGCCCGGAAAACGATAC 418076 36 100.0 39 .................................... ACGGTCCACAATGGGAGATCCCGAGGGAGTCCCAGAGGA 418151 36 100.0 37 .................................... GAAAAGGAGTGGGAGTAATGAAAACTGAAGAAGTTCG 418224 36 100.0 38 .................................... AACAGCGGCTGCTGGTTCGCTTGTCGTTGCTGCAGGTC 418298 36 100.0 37 .................................... TTCTGAGGTTGTACCTCATCACAGGGTTGTCCACATA 418371 36 100.0 37 .................................... GAATCTAACACAAACGATGTACCGCCGCCTCCAGCCC 418444 36 100.0 35 .................................... ATGCTAAACGGCGGCATGGTCTCAGGGAATGAAAT 418515 36 100.0 36 .................................... GTGACGGATTACGCCCCCATCTTGAGACACAGCAGC 418587 36 100.0 40 .................................... GACGCAAACACCTTGCGGGAAAGGTTGGGAATCCCCCCAA 418663 36 100.0 38 .................................... AGCCAACTAGACGGAGTAAACAAATGTGTGACGATGTG 418737 36 100.0 36 .................................... TACTACGCGAATTTTATGGTAGAAAAGTACGGAGCA 418809 36 100.0 37 .................................... TGGGTTCGCGCCCATACGATGTTCGTTGACCATGCGA 418882 36 100.0 38 .................................... GTTGTTTGCACAACAGTACAGACTCTGAACTCAATCAG 418956 36 100.0 38 .................................... CGAACTGGTGAGCTATGTCATACCGACGTATTAAAACG 419030 36 100.0 40 .................................... TCGCTGACTGCAGCAATCTCAATTCCACCATACGAAACGG 419106 36 100.0 35 .................................... TTTCTTTATAAATAACCCCCCTTTCTGGACAAATC 419177 36 100.0 38 .................................... CGATCGGGGCGTCGTGAAATACTCGAAGCACGACATCG 419251 36 100.0 39 .................................... GACCAGCACGACGAACTTTCCAACGCTGAACAGAAGTGG 419326 36 100.0 36 .................................... GAGCATTCCTGCGATTCCATCGAGGACGGTAAAGCG 419398 36 100.0 37 .................................... GACAGACTTGCAGGTTGCGAGTAGTGCTCGGCTCCAG 419471 36 100.0 36 .................................... GCATGGATTCTGGGGGGCAGGACCAAACCCAAGCGT 419543 36 100.0 36 .................................... GCCGATTCCTCCACTGGCTCCTGCGATGGGTGAATT 419615 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 30 36 100.0 37 GCTTCAATGGGGCCGCTCTTTTTTAGAGCGGAGGAC # Left flank : TGTAGTTATTCTGTGTAGTAAATGGCGTGGGAATGATCGGCGGCAACCGACCTGCGTGGTGGTAAGGAATTGGAACATGGCGTCTTTCTATCAATCGATGCGCGTGCTGCGCGATTCGTGAATTCGTGCTCCACCACTCATTGGAGTGCGCAATAAAAAACCAAGAGACCACGGGCGGCAACCCGTATTACGGCCCCTTGGCGGCAAGGAACCGAAAACGGTTCCGTACGCATTCTCACTTCTTTTCCTCAAAAGTTCAATTCTCAGCGGCTACTGGGACAACCTCGAAAGGTATTTAATAATCATGGCAAGGAAAGGAAAACAGCGGCGTCAGCATCATGGTTCTGCGTGGCACTGGAAGCAGCCGGATACGTGGTACTACACGGAACCAGGCACCAGGAAACGAGTCGCTCTCTTCGATGAAGGCGGAGAGCGGATTCGTGGGAAAGAGAACAAAGAAGCTGCACGGCTACGCAATAGCTTCCTTTGCTGTCATACCC # Right flank : CCGCCCGCGTTCAAAGTCGCTAAACTGAAACGAGTTGCAACGACGATTTCGCGGGGTCGGTGAAAATGGGGTTCTAAAGGCATCTTATCGTAGGCTCAAGTTTCTTACTGGTTGCCAAAGAACGACTTACGGCTGCGAGGGCTAAGAGGTGTTTTCAGGCCACCGGAGCCCTCGAGTCTAAAAAAGTCTAAATAATTGTAGCAGATCTCTCGTGCGGAGTAACTATCGGATCGCCCCAAAATTCAACGCAATTGTCTCCACGACCTTCAATCGGGCCGAGGTCGACAATCATGACTCGGTCCTCATCATGGTTGAGTAGCGGCCAGAGTAATTCTTTCAGGGAGTGTAATTCTGTGTCGGTCAGTTCAGATCGAAACACCGAGTACTGAAGGGCTTCGCCATAGCCACGCATGATCGGATAAATTTTCCGATATCGCTTGGGGCAACTAATGTCATAGGCAACAAGGTAAACGCTTCTCATGGCTGCGGACTCGCTGAGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCTCTTTTTTAGAGCGGAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.00,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 1468411-1466984 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036267.1 Thalassoglobus polymorphus strain Mal48 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1468410 36 100.0 38 .................................... CTGGGGTGATGTCGGCTGCGGGACCACGCTTGCCGTCG 1468336 36 100.0 38 .................................... TTACGAACACGACAGCGCCAATTACGATCCCCAGAATG 1468262 36 100.0 37 .................................... TACTATAAATCTTTTTTTCATTTAGATTTGCCTCAGG 1468189 36 100.0 37 .................................... AAGGTGTCAAAATGGCTCTTAATTCAATCACTGCTTC 1468116 36 100.0 38 .................................... TGCCGCTATTCTATCAACGATAGTTATACGATTTTCGA 1468042 36 100.0 37 .................................... ATCCTTTCTTGGGTTTGCCGATTTTTGGCGGTTTTCC 1467969 36 100.0 38 .................................... ATTTTCATGTTGGAAGTTTAGAATATGATAACCACTAA 1467895 36 100.0 37 .................................... AAAACACCTGAAAGTGAAACTTTACCTTCCGAATCAC 1467822 36 100.0 36 .................................... ACCTCGCGTGCTGTTTTGCGGCTTCGACGATGTCGA 1467750 36 100.0 36 .................................... GGTAGGCTGCGATCCGCCATTCGTAGTAAACGTCCG 1467678 36 100.0 37 .................................... TGCGGGTGTGAGCGGTGGCAAGTCTTGCAACGACAGC 1467605 36 100.0 37 .................................... ATCCTTTCTTGGGTTTGCCGATTTTTGGCGGTTTTCC 1467532 36 100.0 38 .................................... ATTTTCATGTTGGAAGTTTAGAATATGATAACCACTAA 1467458 36 100.0 37 .................................... AACCATATCACCCATTGTGGTGAGTTCAATTTTTCGG 1467385 36 100.0 39 .................................... CCGTTGATTGGGACTCGGTAGTACGTCCCCCCATTATAC 1467310 36 100.0 36 .................................... CAGTCTTAGTCATTTTCACTCTCTCTAGTTAGTTTG 1467238 36 100.0 37 .................................... TAGAGATAGACCAGGGCGGCGGCGATCGCCCCGGCGT 1467165 36 100.0 37 .................................... GTCTCAATCGTGATGTCGTCACAGAGTTGGTTGCTGT 1467092 36 100.0 37 .................................... GCCAATCAACAGACTCTGGCAACAACAGCCGTGAAGG 1467019 36 97.2 0 ...........................T........ | ========== ====== ====== ====== ==================================== ======================================= ================== 20 36 99.9 37 GTCCTCCGCTCTAAAAAAGAGCGGCCCCATTGAAGC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGACTTTTTTAGACTCGAGGGCTCCGGTGGCCTGAAAACACCTCTTAGCCCTCGCAGCCGTAAGTCGTTCTTTGGCAACCAGTAAGAAACTTGAGCCTACGATAAGATGCCTTTAGAACCCCATTTTCACCGACCCCGCGAAATCGTCGTTGCAAAGTGTGTATGCTTAGCGACTTTGAACGCGGGCGG # Right flank : ATCCCAGCTACGACAATAATACTGTTTCAACTTCTCACGCTTCATACAAACGGGGTGCGAGTGTTGACCGATCGGTCTAACCATCGTAGGCTTAACCGAGGCCGATTGAACCTTTGTGAGTTATGAATGCCGTGGGAAAAATCATTTGAAGAGTCGGATGTGATCGAACAGGCGATGAATGTCTTCTGGGAGAAGGGATATGCTGCCACCTCGATCTCTGACATCACAAACGCGACAGGAATCAAACGAGGCAGCCTCTACAACGCCTTTGACGGAAAGCATGACCTTTTCGTCCGCGCGCTGCTGAAGTACTGCGATGAGCTGAGAACAAGTAAACTTCGAAAGCTGGAAACAGTCGCTGATCCACGTGAAGCGATCAGGATGTTTTTCGACTCGCTCGTAAAGGCAACGCTCAGCGATCCCGATAAAAAGGGCTGCTTGCTGTTCAATACCGCACTCGAATATTCGTCACACGACGATGACGTCAAAAAACTCGTCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCGCTCTAAAAAAGAGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.00,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 3 1950133-1951734 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036267.1 Thalassoglobus polymorphus strain Mal48 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1950133 36 100.0 35 .................................... AATATGAGCCATTTGCTTTTCGCAAGCCGAGGAGT 1950204 36 100.0 38 .................................... ACAGTGAGAGAATCAGGAGGGTTATGAGTGTCTTCATT 1950278 36 100.0 35 .................................... TCTTAGCCTCCTTTTCTTCTTCCTTACTGTACCAC 1950349 36 100.0 37 .................................... TCGTAAGCAACGCGACGACCGTTGACCGTCTTGAAAC 1950422 36 100.0 35 .................................... TAAGCCTCCAGAGTCGATCCGTCGTAGCTCACCGT 1950493 36 100.0 36 .................................... TGTCAATATCCGATGTAGTCTTGCCAATACCTTCAA 1950565 36 100.0 34 .................................... AGAGAGATGGAGGAACACCAAGCCTTAGACACCT 1950635 36 100.0 36 .................................... AATGGATCGGAGAGGCGACGGAGAAAACAGCGAGTC 1950707 36 100.0 36 .................................... TCCTGGTTTTTGTTGCCGTTGTGGCGGAAGTAGATC 1950779 36 100.0 35 .................................... CCGAAGATTCCCAAGCAATACCTACAAACACAGCA 1950850 36 100.0 26 .................................... CGCCAGAGGCGATTGCACAAGCACTC Deletion [1950912] 1950912 36 100.0 36 .................................... ACAAAACGTACTGCACTCATAGAGGAAATGTGTCTA 1950984 36 100.0 37 .................................... TTGAGACGGTTGATATCTCCGATCAGATCACCATGTC 1951057 36 100.0 35 .................................... TTCTTCCTGATGTCAGATTCGTTCATCCAGAGAAG 1951128 36 97.2 34 ........T........................... ATCTCCGCATTGACGAGCATGATCACGATTTCGA 1951198 36 97.2 35 ........T........................... GGGAATTCAGCGAAGAGGATCGCAAGGAGCACCGC 1951269 36 97.2 35 ........T........................... GTTTGGAACCACGGATTTCATCGTGCCGGCAGAAG 1951340 36 97.2 36 ........T........................... AAAGGTTCTCCGGCGTAGGAGCCTTTCGTGTGGCTC 1951412 36 97.2 35 ........T........................... TCCAGACGATCAATGAATCAGACATTGAAAGCCAG 1951483 36 97.2 37 ........T........................... ATAAGAGCAGCAACCGGGGGCGACCCCTATGAATCCT 1951556 36 97.2 35 ........T........................... ATAGTCGGTTCAACAAAACCTTGCTGTGGTAACTG 1951627 36 97.2 36 ........T........................... TTTGAGTGCATCTAACCCCAACCCACCAAACAAGTT 1951699 36 97.2 0 ........T........................... | ========== ====== ====== ====== ==================================== ====================================== ================== 23 36 98.9 35 GTGATTCTACCGATGACGCCGTAAGGCGTTGAGCAC # Left flank : CTCTAAAAAACTTGAAGCCTATGGTAGCCGAATTCAATACAGTATTTTTCGCTGTCGCGTCGACGCCGAAACACTCGCAAAATTACGTTGGGAACTCTCAGAGATCTTGGACACGATCGATAGCCTGCTGGTCATCCCAATATGCACGAAATGCGCTGGCAAAGTCCCGGTTCATTCCACTCCTGACCAGCATGGTTGGGCCGATGACCCACCAACGTTTCAAATTCTTTGAATCATGTATGATGTCGTGGTCGATGAATTCGCATCACTGATGAATGCAACATGTTGCAATTACGAAGGTTATCAGTAATAGCCTGCGACGAGAACCATGATCCCAGTTAGCGTTTTCGTAAATCCGTGTTGTGAAATGTGTTGTTCCATAGGATAAGCTGGCTGCAAATTTCTGGATTGTTCTTTGGCAATTAATTTATATGGGAAAGTGGGATGCATGATACGCCGCGACATAACCTCTTGCAGGTTTTAAGGTTAGGGAGGTCGTT # Right flank : CTGGAAAATTGCTGGCAGAGTAATTGTCAATTGTTGACGGGGCGGCAAAAAGTCTGGTGGTTGGAGTTGTGTCGATTTGGTTTCGCAGTAAATTCGCGTCATGTTTACCCTACGCGACCATCACAGCGGCGATCACAGCGGCGATCTGTTCGATCCTTGGGATTATCTGGGGCTCAAGCGAAGGCGTCTTCTTGATCGGAGTTGGGCCGGAGTTTTCAGGGACTATTTGTTGAAGCAGCTTCCCGTCCGCGAGCTTGCTACCGAATTCCGCGATGATTTTGGGCGTCCGACGAAGGATCTCTTCGTCGCGCTGGGTGCGTTGATTCTTCAGCAACTCCATGAATTCACCGATCAGCAAACCATCGAAGCAATCGCGTTGAATATCCCTGGCATTAGCCGTCCGCTCTCTGAGAGAAATTCAAAACTATACCTATTCAGATTCGGTAGATCGTAACTCACGGGCAAGCCAAGCCTTGGCGTATCTCCAATCGCTGTTGACT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATTCTACCGATGACGCCGTAAGGCGTTGAGCAC # Alternate repeat : GTGATTCTTCCGATGACGCCGTAAGGCGTTGAGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //