Array 1 2886-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZP01000037.1 Haloterrigena hispanica strain CDM_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2885 30 100.0 36 .............................. GAGGCTTTGTCGACGAGGATCCCGTCGCGCATCACG 2819 30 100.0 33 .............................. TCGAGAACGGTCTTCTGGCGGTCCTCGAACTCC 2756 30 100.0 37 .............................. TTTGACCGACTCAACAGGGCGCGGGTAGACTGCGCGC 2689 30 100.0 37 .............................. GTCGACGAATCGAAGGAGCGCTACGAGGCACTCGCGA 2622 30 100.0 37 .............................. AAGTGCGGTTGCTCTGACGTCCGGAACGAGTGGGGCG 2555 30 100.0 37 .............................. AGCGACGGTGCGATCGAGCCAGCGAGTAGTTCGATCG 2488 30 100.0 35 .............................. CGCAGCTACTACGACGAAGACATTCGAGAGTTGGC 2423 30 100.0 35 .............................. ACAGACAGGAGTCGGATGAAGTGTCACCACACGCG 2358 30 100.0 35 .............................. CGTTCAGACGGCTCTATTGACCCACTGAGCGAATC 2293 30 100.0 36 .............................. TCGCTCGGTACGGCACTCGAGACAGGCAAAGGCAAT 2227 30 100.0 37 .............................. AGAACTGGGAGGTTGAACGTGTCGCTGGCGGCGAGGC 2160 30 100.0 35 .............................. GGCGACCGCGGCGGCAAACACGATCGTGAGCGACA 2095 30 100.0 37 .............................. TGTCGATACCACCGCGACCAGTGGGAGGACGATCCAG 2028 30 100.0 36 .............................. AACGAACACGCAGACAACCCGGATTTTGACCCGTCG 1962 30 100.0 36 .............................. TCTCCCTCGATCCACTTGCCGAGGACGTCTCGCATG 1896 30 100.0 37 .............................. TGCTCCTGTTCGTTGTATGTCTTGTCCGTAACACGGA 1829 30 100.0 36 .............................. ACGCCGCCGAGGAGCGAGGGGACAGCGCCGACTACG 1763 30 100.0 34 .............................. ATCCGATGCTGTGGCGCGTCGGGAAGATCGTCAA 1699 30 100.0 37 .............................. AATATGCGGACTCTGATACGGAGTGGACAAACGTAAC 1632 30 100.0 35 .............................. GAGGGCAAGCCGATCACGCTCGCCGACAGTCTCGA 1567 30 100.0 34 .............................. TGGGCGGCGATGACGTCCCGGACTTCGCGCCTCG 1503 30 100.0 37 .............................. GAGGCCTACATCCACGGCATCATTTCCTGATATACAT 1436 30 100.0 37 .............................. GGCTGGGAAAGCACCCGCCGTGCGCTCGACGTCTCGA 1369 30 100.0 35 .............................. AAAATCGAAGCCGAGGAAGACGAGTCGCCGATCAA 1304 30 100.0 36 .............................. GAATCGAGAACTCATAGCAGGATGCTGAATGTGGGT 1238 30 100.0 37 .............................. GTGATCACGCCGATCTCGTGGACCTCCTCGAGGACTC 1171 30 100.0 36 .............................. CTCGACGACCTCCTCGACGAGACGACGACCCAGGTC 1105 30 100.0 35 .............................. AGAATGTGGAAACGAGTACCCTGTCGGTGGGGACA 1040 30 100.0 35 .............................. GCTTGCAGTCCATGTTTCCCCATTCCCAGGCTCTC 975 30 100.0 36 .............................. GGGACTGAAGCCGGCCCAGCGATGGCGGCACTGATC 909 30 100.0 34 .............................. CGCAAACTCCGAGACATCCCCATCGACCAGACAA 845 30 100.0 35 .............................. TCGAACAGAGCTACGGCGTCGCCGAGATCGTTAAA 780 30 100.0 37 .............................. GGACCACTATCTCACCCCTGAACGTACCAACTTTGTA 713 30 100.0 38 .............................. ACGGTTCCATCCCCACACAGTCATATTCGATAGACCGC 645 30 96.7 38 .............T................ AATCCCGAACGCAACGCTGCTCGAGGAACGTGGCCCGG 577 30 100.0 36 .............................. GCGGCTGTGATCTGTGCCCCTCCACGATCGGATAGA 511 30 100.0 37 .............................. TCGTCCTGAAGCGCCTCGGCCATCATGTTCTCGACGA 444 30 100.0 36 .............................. CAGATCCCCATCGGCTGCTCGGCACCACGACGGTCG 378 30 100.0 38 .............................. GGATACGCGTAGCGTTCCTTGTCCTCGAGCGAGAGATC 310 30 100.0 36 .............................. TTGATCTTGCCCTCGGCCTCGAGCAGCCGGACAGTC 244 30 100.0 36 .............................. CAGAGGATGTCGCCCACAAAGATCGGATTTGTGGCA 178 30 100.0 36 .............................. TACCAGCTTGGTCTCAGGTATACTCGAAATCAATTT 112 30 100.0 34 .............................. TGCAACCTACTGCTCGAACGGGTGCCAGTCCGAA 48 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 44 30 99.9 36 GTTTCAGACGGACCCTTGTGGGGTCGAAGG # Left flank : TTGACCACCCGGACTTGGGAAAGAAGGTGAGCTACCAGTATCTCCTTCGTGTCGAAGCGTACAAACTGAAAAAACACCTCCTGACCGGCGAGGAGTACGTCCCGTTCCAACGGTGGTGGTGAGTGTGGTCTACATTGTTGTGGTCTACGACATGGAAGCCGATCGTACTCACAAGATGCTGAAGTTCCTCCGCAGATATCTCACACACGTGCAAAACTCCGTACTTGAAGGAGATGTGACCAAAGGCGACCTCAAAAAGATCCGATCCGGCGTCGACGAAATACTCAAATCCGGAGAATCAACTATCATCTACCACGTCTCCTCTGAAAAGATGGTCGAGAGAACCGTCTTTGGTGACGATCCTGCCGCAGACGATCAGTTCCTCTGACTGTCCTCGGTTGTTCCATCGACCCCTGGGGGTACAGAGGTTATCGCAGGTCGACGGAAACGATGAAGTGTAAACAGTCAATAGAGCTATTTACGTGGTCTAACCGGCCATG # Right flank : GGACCATCTTCGATGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTCGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 11182-10365 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMZP01000054.1 Haloterrigena hispanica strain CDM_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11181 30 100.0 35 .............................. TTCCCGATGTCATCCATTGATCGACCCACGACACC 11116 30 100.0 36 .............................. GAGGCCGCTGCTGGCACGGCGACGTGACGATCGAGG 11050 30 100.0 37 .............................. CGGGAATAGCTATCACGTTGATCCTGGGTGCCAGCAC 10983 30 100.0 37 .............................. CGAGGTGACGACCGATGACGATCGTCCGAGACTACGA 10916 30 100.0 34 .............................. CTTATTTTGATGTTTGACGAGCCATTTCGGACGG 10852 30 100.0 35 .............................. GAGGCGCATCTTGCTGACGGGAAGACGCTGCCGGT 10787 30 100.0 36 .............................. AGGCACGACTCGGGGACACCGTCGGTCTCTTTGACG 10721 30 96.7 33 .............................A GGGCTGGCATGGGGTAGCGGTCATACTGGATCG 10658 30 96.7 37 .............................A TCGGTCAAATCGGTCTACGTCGAAGGCGAGGAAACGA 10591 30 96.7 36 .............................A CTGACGAGTCCGGCGAGGAGAAAACTGGCCGTGACT 10525 30 100.0 36 .............................. GACGAGGAGGTGCGCGACCGATGACGCTCGAGTGCC 10459 30 96.7 35 .............................C CTGACGCAGGTGAACGACTATCAGCTGAACCACAA 10394 30 80.0 0 ...A...C..A.....C..C.........C | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 97.4 36 GTTTCAGACGGACCCTTGTGGGGTCGAAGT # Left flank : TAGATCGTGCTGTAGTCGGGGAGGTTCTCTCGATCGAGACCGAGTACGTCACAAATCTCGGTCATGTACTTCAACCGATTCGGCGTTTCACGGTAGCTGTGACCTTCTTCGAGCCGAAAACAGTGTAGGACGACATGGACCCAGCGGGCGAACCCGCCGCTGGCGGGCTCGCCCGCGTGCTTCCCCAACGCTTGTTTGGCTAGGTCACGACACTGTTCAATGAAGTCGAGGAGATCGATTTCCATAGGACAGAATCGAATTCCTCGGCTTCATCCTTCTAAGCCAGTGATATCGGCTGATTAGATCGCTTTTCAACAGAGCAAAGTCAGGG # Right flank : ATCGAACAGTGGGATAAACATCTTGTTTCAGACTTACAAAGAGTCGATCAGATGGGATGATCTCGGAGAGAGCCACGGCCATGAGACTGGCCGCGTGGAACTGCAATCAGGCGTTCCGCCGGAAACAGCACCACCTCCTCGACCTCGAACCGGACATAGCGGTCGTGCCGGAGTGCGAGGATCCCGAAGAGAAGGGCGACTGGTCGTCGTGGACGGACTGGGAGTGGACGGGCGGCGACCCGCACAGGGGCATCGGCGTGTTCACCCGAAACGACATCGCCATTTCGGACACAACGGAGATTGCCGAGGCCGACCACTTCCTCCACGTGGAGACCGATGCCGTGGACGTTCTCGCCGTGTGGGCGATGAACGACCGAGAGAACCCGCGACAACGCTACATCGGTCAAGTCCACACCGCCCTCGAAACCCATCCCCAGTTGGTCGACGAGGACACGATCATCGCCGGCGACTTCAACTGGAACGTGACGTGGGACGAGTCG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTCGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.10,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //