Array 1 2286-3107 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LIUZ01000047.1 Escherichia coli strain 146 contig000047, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      2286	    29	  96.6	    32	............................A	AATACAGGACCAATATTTTGATATATATAATC	
      2347	    29	 100.0	    32	.............................	GTGATTCTGGCAATACTGGCACTTCCGTTTTG	
      2408	    29	 100.0	    32	.............................	GGCGGTTAACTGGTCCTGTGCGGATATGCGCT	
      2469	    29	 100.0	    32	.............................	ATGTGGAAAGGCGAGCTGAGGGTGGCCTACGC	
      2530	    29	 100.0	    32	.............................	GAACATAACGATCTCGCCTGAATCTTGATAAG	
      2591	    29	 100.0	    32	.............................	AATTGAGCGCTCCAAATCCGCAATATGGGGAC	
      2652	    29	 100.0	    32	.............................	TTGCCGGTACAGCTCCAGCATTAATCCCCACC	
      2713	    29	 100.0	    32	.............................	TTGCGACGTGGTGCGCGCTCGAGCACAACGTT	
      2774	    29	 100.0	    32	.............................	ATGTAAACCCCTCGCGCATCGAGTCAAATGTC	
      2835	    29	 100.0	    32	.............................	TCTGCAGAGTATGAGATCGCGCTCCTCGGATA	
      2896	    29	 100.0	    32	.............................	GAGTTTGTGAATTTAACAGAATTCCGCGCCCG	
      2957	    29	 100.0	    32	.............................	AGCGAGAATGAGGCCGCTCAGGTGGCTAGTCA	
      3018	    29	 100.0	    32	.............................	TCGAGCGCCTCGCCTTTTAACTGATGCCGTGG	
      3079	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  99.5	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACTCGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.24,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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