Array 1 209758-210944 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AMQY01000010.1 Halomonas jeotgali Hwa 50.KUC.1_10, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    209758	    29	 100.0	    32	.............................	GCTTCTGTACATGCGTGGGTTTCACCTCGGTC	
    209819	    29	 100.0	    32	.............................	TCGTCGCCCATTTCCTCGATGGATGCCATCAG	
    209880	    29	 100.0	    32	.............................	TGCGCAGTGTTGGTGCCGGCAGTCGGTACAAC	
    209941	    29	 100.0	    32	.............................	ACATTTTGGCGGGTGCGTTGGTTTTCATGGCC	
    210002	    29	 100.0	    32	.............................	ACCGGGCAGCAATACCAGACCGTTTCGGGCGC	
    210063	    29	 100.0	    32	.............................	CCCGCGAGAGCAGCGGCAACAGCGTCTCCCGG	
    210124	    29	  96.6	    32	............................T	TCAGATAAGAACAGCCCCGGGGGCAATGAAAA	
    210185	    29	 100.0	    32	.............................	AAACGTGGCGCTCTGCCCGTATGGGGCGATTC	
    210246	    29	 100.0	    32	.............................	GTAGAACGAAGCGACCCAGCCGGAGAAATACC	
    210307	    29	 100.0	    32	.............................	CAAGAACGACCAGCTCTCCGCCAGCGCTGCGC	
    210368	    29	 100.0	    32	.............................	GCCGAGTCGTCCTGTTCGATGGCGTTGAGCCG	
    210429	    29	 100.0	    32	.............................	CACACCTGATTGATGAGGCGCAAGCCGCTATG	
    210490	    29	 100.0	    32	.............................	TATTGCCGCAAGGGCAGCAAGGTGTACGTGGA	
    210551	    29	 100.0	    32	.............................	TCAGTGATGGGTACGTGGCGCATGATGGAAAA	
    210612	    29	  96.6	    32	.T...........................	CCAGCCGGGGCCGCAAGGTCACCAGCATGGTG	
    210673	    29	  96.6	    32	.............C...............	CCCGTCATACAGATAGGCCACAATCAGGGCGT	
    210734	    29	  93.1	    32	.....A.......C...............	AGTGAAGCTATAGATTTGCTTAAAAGGATTAT	
    210795	    29	  93.1	    32	.............CT..............	TTTAACAGGTCATTTGTTCCTGATAGTTGTGC	
    210856	    29	  93.1	    32	.............CT..............	CCCGCCATTGAGCGGGCTTTGCTGTGTCTGGG	
    210917	    28	  72.4	     0	.............CT......-..CGTGT	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  97.1	    32	CCGATCCCCGCACTCGCGGGGATGAACCG	                                	       

# Left flank :   TACCCCCGCCCGAAGCCGTTCCGCCTGCCATCCCCGAGCCGCCTGCCATCCCCGAGCCGCCTGCTATTGGCGATGCCGGCCACCGGAGTTGATGCAATGGCAATGCTGGTTGTGGTGACGGAAGCGGTACCTCCCCGTATGCGCGGCCGCCTGGCTATCTGGTTGTTGGAAGTGCGAGCCGGTGTCTACGTGGGAGACGTCAACAAGCGCATTCGGGAAATGATCTGGGAGCAAGTACTGACACTTGCCGAAGATGGCAACGTCGTTATGGCCTGGGCGAGCTCGCATGAATCGGGCTTCGAGTTTCAAACATACGGCAGTAATAGACGGCAACCCATTGATTATGATGGATTAAGGCTGGTGCGATTTCTTCCGGAAGAGCGTAACTAGCTGTTTTAAAAAAATCTTTAATAATTCAGCTTAATGAAAAAAGGGGCAAAATAGCCGGTGAAATTTCTGCCGGCTCATTTTCCTTTGTAAAACAGATGACTATAATTAGT
# Right flank :  TCAGGGTTGATGCTCAGGGGCACTGGCTGCTACGGGCAGGCTGCCTTTGACGGTTGGCGCCCCAACGTGCAATTTTTTGAAGCACCTGAAACAATAGGCGCGTTTTTAAGCTCAGCTACGCTTACCCCGGAGACGCTAATGTCAGCCAAAACGCTCGCCCTGATTGAAGAGCATGATGTGAAATGGATCGATATGCGCTTTACCGATACTGTCGGCAAGGAGCAGCACGTCACGATTCCGGCGCGGGACGTGGATGAAGACTTTTTCGAGGACGGTCAGATGTTTGACGGCTCGTCGATGGCCGGCTGGAAGGGCATCAACGAGTCCGACATGGTGCTGCGCCCGGAAGACGGCACGGCCTATCTGGATCCCTTTACCGAGGACGCGACCCTGGTGCTGCGCTGCGACATTATCGAGCCGGCGACCATGCAGGGCTATGACCGCGACCCGCGTTCGATCGCCAAGCGCGCTGAGGCGTTTTTGCAGTCGACCGGCCTGGG

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCGATCCCCGCACTCGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-33.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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