Array 1 670839-677982 **** Predicted by CRISPRDetect 2.4 *** >NC_008553.1 Methanothrix thermoacetophila PT, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 670839 37 100.0 37 ..................................... TTTCCGGATTAGAATAATAAGGAACTTCCGGTACGGG 670913 37 100.0 37 ..................................... GGTATACTAAGCGTACCGTTCGTCTCAACATCGACTA 670987 37 100.0 37 ..................................... ACACCATATGCTCCGGGCAGAGGAGCATGTTCACACT 671061 37 100.0 36 ..................................... CCAGTCCTCCTCCTCAGGAGGACTGGCTTTTTCAAA 671134 37 100.0 34 ..................................... CACAATAAATCCCCCTTTGAAAACGAGTTCAAGC 671205 37 100.0 38 ..................................... TATGTAGCTGCATATCTACACCTCCACGGATATAAGAG 671280 37 100.0 37 ..................................... TCTTCTGGCTCTGGCACGGCGAGAACTATCTCGCCGT 671354 37 100.0 36 ..................................... TCCAAATTACCAAGACAAACATGCTTGTCATGGGTG 671427 37 100.0 38 ..................................... CTGCGAACTTTGCCATGAGCACCTCTTCGTGAGGTGCT 671502 37 100.0 38 ..................................... GATGATTAATCTCATAACTGGTGAGATTTTCGACTCTC 671577 37 100.0 36 ..................................... CCTGTTGATGGTGCTCAGTGACGTTTCGATAGAAGA 671650 37 100.0 36 ..................................... AACTGATTTCCTTGTCGGCAAATTTGTTGTTGTAGA 671723 37 100.0 37 ..................................... CCTCCTAGCCCTTTATTCGCTGGCTGGAGCTTCTGCT 671797 37 100.0 35 ..................................... TACAATTCCTTCCCGCACTCTGAGCACCTCACGAA 671869 37 100.0 36 ..................................... AGATGAACTGATACCAGTTCACCTCGGTCGTTTCGA 671942 37 100.0 36 ..................................... GGAAATCCCAGACCCCGCTGAGTGTATCTTTCAGTT 672015 37 100.0 35 ..................................... TCCATTCTCGAGCGGAAACGCGCTCGGGCCGAGGA 672087 37 100.0 36 ..................................... ACTGCCTGCTGCTCAAAGCCGGCGAAGGTGAACCTG 672160 37 100.0 37 ..................................... AGGTATCAGGAGACCTGCGGAGCAAGTACACTCCAGG 672234 37 100.0 38 ..................................... CCGACGATTTTGACTCAAACCAAGCGGTGTATGTCGAG 672309 37 100.0 45 ..................................... TCGTTTTTTGTCGCGCGCACAATCTCACGATACCAACATCATCAA 672391 37 100.0 36 ..................................... CCAGCAGCGATCTTACCTCTGAGCAATACTCGCCGC 672464 37 100.0 36 ..................................... ATGAACTCATCCGAGCGATTCCTGTAGATCTGGCCG 672537 37 100.0 35 ..................................... ACTACTCCTTTGTCTGGAAGATCCAGCATTTACTT 672609 37 100.0 35 ..................................... TGGCGTCATCAGAATAACCAAGAGCTTTCATTAGA 672681 37 100.0 36 ..................................... ATTAAATCCTTATCCAGCCTGGTTAAGCCTTACGAT 672754 37 100.0 37 ..................................... ATCTACTAGCGTCGCTTGCGGCGCAAGTAGATATAGT 672828 37 100.0 34 ..................................... AAGAATTGTAACTCGTATTAATGGGGCAAATCAA 672899 37 100.0 36 ..................................... TCTCGGTTAACGGCGAGATAGTCCTCGCCGTCCCAA 672972 37 100.0 38 ..................................... TCCTACGCCATACGGCTAGCGTGAAAAAAAATGCCGTA 673047 37 100.0 35 ..................................... CGCCTCCCAGTTCTCGTCGTTCCATACTGTCTCAG 673119 37 100.0 36 ..................................... AAGTTCCAGGTACTTCTCCTGTCCCGGTGGAATGAT 673192 37 100.0 35 ..................................... AAAGATGTCATGATCGCATCGGTGATCGGCTCGGT 673264 37 100.0 43 ..................................... ACAGCTTAGCGGTCTTGTTCTGGCCCGACAGCGCCTCCTCCTG 673344 37 100.0 35 ..................................... CCTCATCGGGTACTGGTGAGCAGCCCTCGCATCCT 673416 37 100.0 35 ..................................... GATTTGCCCCTGGGCATATCGGATCACTATCTGAT 673488 37 100.0 35 ..................................... TCACGAACATGTACCGACTGCGGCGCTTCACCCGC 673560 37 100.0 36 ..................................... CGTCATTCACGTTCTCCTACCCGATAATTCCCGGGA 673633 37 100.0 36 ..................................... ATCTCGCTCAATGTCAGAGACGCTCTAGTATCTGGA 673706 37 100.0 35 ..................................... TCGAGGAGGTGAGAGGACGGCTAAACTGCGACGTG 673778 37 100.0 36 ..................................... CCGACTTGATTCAGATGAGAGTCGGATCTTCTGGGA 673851 37 100.0 37 ..................................... TTTGGTTCTGGTGCTGTCATTTTTTTCTCCTCCACGG 673925 37 100.0 37 ..................................... TATTTAGATTTATTTGAAGGCCAGCGGCTCCAGCCAG 673999 37 100.0 37 ..................................... ATGTCTCCGACAACTTGCAACGGATAATCATTACCAA 674073 37 100.0 37 ..................................... TGACCTGGACTAAATTTGACATGTCGAAGGAGGAGGA 674147 37 100.0 34 ..................................... ATCACGGCTAGGTAGCCTAAATACTCCTTTTGGT 674218 37 100.0 37 ..................................... CCTCCAAATACCATATACGCATTATTGGTATATAAAG 674292 37 100.0 35 ..................................... ACCTAATGCAGCGGCTCGACAAAGAAGTGCTCAGG 674364 37 100.0 36 ..................................... GAGCGCAAAGCACGAGATGCCTTCTTCAGGCGGGAG 674437 37 100.0 37 ..................................... TTATGTTCCGGTCCACGTACCGGTATGGTCGTGAAAG 674511 37 100.0 35 ..................................... ACAATCTTCTATTTCGCTGCGCACGCCAGCAACGA 674583 37 100.0 36 ..................................... ACGCGCAGAGGATAACGGAGCTCATGACCGTTCCGA 674656 37 100.0 37 ..................................... CGAATTCTCTGAGCATAAGTGATATCAAAAAAATATA 674730 37 100.0 37 ..................................... TATTTAGATTTATTTGAAGGCCAGCGGCTCCAGCCAG 674804 37 100.0 37 ..................................... ATGTCTCCGACAACTTGCAACGGATAATCATTACCAA 674878 37 100.0 37 ..................................... TGACCTGGACTAAATTTGACATGTCGAAGGAGGAGGA 674952 37 100.0 37 ..................................... CGCCCACAGCGATAGGTTTTCGAATAATGAAAAAGCG 675026 37 100.0 36 ..................................... ACAGAATCTTCGACCATGATCAGGAACTCATTCATT 675099 37 100.0 36 ..................................... GCAATTTTCCAGCATGCATCACAACAGAATCACGAA 675172 37 100.0 37 ..................................... TATGGAGACTTCTGGAAGAAACCCTCTCAACACTCTC 675246 37 100.0 35 ..................................... TCGTCAGGGCATTCGCCAGGCATATGCTGTGTGTC 675318 37 100.0 36 ..................................... TCCGCCTGGCTCCACCTGCGACGGCGACCATTCAGT 675391 37 100.0 35 ..................................... CTTTCTGCTACGATGGGGGGTGTCACGATCCACGT 675463 37 100.0 36 ..................................... TCTCCAGCAGACTTTGCGACAAGCTCTCCAGTCTGC 675536 37 100.0 36 ..................................... TGACACCTTCATTATATAATACAGAGCATAATATGG 675609 37 100.0 35 ..................................... TGTTGAATACTGTAAGAAGAACAATCTCGCATATA 675681 37 100.0 37 ..................................... CGGGATACGTTCAAGCGATCAGCGGATGGAATGAAGC 675755 37 100.0 36 ..................................... TATACAATGAAAGTCTATATGGTAAATAGAGGCCCG 675828 37 100.0 37 ..................................... CGCATAAAATGCGCATGTTCTAAAAATAATCCCAAGC 675902 37 100.0 35 ..................................... ATCTCTGATGCAGGAGGAACGGTCGCAACATCCGG 675974 37 100.0 37 ..................................... CGAACAACTTTAAGATCTGTACGGAACTCGGTCTCAG 676048 37 100.0 36 ..................................... ACTTGACTTTTGTATCCAACCAACACATCTTTCGAT 676121 37 100.0 36 ..................................... ACGATTGATACGAACGTATTCTGAAAGGATGAAGAT 676194 37 100.0 38 ..................................... TCCTTGCAAATCTCCACAGATCGAAGATCGAGGATTGA 676269 37 100.0 34 ..................................... TCCTTATTAGGATGTGTTCAACGCCGTCGGCATT 676340 37 100.0 36 ..................................... CGAACGCTCTGGTCTTTGAGCGCTCGTAACTATTTT 676413 37 100.0 36 ..................................... AAATTCCAGCCCAGGATGGGCTGAAGGCGCTCATCC 676486 37 100.0 37 ..................................... CCCGAATGAATTCACCGTATATGGTACATCGGGAATT 676560 37 100.0 37 ..................................... TCGCATTTAATGTGTATCGTACACACTTGAAGCCGGA 676634 37 100.0 38 ..................................... CTCCTGGGGATACGCCCCATAATATACGTATACGTCAT 676709 37 100.0 36 ..................................... CATCGAGTGGATAAAAAAGACACTCGATGACGAGGG 676782 37 100.0 35 ..................................... TATATTTCCCTCTCGGGAGACTCGGGAGAATTACA 676854 37 100.0 36 ..................................... TGCATCCAGCGCTTCTGCATCATCAAAGCAATTCGA 676927 37 100.0 36 ..................................... ACGCTGCCTTCGATATCATGTCGGCGACATGCTTGT 677000 37 100.0 34 ..................................... TACACAGCCCTGAGCCAGCGGGTCTCGGGGGCTG 677071 37 100.0 37 ..................................... TCGAAAACGTTGTCAGCGTGCCCAGTGAACCTCCAAC 677145 37 100.0 21 ..................................... ACAATTTAGGAAAAAAAAAAA Deletion [677203] 677203 37 100.0 40 ..................................... CGGACACAATCGGGTGGACAAATCTGCTCATTCAGTTCTG 677280 37 100.0 38 ..................................... TATGAATCGGATGCGCGACGCGATAGCATCGCTATCTG 677355 37 100.0 38 ..................................... ATCATACAGACGTGTTGCGTGTTGATTACAGAAACAAG 677430 37 100.0 36 ..................................... CGCCATTCGAAATTCGTGGCGCGGGGGAGCCCTGGA 677503 37 100.0 38 ..................................... TGTCACACAAAACGCGAAATCAATACCGGTATCTACAA 677578 37 100.0 36 ..................................... CTGCGTATCTCCACGCACTGCACGGGTTGTCGAAAT 677651 37 100.0 36 ..................................... CCTCGACAACCTGACCGTTCTTCACTACTGCCTGAA 677724 37 100.0 36 ..................................... GCCCATATCTCTTCGTGATGCTCCGCGGTCCTGCTG 677797 37 100.0 37 ..................................... AGCAGCATCTTTTTTCACCTCATGATATCATTATGAC 677871 37 100.0 38 ..................................... TTTCTATACTGGGGATGTTGTACTTCCTTGCCTTCCTT 677946 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 98 37 100.0 36 GTCGAAGAGCGAGTTCCAGGAAAACAAGGATTGAAAC # Left flank : TTTGGGTGTGCTGGAGAGCTTCATGCGTACAGGTTTGTCACTCCCTGGCTTGCCCTCAACCAGGAGAACTACATGCGCTATGCGGATGCAGCTTCCTGGTATGAGAGGAAAGAGATTCTGAGGAAGATCCTGGTTGGGAACATACTCTCTGCTGCGAAAGGTCTTGGATACACGGTGGATGAGCAGATACGTCTTGAGCTTGGCAGGGTGAGGGATGAGATCTGCATCTTGAAGGGTGTAATGGTCACCGGCATAAAATGCGAGTTCCTGACGAACTTTCACATTCCGGATCTGATGGGTCTGGGGAAGTCTGTCTCAAGGGGCTTTGGGGCTGTGGGGGCTCTGGAGGGCAGGCGAAGAAAGCTTGATGATTGCGGAGATGGAGTTACAGAGAGGAATGAATTTATAAAGGGTTCGATAAATTCCACTCATGCCAGAGACCCCCTCGAAAAGGAGATCTCCAAGGGGAGATCTGCCAAAAAGAACGAAAAATCGCCGCT # Right flank : CGAACGCGCGGCTAAGGCGGCGTCACATCGACCACCTGCCCGGGCCTGTACGCAGGTGTGTGCGACGCGACGACGACCGCGCCGAGTCGGGGGTCAAAAACCGCGATCGCCCCCGCGGGAGAGCCGTGGAGGCGATGAAGGGCGAGACCGTATCTCCAGATCGGCGCCCGCCCCTCCACGACGACAAGCGCACCCCGCGGGATGGGCGGCAGCGGCGGCAGCGGTTCATCCGGCGCGATCGGCGACTCGACCCCGATGTGGTAGAAGACAACGCTCTCCATCAAACCGCCTGCCGTATGTTGAAGACCTGCGCAACCCTCGCGTTCAGCCGCACGTCACCTGCGAGGTACATCTGCGCAAGACTGCGAACATCTTCAGGCTTCACAATGTTGCACTCATAGAGCCTCGATCTGTCCTCCAGATGCTCCTTGATATTACCGGTCTCGGAATCGATCACGTTATCAGAGGTCGTGACAAGATAGGATCGAACACGAAGTGCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGAGCGAGTTCCAGGAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 2 1696036-1700457 **** Predicted by CRISPRDetect 2.4 *** >NC_008553.1 Methanothrix thermoacetophila PT, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1696036 37 100.0 35 ..................................... TGAACGGAGATGTAAGATTTGTGGGGTTCTGCTGG 1696108 37 100.0 38 ..................................... TGCGCTGGATGTCGCGGGAGAGCTCATGGTGGATCTGG 1696183 37 100.0 38 ..................................... TGATCGAGAATTTGACCTCCACGGACCGCTCGGACATC 1696258 37 100.0 37 ..................................... TTCGATGACACGACAATGTGGAGGTGGCACGAAGGAA 1696332 37 100.0 36 ..................................... TAAGATTCTTCAGACGATCTGTGTCATTCGTGATTT 1696405 37 100.0 35 ..................................... CTACCACCGGAGCATGGAGACCGCTTAGAATCAAT 1696477 37 100.0 37 ..................................... TGGAGGATGACCTGGGATATGTTATACGATTCACTGA 1696551 37 100.0 36 ..................................... TAAATGCCACAATTGCGGAGAGGTTTCGAAGTTCGA 1696624 37 100.0 37 ..................................... CGAATCCCGACTGGAGCACTATAAAATTCTGTTCAAT 1696698 37 100.0 38 ..................................... TAACCCTCTTCACCCATGCGCCCATTGCTACCTCGCTC 1696773 37 100.0 37 ..................................... TCAGTTCCCTTTTCATCGGGATTCGCCTTGCAACAAG 1696847 37 100.0 37 ..................................... CTGTCTGTCTTCGCAGTTATCAGCGCAGCATGTGAAC 1696921 37 100.0 39 ..................................... TGTTTTGGAATTCCGACAATGACGGGCACGGTTCAGGAT 1696997 37 100.0 39 ..................................... AGCTCCATCGCGCACAATCCGACTGACCAATGCCTTATC 1697073 37 100.0 39 ..................................... TATTCGTCGGAAACTCAGGACAATTCGAGCATATCTCGA 1697149 37 100.0 36 ..................................... CATTAAAGCAGTCTTGAGATCACCCTTCACAGTCTT 1697222 37 100.0 39 ..................................... CGGAAGGCCAACGGGGAGCCATTCGTCGGCGACGACGAA 1697298 37 100.0 36 ..................................... AACCCCTTGGGAATGGCAAATCTCCAGACCCCAAAA 1697371 37 100.0 41 ..................................... TCTGTAGTAGTCGCTGGAGAATATCACAGGGATCTCGTTGT 1697449 37 100.0 37 ..................................... AACATTCAAAATGGATAAAGCCGGTCCGGAATACATT 1697523 37 100.0 39 ..................................... CAAGAGTTTCCTTGATCTCATCAATAATTTTATACAGTT 1697599 37 100.0 37 ..................................... CTACTGGTGGATCGAAGAATGTTACTCCAACATGCAC 1697673 37 100.0 38 ..................................... AAATACTCCGCATCGTGATAATGAATATCCCCAGATGT 1697748 37 100.0 37 ..................................... CTGGTATGACAAAGGTAACGATTAAATGGGATAAATC 1697822 37 100.0 36 ..................................... TGCGGCGGTTGGTGCAACGGTTACCGGTGGAGTTGT 1697895 37 100.0 37 ..................................... TATTCCATCTAGATCAACCTCATCAAAGTTTTTATTC 1697969 37 100.0 36 ..................................... CAATAAATCCATCGGATGTTATTACGTTCATCTAAA 1698042 37 100.0 37 ..................................... AAATATTTCTCTTCTCATTCAATGATCTCCAAACCCC 1698116 37 100.0 38 ..................................... GGGTATTTCTGGAACGGAAGCCGCTACTCAATTGAGGT 1698191 37 100.0 38 ..................................... TGGATGTTTTGAAGTCAGGAGGTGCGTCAGATCTCGGG 1698266 37 100.0 38 ..................................... TTAACGACTTCCTCAACGGCATCCTGAGCTTTCGCGAT 1698341 37 100.0 38 ..................................... TATTATCTCAAAATCGTAGCGCTGTCCGGCCTGAAGAG 1698416 37 100.0 38 ..................................... CATATGATGTACTCGTGCCTATAGCTGATTACCAGGGT 1698491 37 100.0 39 ..................................... CAGGCGAATTATCTTCATATCTTGCCTCCAAGTTATATA 1698567 37 100.0 38 ..................................... GCAAAAGATATTACGTGCCCGCGGCCGGACATCATAAC 1698642 37 100.0 36 ..................................... TATACATGTCACCGCGCTTTGATTACCGCATACACA 1698715 37 100.0 38 ..................................... TATGATATGATTATGCATATTATTGAGATATACATATA 1698790 37 100.0 37 ..................................... TTGGGCGAGTCTCGAGGCGGAACCCCGCCTCGGAAAA 1698864 37 100.0 40 ..................................... GCATCTCATTTTGCATCAGCTCCTTACAGAGGGAGCTGAT 1698941 37 100.0 36 ..................................... CAATCAGCTCACATACAATTAGAAATCATACAAACA 1699014 37 100.0 35 ..................................... TGATGTGGTATTCCTGAGTACCAGCGGGAGTTGGT 1699086 37 100.0 36 ..................................... TATAACTTTCTAACTCATCTTTGAGATCACTCACCA 1699159 37 100.0 39 ..................................... AATTTAATTTCGTCGAGGATCATATCAACTTTTTCCAAA 1699235 37 100.0 35 ..................................... AAATATCTCGGAGGAGAAAATAAAATCGAAGTGAA 1699307 37 100.0 38 ..................................... TCGACGTAATCCGGACTGCATACCCATGCCATTCGATT 1699382 37 100.0 38 ..................................... AAGACAAGCTCGTTTGATGGATAATCCGCGCCCAGCTC 1699457 37 100.0 38 ..................................... GAGTGAGATGGCTCAGAAGGATTACTATGAGATACTCG 1699532 37 100.0 36 ..................................... TCGAACAACGACTCGCCAGGAGCCGACTTCGCATGG 1699605 37 100.0 38 ..................................... GCATTGCATGAATCGAATTATCCGTATCTGCATCTTTC 1699680 37 100.0 38 ..................................... CTGTCCCCGTTCAAGTATGGTTATCATGGACTCCAGGG 1699755 37 100.0 38 ..................................... GTCCAATATTCATCCCCGCGCGGCTGTACGACAATCCC 1699830 37 100.0 37 ..................................... TCCCGGATTCCGTGGAAGTGCTCCTGCAGGCATAGGT 1699904 37 100.0 39 ..................................... AAAATTTTCAATAAATCCATCTCTGGTCCTTACTCGCAT 1699980 37 100.0 39 ..................................... CGACTCCGGAGGCCGGCATGCTCCAGCCAGCGGAGCAAA 1700056 37 100.0 37 ..................................... CCTGACGCATACTGGTAGTATGCGTCATCTCTATACA 1700130 37 100.0 38 ..................................... ATATTGATGGATTCATGGAAGTACGATGCTGAGAAGGG 1700205 37 100.0 38 ..................................... CTGCTCACGCGGGCATACTTTCTGGCTGGCTCTGAGGT 1700280 37 100.0 35 ..................................... TCGTGATTCCGCCATCCGTAATACTCTTCCTCACA 1700352 37 100.0 32 ..................................... CCGCCCATTGCAGACTTGAATGCGGAGATGAG 1700421 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ========================================= ================== 60 37 100.0 37 GTCGCAACGAGTGAGAAAACCCGATAGGGATTGAAAC # Left flank : TTCAGGCACCCGAGATTCGATTACACTGTTACAAGAAGAAAGGCTGTGCGCATGCAGGCGATCTTGCTCCGTAAAGCGATAACCGGAGAGATGAAGGAGTATCATCCGCTGGAGTTCAAAAAATGAGGCTGGCTGTTACTTACGATATCAGCGATAATCGTATACGTACCAGGGTGTTCAGGATACTTGAAAGTTATGGTGCCTGGAAGCAGTACAGTGTCTTCGAGCTCGAGATCAGCGATGTTCAGCGCCTTGAGATGGAAGCCAAGATCAAATCAGTGATCAAACCAGGGGACAAGGTACGCATATATGAGCTGTGCGAACGCTGTGTTGGTGCCATAGTCGAGATCGGCGAGAAATCCCCTACAAGAAAATCGAACGTGATTTGAGCTTTCCTGAATCTTTTTAAAGGCTGTGTACGCAAGAGGTTCAAGATTTTAAGGTCGAAATCAATGCTCTCAGAAAGCTTTAAGTCGAAAAAGAACCATTTCAGCTATGCC # Right flank : GATAGGGATTGAAACGTAGAAATTCTCACAGAAAGAGCTTTCCGGTGATTGTTATCCTTACCTCCTTCGTCTTGCCCCTTTGTGTTACATCCACCGCCTTGAGTTCTGCCAGAGTTGCGACCTGTCTGGATACGGAGCTTTCAGATATGTTGAGGCGCTTTGCTATATCCATTATGTTTGTCGGCTGATGCTCCTCTACATCTTTCAGAATCCTTAGATACCTTTCATCAAGAGAGGCCTTGATGTTCGGTAGCTCGATCTCCTTGAGGGATCGATCTATATCGCTGAAGTTCGTCGCCTTGTAGATCCTGTCGCTGACGCAGAGGCAGGCGATCGTGAAGGCCAGAAATATCTCCCTCGGACCGCCTGAGAGGTTCACTATGAGTTTGCCCTCTGAGCTCCTGAGCAGGTCTCTGAGGGAGAGCACCATGCCCTCAAAATCCCGGTGATCAACCCTGTGAATCTGAAGATCAATCGAACTGTCGATCTGGATGGATAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAACGAGTGAGAAAACCCGATAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.40,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //