Array 1 142623-140395 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNPO01000008.1 Klebsiella grimontii strain 402620-12 402620-12_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 142622 29 100.0 32 ............................. GTTATGGCCGGTACCGACGAACAGCAAACCGT 142561 29 100.0 32 ............................. TGATAATTATACGTCTAATGAGCCATAAACAG 142500 29 100.0 32 ............................. GTGCGCAATGCGATTCCATCCTCGACCATCTG 142439 29 100.0 32 ............................. GTACCTGGAGACAAAAACGCGGCGTCGCCCCG 142378 29 100.0 33 ............................. GCCGAAACGGGGTCGTTGTACGGTAGCTCCGAC 142316 29 100.0 32 ............................. TGACCGCTACCCTTTTTGAAATAGCGCACGGT 142255 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 142194 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 142133 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 142072 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 142011 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 141950 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 141889 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 141828 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 141767 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 141706 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 141645 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 141584 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 141523 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 141462 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 141401 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 141340 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 141278 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 141217 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 141156 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 141095 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 141034 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 140973 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 140912 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 140851 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 140790 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 140729 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 140668 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 140607 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 140546 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 140485 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 140423 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 109221-110226 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNPO01000003.1 Klebsiella grimontii strain 402620-12 402620-12_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 109221 29 100.0 32 ............................. ATAATAAATGCCCGGCAGCGGGTCGCCGTTGC 109282 29 100.0 32 ............................. CCTCATGTGTCGGGTACAGCTCGCCGATGCGG 109343 29 100.0 32 ............................. GTTATGGCCGGTACCGACGAACAGCAAACCGT 109404 29 100.0 32 ............................. CGTATAGACGTACAGCAGCGCAGCCAGCGCGA 109465 29 100.0 32 ............................. TCTGGGACAACCTCGGCATCTGGTGCTGGCTC 109526 29 100.0 32 ............................. CTTGGCGATCCTGTTCGTGAGGTATTCGGAAG 109587 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 109648 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 109709 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 109770 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 109831 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 109892 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 109953 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 110015 29 100.0 32 ............................. CCGGTACCGCGCACGTCAAATACTGAAGATGG 110076 29 100.0 32 ............................. CCTATGAAGTCAGCAACCTCGGACGGGTCCGC 110137 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 110198 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 17 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //