Array 1 850-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDUD01000074.1 Flavilitoribacter nigricans DSM 23189 = NBRC 102662 contig74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 849 30 100.0 36 .............................. AAGTTTGACGCTTATTTGTTTGGGAGGTCTACGATT 783 30 100.0 35 .............................. TCGATTTCAATAACTGGCACCAGCTGGCCTACCAG 718 30 100.0 38 .............................. ATAACAAAAAATAGGCCGAATTATAAAACCGCAACATC 650 30 100.0 37 .............................. TTGGTTACAATTAAGTACTTACCGCCGCCTAAACTTC 583 30 100.0 37 .............................. TTAGACTGTAGTCGATCACTTCCGGCCGGGGGATCTC 516 30 100.0 37 .............................. ATTGATCAGCTCGACCGGGAAAACCGGAAGATGCGCG 449 30 100.0 36 .............................. TTCGCAGATATAACCAGTATTTTGGCTTCCGATCCG 383 30 100.0 37 .............................. CCGCTTCCCCTTTGGGTGGCCATTCTGAATTGAGAAA 316 30 100.0 36 .............................. AGATTTAGCGATCACCACAAACGACGACATCGACGA 250 30 100.0 37 .............................. TTATTCCACGAAATAAACACAAAGACAATGGCTGTAA 183 30 100.0 37 .............................. GTAAATTTCGCACTGATCTCCGCCTGCCGGCGCACCA 116 30 100.0 35 .............................. AGATGATACGGACGGAAGCCAGTAAGCCACAACAA 51 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 100.0 37 CTCGCAATTGGATCATAGTGGGATTGAAAC # Left flank : TACCCTCGGAAAAAAAGTAAGCTACCGGCACCTCATAAAATTGGAATGCTACAAAATAGTTAAGCATCTTATTGGTGACGACATTTATCAACCCTTTAAAATCTGGTGGTAAAATGTACGTTGTTGCCGTATACGACATCAATGAGCAACGAGTAGGAAAAATGCTGAAACTATGCAGACGCTACCTCAACTGGATACAAAATTCCGTATTTGAAGGAGAGATTAGTCCGGTCAAGCTCAGAGAACTCATTACCGAAGCTGAAAGCATAATGCAGTTACACGAAGACAGTTTAATTATCTTTACCAGCCGAGACCAGCAGTGGCTGAATAAAAAGGTCATTGGTCGAGAACGAATGACTACAGATAATTTTTTATAGAGAGTCGTCGATCTCCAGGAAAAAAGCAGCCATTAGAGATCGACGACTCTTAGAGAATAATTTTTTGATTTTTATTTTCTTAATAAACTGAATTTCAATCTTTAATATATATTTTTGTTGAGG # Right flank : CATGCTTTCATACACCGATTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGCAATTGGATCATAGTGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 22990-19718 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDUD01000075.1 Flavilitoribacter nigricans DSM 23189 = NBRC 102662 contig75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22989 30 100.0 36 .............................. ATGCTTTCATACACCGATTGGAGCATGGTGATGCCA 22923 30 100.0 36 .............................. AAACGAGATCGTCGGTACCATTTCCCTCGGCGTATT 22857 30 100.0 37 .............................. ATTGATTTTACATTGTTGCCTGTCAGCCTATCTAATT 22790 30 100.0 37 .............................. ACGAACTGCAGGCAGGAATCACCTGCAGCCTCACCGT 22723 30 100.0 38 .............................. AGTGTTGCTAACCTGGGCAGCTTCCTAATGCAAAACAG 22655 30 100.0 37 .............................. GTAAATTGCATAATTGTTAAAATTAAACTGTGTATCC 22588 30 100.0 37 .............................. GTTGACGGAGACAGCCTTTATTTGGAAAACGGTGGTG 22521 30 100.0 37 .............................. ACCAGTCATCCAAGCCTACCAAAGAGAACTAGAGATA 22454 30 100.0 37 .............................. CTATATGCATGACCATACGGGTCTTCGCACGACAACC 22387 30 100.0 36 .............................. TCTTCAAAGTATCCAGGCGAAGGCGAAAAGTGAATC 22321 30 100.0 35 .............................. CACACAAACAGTCTCAGGCAACGTGACCACGATTA 22256 30 100.0 35 .............................. TCGAAGAACCGGCAGAATTTACCGGGGAAAACCTG 22191 30 100.0 37 .............................. CTATTTCCGAAGATCGCCAGGAGGAATGGATTACCTG 22124 30 100.0 36 .............................. GTAGACTGATAAGTTCCTTTTTTGAGGGGCTGTTCA 22058 30 100.0 36 .............................. TAAATAGCCTGTCCGATTTTAAACCAATCTGTAACC 21992 30 100.0 36 .............................. TTTTTATTTACGACTAAACGCCCGTTGCGTTCACTT 21926 30 100.0 37 .............................. ATCGAATTACGGTGTTTAAGAACGCGAACGCTGCCGC 21859 30 100.0 36 .............................. TTAGATTTGTCGCAATTGCTGCTCCTTTTTGAATTG 21793 30 100.0 37 .............................. ACGAACAACAGGGCGTTAGGTAATCGGGGGAAACCCC 21726 30 100.0 36 .............................. CTGAAATTGATAAATACGGCAATGTACTCTCTATAA 21660 30 100.0 37 .............................. CAAGTCGGCATTCAAGTACCAGGAAAATGAATACCGG 21593 30 100.0 35 .............................. AGCCTTGCACTCTAAAATCCTTTTTGTGGAAAAAT 21528 30 100.0 36 .............................. CATAGTTATTGCCGTCACGGTCCGGCTGCAGGCCGC 21462 30 100.0 36 .............................. CAAGTACCATCCACACAAGTACCACCATTTTCACAA 21396 30 100.0 34 .............................. CAAGACGATGTGATACTGTCTGGTGGGCTTAGGA 21332 30 100.0 34 .............................. CAAGACGATGTGATACTGTCTGGTGGGCTTAGGA 21268 30 100.0 35 .............................. ATAGGAGTCGTGGTGTAGAGGCTATCCGCTTTCGT 21203 30 100.0 37 .............................. ATAAGGAAATCACCAGGAGCGTCAGCCAGCTTTGAAA 21136 30 100.0 39 .............................. GTGTGTAGGTCCGGAAGGAAGTCTTTGTTTTCCGCTTCG 21067 30 100.0 36 .............................. ATTGCCATCCAAAAGCTTTTTCTTCTGAGTATCAAA 21001 30 100.0 35 .............................. CGGCTTTGATGATCATGTTCGGTATCCACAAGTGT 20936 30 100.0 35 .............................. TTAAATCTCATGCGTGGTCAAAAAAGGCCGACCCC 20871 30 100.0 36 .............................. CGTTTAAGTTATTCTTGGAGGCCCTGCACCGCTTCG 20805 30 100.0 36 .............................. AGAATAGGTATGGCACGAGGTAAAAAAGGCGTCATG 20739 30 100.0 37 .............................. ATATCTACCCCGTTTGCACCTCCGAAGATGTGACCAC 20672 30 100.0 36 .............................. AGGAACGTGGATACGGAGCAAGAACGCTCGACAATT 20606 30 100.0 37 .............................. ATACTTGATTCACTTGATATAGTAAGTGGGCTTATTG 20539 30 100.0 36 .............................. CAAATGGCTAGTAAAAAATCCAAAGTATTAAACCTC 20473 30 100.0 36 .............................. AAAGCAAATTGATAGGATGCTCCAAATGGGTGCATT 20407 30 100.0 35 .............................. TTTTATACGAAAATGGATTTCGATTGCCGGAGATC 20342 30 100.0 37 .............................. ACCGTAAATTCGCCGTACTGATAAATTGCCCGGTTGG 20275 30 100.0 37 .............................. AGCATTGACCATTGCCTTAAATCCTTCCGGATTAGCT 20208 30 100.0 35 .............................. TGGGATGAAACCGTGAAGTATGCGGAAAAGATCGC 20143 30 100.0 36 .............................. CTTTCTCCCACGAAGAAATTGGTGCGCAAAGTACTT 20077 30 100.0 36 .............................. AGATGAAGGCGTGGACGTTTCCAGTGATTTTTCGGG 20011 30 100.0 36 .............................. ATGGTGCCTCCGGATCCACCGGTGATCTGGACTACG 19945 30 100.0 36 .............................. GGGTATTCCCGAACCGGACACCCGTAAAGGCCTGGG 19879 30 100.0 36 .............................. AGTATAAAGCCGGCGGAGGGAAAGAGCAGATGCTCA 19813 30 96.7 36 ................G............. TTTGGTAGGGTAGGTAAGCCACGCTGAACCCCATCC 19747 30 76.7 0 ...............CGA.......AC.TG | ========== ====== ====== ====== ============================== ======================================= ================== 50 30 99.5 36 CTCGCAATTGGATCATAGTGGGATTGAAAC # Left flank : GGAAGCCAGTAAGCCACAACA # Right flank : CAATAAATACCGTATAATAAGGTAATCTTAGATATTTTAAACTGCAAACAACTGCATTAAACTGTATATTACTGCATCAACCTTTTTTTAACTGCAAAAAACTGCTTATTGCGGCTAAAGCAGTCTCAATCTGAGTCGAGATAAAAAATTCAGGATTTACTGCGCATCTAAAAACAAGGAGACAAATACCTCCCATTTGCCCCTAATCAAAATCCTAATTTTAGCAGAAAAGCGCTCCGAAAATCTCTAGGAATGATCTCATACCGAATGAGCGATCAAATGACTAAAATGAGGTTTTTCATCTATTTTGTTCTTTCTACCATAGATTAAAAACCATTTTCAAAAGAGAAATGCCATTTAAAGCCATTTTTACGGCCTCAGGATAAAAAATATAGTCTTTGCTTAAAGATTACTATCTTCAAAAAAATAATTCACTGTAGGACTTTAAAATCAGTTTTCACAATAAGGGAAATTCGAGCAATTGGAGAATTATCGACATG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGCAATTGGATCATAGTGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //