Array 1 1403843-1405020 **** Predicted by CRISPRDetect 2.4 *** >NC_013720.1 Pirellula staleyi DSM 6068, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 1403843 35 100.0 33 ................................... TTGTAGTTCGTACGGTGCTCTAACCAACTGAGG 1403911 35 100.0 34 ................................... GACGTCATACGCGTCGTGAGACGTTGGTACGCCA 1403980 35 100.0 36 ................................... CCAACCCGACTCAGGGAGATTCTGAAGAACGCTAAG 1404051 35 100.0 37 ................................... GCGCACCACCAAACAGATCTCACGAGAGTCGCGCTTA 1404123 35 100.0 34 ................................... TCTGGCTTCTCAGCCGGAGGCGCCTTTGGCTCCT 1404192 35 97.1 35 .........T......................... GCCTCCGTCGGTGAGTTCTTGATGGCGTCATTTTC 1404262 35 97.1 37 .........T......................... AGGAATTGTTTCCGCCGTTCTTCACGAGCTAAACGCT 1404334 35 100.0 35 ................................... TACGTCTCGAATGACCCGTGCGTGAAGTAACGGTG 1404404 35 100.0 35 ................................... CCGCCGCGATCGGAAAGTTCAATCCGTTCACGCCT 1404474 35 100.0 39 ................................... CCGACATCGCTGACATAGTATCGTGCAACTTCCTTACCC 1404548 35 100.0 39 ................................... CGCGGAGCGGCAACCGGGATGTCGATCCCGAGACGATCG 1404622 35 100.0 36 ................................... ACTCGGGTTTGCGAAATCCTCATCGACACTGATTGC 1404693 35 100.0 39 ................................... GAAGGAATGTGCCTACGCGACTACTACACGGAATCGTGC 1404767 35 97.1 36 .........T......................... TGCGTGAAATACCGATGGTACCCCACCGTCACCCGA 1404838 35 97.1 40 .........T......................... TTCCCTTGCAGGAGGCTCACGGCTGTCATTGTTAGGTTTC 1404913 35 100.0 38 ................................... GGACTCCTCGTAACGGTCCTCCATGTCCTCACGGTGCA 1404986 35 82.9 0 .G...........................CTTT.A | ========== ====== ====== ====== =================================== ======================================== ================== 17 35 98.3 36 GTGTGAGAAAGAGGCCCTTCGGGGCCGATTGAGAC # Left flank : AGATTGGAGGGTGTAGGCGGGTCGGATTTTATTTGGCAATCGGGCTCACGTTTTGCTACGATCCAAGGCATCGCGGGGAAGCTGGTTTTTCATCAGCTTTGGGCGATAGGTTTGTTTCGCCACGAGCCCGATATGCAGAGTCAGTCGTGGCTGGTGGTTTTCGGTTTGTTGTAGTTGGAAGGTTGTTTGGAGTATCCAGAGTCGGCGATTCCCAGGTGGATGCGTTTGGATACCTTGGTGAGGGGTGAACTCCTGAGTGTGGCAGCGTTGCGACAGCAGAGCGCAGTCCGAGCGGTAAGGCACGCACAGGGAGCGATCGCTTCTTGCGATTCAATTTGGCGCACGCGCGCAAGTGGGGCGTCGATTTGTGAATCCTGAGAGGTTGATGAGGTGTTGGTATGTACGTAGTCGAGAGGCTAGGTTTGTGAAGATGGTTTGCAACTGTTTACTGCTGAAACACTTGGCACGAATTTGGCGAGATCGTGACGGGTGCGGAAGGG # Right flank : AGCTTGCACCCAGACCAGTAGCAATTCCGTTCGATTCCGAGTACCACAGGAGAACGAAACCCCGCTGCCCAACCCAGGCACGAAACTATGCAGATCTTTCGCGTCCGCGTGCTACTGCGCATCAAAACCGCCACGCGGATGCACGCCCATCACGCTGCCATCTTGTATGCGCTGCTCTGCGAAGCTCACGCCGCTGCACACCAGATCGATCCCTGCATTCCCGATGGGCTCCTCCTCGATGCTCCCGAGCAAGCCAGGCTCATGCTCGCCGCTGGCAGCAAGTATGCCTTCGGCTTCACGCTCCTTGCGCCCACCGAGCGACAAGCCTGCACCGTGGTCGATCATCTCGTGCGTGGTCTGCGCAAGGTGGGACGCGCCAAAACCAAACCTAAGCCCGCTTTGGGTGGCAATTTTGAGGTCGAGCTGGTTGAAGATCTGGTAGCGAAGCAAACCCATCGCACCGGGCATCCACTGCAGCCGATTGCCATTGAGGCCATCAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGAGAAAGAGGCCCTTCGGGGCCGATTGAGAC # Alternate repeat : GTGTGAGAATGAGGCCCTTCGGGGCCGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 1408802-1409836 **** Predicted by CRISPRDetect 2.4 *** >NC_013720.1 Pirellula staleyi DSM 6068, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 1408802 35 100.0 36 ................................... CTCATCGCTGAGCTTCTTCTTCGCGGCGGCCTTTGC 1408873 35 100.0 34 ................................... CAAGAATTCTGCCGAAGTAGTGAGAGTCATCCCA 1408942 35 100.0 37 ................................... AATTGATGATGTCGAGATAGATTGCAAGTGCGCAATC 1409014 35 100.0 36 ................................... AATGCCGCCGTTCTCGTTACGTTCAAAACTGAAGTC 1409085 35 100.0 34 ................................... ACAAGAACCGTACTCCAAACCTTGCCAGTCTTGC 1409154 35 100.0 34 ................................... TTCCGGCCTCCGGCCGGAATCACCGTGGTTTGAC 1409223 35 97.1 34 .........T......................... GTGATCGAGGCAGAGTTAAACGCAGTCCATCCGA 1409292 35 97.1 35 .........T......................... GATGAGGCCATTACCTTCTTTTCTTTGCCTTTTAG A [1409303] 1409363 35 97.1 36 .........T......................... CAGTTCGGTTGCGACGGCGATGGGGTCTTGCCCGAA 1409434 35 100.0 43 ................................... ACCGTCCGCGTTCCATCCCTGTAGGGACAAATCCCCAGCCTCC 1409512 35 97.1 36 .........T......................... CGTCGCTGGCAACGGTGTTCTCTATCTGATTTTCGG 1409583 35 100.0 39 ................................... GCAACAGCGACAGAAGTGATGATGAACAGAACAGCAACC 1409657 35 100.0 40 ................................... CGCACGACTTTGCCTTTTTCGTACAGCTTGTTGATTTGCC 1409732 35 100.0 36 ................................... GTTCTGCATGATCCAGAACAGACTGGAGCAGTGGCG 1409803 34 91.4 0 ..........................A...-T... | ========== ====== ====== ====== =================================== =========================================== ================== 15 35 98.7 36 GTGTGAGAAAGAGGCCCTTCGGGGCCGATTGAGAC # Left flank : CTGGCGATGCGCAAAAATCGGTGTCGCAAATCGTTGGCTAGCCATTCTCGTTTTGCTACGATCCAAGGCATCGCGGGGAAGCTGGTTTTTCATCAGCTTTGGGCGATAGGTTTGTTTCGCCACGAGCCCGATATGCAGAGTCAGTCGTGGCTGGTGGTTTTCGGTTTGTTGTAGTTGGAAGGTTGTTTGGAGTATCCAGAGTCGGCGATTCCCAGGTGGATGCGTTTGGATACCTTGGTGAGGGGTGAACTCCTGAGTGTGGCAGCGTTGCGACAGCAGAGCGCAGTCCGAGCGGTAAGGCACGCACAGGGAGCGATCGCTTCTTGCGATTCAATTTGGCGCACGCGCGCAAGTGGGGCGTCGATTTGTGAATCCTGAGAGGTTGATGAGGTGTTGGTATGTACGTAGTCGAGAGGCTAGGTTTGTGAAGATGGTTTGCAACTGTTTACTGCTGAAACACTTGGCACGAATTTGGCGAGATCGTGACGGGTGCGGAAGGG # Right flank : CGGCTGTTTGATGCAGCTATTTTGTGCCGCGCACTTCGGGTGAAGAATTCACAATTCGGTGTATTGATTTTGGAAAATTGCCGGGCTATCATCCTCGACGCCTACTGCCAAAGGGGTGTATCCATGCTTCTAGAGTGCCGGTTCTTTAGCATCCGATACTCTACTCAACGATCCTCACGCTTTTTGCCGTTGAACTTGCTTCCCAGCGTCTACCTTCGTTAAGTACAGCCCCATGTCCCAGCCAGCTTCGCCGGCGACTGAAATTCCGGTGGAGCTGTTTCGCCAGATTCTGATTTGGCCGTTGCTGATTCATGCCCCTCATGGCGAATCAGCAATGGAATTAATGGATCTTGTAACGGACGAGCTAGAGCGTCACTCGTGGCATTGGAATGATCGATCCGCAGGCCAAAGTGCTTCGCCGCTGAAGGGGCTTCCTTGGTATCAGGACGATCATGACTATTCGGAGATCGTTTACTTCCACTCCTACGTGCGCGACTTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGAGAAAGAGGCCCTTCGGGGCCGATTGAGAC # Alternate repeat : GTGTGAGAATGAGGCCCTTCGGGGCCGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //