Array 1 19316-18688 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NHSE01000023.1 Halorhodospira halophila strain IM9620 scaffold0023, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     19315	    28	 100.0	    32	............................	ATGATTTGCGCTTCCAGGAGGCGCTCCAGCGT	
     19255	    28	 100.0	    32	............................	ACAATTGACGCGCATCGAAGCTCAAACGCCGG	
     19195	    28	 100.0	    32	............................	GTCAAGTTGTGATTGCTTCAGCAACGCTGCCG	
     19135	    28	 100.0	    32	............................	TTGTCGAACGGCATCTTGAAGCCATCCGAGGC	
     19075	    28	 100.0	    32	............................	TTGAAGAATTCGCCACTCTGGTGTGATATGGC	
     19015	    28	 100.0	    32	............................	TTTTCGACGCTCTGGGTGAGCTTGTAGCCGCT	
     18955	    28	 100.0	    32	............................	TAGCGAGCTGGAAGCATTCCTTGAGTTTGAGC	
     18895	    28	 100.0	    32	............................	AAAAAGCCCTCCGGCGGGTTCACAGTGCGATA	
     18835	    28	 100.0	    32	............................	TCATTCACGGCGGTGTTTTCGGTGGCAAGGAG	
     18775	    28	 100.0	    32	............................	GACTGAAGCTGTTGAACCGATGGAAGCGTGGG	
     18715	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
        11	    28	 100.0	    32	GTTCGCTGCCGCGCAGGCAGCTCAGAAA	                                	       

# Left flank :   CACGCTTGGGGGCATTGATGGAAATCGCTTGGTTGCGGGGGGTGCGGGATCACTTGGAGATTGGCCAGATCCAGGCGGTCCCCGCTGGGGCGGCGCATCGCGTCGTCATGCGCATACAGTACAAGACCAACGCCGATCGCCTCCGGCGGCGTCGCATGAAACGCCACAATGAGACCTACGAAGAGGCGACCCGCCACATCCCCGACAGCGTGGTGCGGAAGGTGAAGACCCCCTACGTCAGGGTCCGGAGCCAGAGTTCCGGGCAGGCTTTCAGCCTCTTCATTAAGCATGGTGAATGTCAGCAGACACCGGTGGCCGGAACCTTCAGTACATACGGCCTGAGCCAGGAGGCGACCGTACCGTGGTTTTGACCCTTTTTGCAGAGGTCATCGCAGTCCATTTATTATCAGGGGGTTATAGAGTGCCTGACGAAGAGGGTGGCGATGACCCTGCCGTTTGATTTTCTATGCCAATCATTAAGTTAGCGAAGATCCGCCGTA
# Right flank :  GGCACACTTCGTGACGCTGATACAGAAAATGCGTTCGCCGCCGGGACGCGCCCAACGTCGACGACGACGTGCCGGCGGTCGCCATCCGCGATCGCGCGTGCGCTACGGATGGCTCCGGCGTCGGCGAGCGCCGGGAACACGCGTTCTTCCACCTTACTGCATCTCAAGCACCCGATATGTAGACATCTGATGCCTATTTATACTACTCCGGTAGACAGGTTTAAAAATATGGCGGCCTAGACTTTACTTACTAAGATTTCAGCAAGTATTGTCATGCCCGAGCATATTGGCACTCCGGTTGACGGAAAAACGACTGAATCAAGGCGGGTAGCTTTTGGAGGCGCCAGAGCGCCGAGCGGGCCATGCGCTTCATCTGCTCGATGTTCTGAACCCCGCGGCGGCCGATATCCCGCTTGACGTGGACCCAGACCTGCTCGTCCGGATTGAGCTGCGGGGAGTACGGCGGCAGGAAGAAGAGCTTGAGCACCGGGGTTCGACAC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGCGCAGGCAGCTCAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCGCTGCCGCGCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [36.7-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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