Array 1 66610-67492 **** Predicted by CRISPRDetect 2.4 *** >NZ_FAUS01000008.1 Fusobacterium sp. isolate clos_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 66610 30 100.0 35 .............................. GTAAAAGCTATATAGTTGTATTAAAAGCCACACAA 66675 30 100.0 36 .............................. TAGCCTTCTTCAAATATACCTTGTAGCTTTATAAAA 66741 30 100.0 36 .............................. TCAATACAACAAGATAAAATAATACAAGCTATGTTA 66807 30 100.0 36 .............................. TTGTTAGAATTAGACAAAACGTCAACTGTATCATTC 66873 30 100.0 35 .............................. AAAAAACAAGTGGCAATTAACTGTATATTAAAGCT 66938 30 100.0 37 .............................. GTTGCACAAGCCCAAGGAAACATGGCACAAAATGGAA 67005 30 100.0 37 .............................. GGAACGACCTAATAGAACACATAGGATCAATTTACAA 67072 30 100.0 34 .............................. CTCCTGTAACAATAGCTTCTATATTTAATGCTTA 67136 30 100.0 36 .............................. ATAAGTTTCATAATAAGGAATAGTTAACAAAGCTTG 67202 30 100.0 35 .............................. AATGGTGGCTTTCTAGCTGGCACTAAAATGTACTT 67267 30 100.0 35 .............................. TTTACAAAAGATATATACTTATCAAAAACATCTTG 67332 30 100.0 34 .............................. CACTTAACAAAAACAAAATACCGTTATTTTATTG 67396 30 100.0 37 .............................. AACAATCTAACTTGGTAGAGGTTAAAGTACCACAACT 67463 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 ATTTAAAAACACCTAGTGTTACTATTCAAT # Left flank : CTGGCACATTATATTCATGACATTTATCAGCAATTTTAGAAAGTCCATCAGTGAACGAATCATTCCATAAACCCAATTGATTTTCTCTTAACTTTCCATCTTCAGATACACAAGTTGCCTCAACTATGATAAGTCCTGTTCCACCTTGTGCAACATCTTCATACCATTTTATTAAATCATCTGTGACATATCCATCAGTTCCTACAATTGAAAATCTAACTAATGGCGGTAAAACTATTCTATTTTTTATTTCTATATTCCTTATTTTTAAAGGATCAAACAATGAAGTCATACTTCTCTCCTTCTAATAAAACATTCGGCTTATATTATAGAACATTTTACGAAAAAACTCAATTAAATTTATATGTATTTAGATTTATGTAGGCTTTTTATACATGTATATTCCTAGAAGATAATATTCTAGCATAATTTTTTTTAGAAAAAAAGAAATTTTTCTAAATTTTTACAAATAAAAAAAGACATATCTAAACTATGTCTTA # Right flank : TGGTCATAAAATGGGAGCTCTTAATTTTATTAATCTTTTAAAACTCCCTATTACTAATAAGTATACCACATTTTTTCCAAGTGCGACTAAAAAAATAACTTTTTTAAATAAATTGTCTCTAGTTCCCATAAAATTAGTACTCATATGACATTCTTAAAAATAGAGGTTGGAAAAACTATATTCATGATAGAAATACCTTTTAAAATAGGTTATAATGAAGTGAATCAAAAAATAAAGGAGATACAAAATTGAAAGTTGAACAAAAAACAAAAGCAATTTTTTACATGCTTATATCAGCACTCGGTTTTACTTTAATGAGTGTAGCAGTAAAAGCTATACCTGGAATACCACTTTTTGAAAAAGTATTTCTTCGTAATTTAATTAGTTGTTTAGTAGCAGGATTTTTACTTATCTATCAGAGACGAGGATTTTATGTAAAAAAGGAAAATAGATTTCCAGTATTTGCCAGATCATTTTTAGGATTTCTTGGAGTTATTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAAAACACCTAGTGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [85.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 1192308-1192081 **** Predicted by CRISPRDetect 2.4 *** >NZ_FAUS01000008.1 Fusobacterium sp. isolate clos_1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1192307 30 100.0 34 .............................. TGTATATGGACTATGCAGACGAACTGTCTTATTT 1192243 30 100.0 36 .............................. ACAAACTTCAGCGAAAGAAGTAATAGGAGCAATTAA 1192177 30 100.0 37 .............................. ACTGTGGTGCAAGAGGTTTTTTCAAATTAGATAATTT 1192110 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 ATTTAAAAACACCTTGTGTTACTATTCAAT # Left flank : CACCTGCAAAGTTTGATAGGTTGTCTTTTAATGCTAGTCCTACTCCAATTCCTAATGTTCCAAAGAATGCAAACAAACTATTTTCTTTTACTCCTAAAATTAAAAGACAAATAGTTATAAGAAGAGCATGTAATCCAACATTGATCATAGAACGGAAAAAGCTTCTTAATGATGTATCTACTTTATTTGCAGGAGTATGTTTGTTAAATAATGGAATTAATTTTTTTACAAATTTAATAGTTACAGAATAGATAACTATACAAGCAATCACTTTAAATATAAAGAAAATTGAGTTTGCTGTTATTTCTACTAAGTAACTTTTATCAGTCATCTTTTGAAAAACTTCATAAAAGAAATCTTTAATTGTGTGTGAATGAGTCATCATATTTTCTATCTTATCTTCCTCCTAAAAAAATATACTAAACGTATATATTATACTATTAATTTCAATATAAAGTTTATTTTATTTTTTTATAAGGACATTAATTTTAATTATAAAT # Right flank : GGTCATGAAATGGGAGTTATTGTTTTTGTTAAACTTTTGAAACTCTCTATTATTAGTAATTATACCACATTTTTTCCAAGTAACCAACCAAATAATCCTTATATTCTCTAGGCTACTTTAATAGGCATGTAGAGAATAATTTTAAAATTGAGGTTGGAAAAACTACCATCTTGGATTAACAAAAGAAAATCCTCTTCCAGTCATACAGCCACAGCCTGTTCCTAAAGAAAAATAAGCAAGTTGTTGAGCCAAACTATTATTTTCTATTTCTAGCTGAACTTTATCTCCTAATATTCTAATATTTTTATATTTTTTAGAAACTGGTCCTCTATTTAAAAATTTCACAGATTTAAAAATATTTATATTATCTATTGAGCTATTTGTAAAATAATTATATTTTTTTATAATATTTCTATTTAATTCTTTTAAAAACTCTCGTTCAATAAGATAATCTTTCCAATATCCACCAGTAGTTTTTAAAATTAAAGGGGTAACAGAGA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAAAACACCTTGTGTTACTATTCAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [73.3-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 1197535-1198024 **** Predicted by CRISPRDetect 2.4 *** >NZ_FAUS01000008.1 Fusobacterium sp. isolate clos_1_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1197535 31 100.0 33 ............................... TATAGACAATTACAATTATTATGGATATTTTTT 1197599 31 96.8 35 ..............................A GGAATAAAACTATTTCTTTAAACCTCTCTAACCAC 1197665 31 100.0 34 ............................... CTATAAATTTATCTCTATAAGTCTCCAAAACTGG 1197730 31 100.0 34 ............................... CTTGCAAAACTGCCGTATTCTTGTAAATAACCTC 1197795 31 96.8 36 ..............................A AGTAAAAACACTATTAAATTTCCAAAGTTCAGTCGC 1197862 31 100.0 35 ............................... AGTAAATCGTTTGAACTTTAAAATCTACTTTTAAA 1197928 31 100.0 35 ............................... TGTTTGTCCCTGTTTCTGTACAATTCCACTGCTGG 1197994 31 90.3 0 ....................A.C.......A | ========== ====== ====== ====== =============================== ==================================== ================== 8 31 98.0 35 ATTGAATAGTAACACTAGGTGTTTTTAAATT # Left flank : TCTTTTACAGTTTCTTTTATTGAAGCTACCTCTTCTTTATTAGATGTTGAAGATGGACTACCACAAGCTCCTAAAAATACAATTAATCCAAATACCACTGCAATCACCAAGAACAGTACTTTCTTCATTATATCCTCTCCTTCACATATAATTTTCTGATGTGTTCTTCACAGTATATTTTATTTATTGTAAATTGCTTCAATATGTATAGATATATTATTTTGTTATGATTTTATATTGTTTTTTTGATTGTTATATATTGCTTTTATGATTTGATTGTGTGTATTTGATATTATATATATTAAGATGACTATTGTTCCCAACTCTTAAATTAATCAGTTTTCCAGCTATTTTTTTAAAACATTTCTAGATATAGCTATTATTGAAGGTTATATAATTTTAACTTATTTTGACCACACACTTGGAAAAAATGTGGTATAATGATTAGTAATAGAGAGTTTCAAAATTTCAACAAAAACAAGAACTCCCATTTCATGACC # Right flank : ATACTAAGTATAGAAAAAAGGCTGGATTTCTCCAGCCTTATTTTTGTTCATATACATTTTATTATTTCGTAATCAAACATAACAAATCATAATCATATCATTTATTAATGTTCGTATACATTTATTTCTTAATATTAGCTATTATAAGTGCAATATCATTTCCTGTTACTCCACTTATTCTAGAAGCTTCACCTATAGATAGTGGTCTTATCTCTTCAAGTCCTGATTTAGCTATGTTTGATATTCCTTTTACAGATGAAAAATCAAAATCAGAAGGTATCATCATCTCTTCAAGTTTTTTAAATTTTTCAATTTGTTCATTTTCTCTTTTAATAAAAATATCATACTTAATAATAGTCTCTATTTGGTTTTTTATAAATTCAGGATAATCATTTATCTCTGTTACATAAGCTAATGAATCATAAGTAACTTCTTTTACTTTTAATAGCTCACTTATCTTTATACCTTTTGCAAATTTTTGTGTAGATCCAAGTTTTTCT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATAGTAACACTAGGTGTTTTTAAATT # Alternate repeat : ATTGAATAGTAACACTAGGTGTTTTTAAATA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //