Array 1 70362-72886 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFCY010000013.1 Klebsiella pneumoniae strain 6-82 NODE_13_length_166846_cov_109.980452, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70362 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 70421 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 70482 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 70543 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 70604 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 70665 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 70726 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 70787 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 70848 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 70909 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 70970 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 71031 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 71092 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 71153 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 71214 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 71275 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 71336 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 71397 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 71458 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 71519 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 71580 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 71641 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 71702 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 71763 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 71824 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 71885 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 71946 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 72007 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 72068 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 72129 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 72190 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 72251 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 72312 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 72373 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 72434 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 72495 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 72556 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 72617 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 72678 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 72739 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 72800 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 72858 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 42 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //