Array 1 1025771-1028298 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047271.1 Klebsiella pneumoniae strain N16-03892 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1025771 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 1025832 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 1025893 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAACCC 1025953 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 1026014 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 1026075 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 1026136 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGAAACCCCATAGC 1026197 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 1026258 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 1026319 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 1026380 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 1026441 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 1026502 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 1026563 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 1026624 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 1026685 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 1026746 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 1026807 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 1026868 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 1026930 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 1026991 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 1027052 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 1027113 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 1027174 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 1027236 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 1027297 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 1027358 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 1027419 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 1027480 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 1027541 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 1027602 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 1027663 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 1027724 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 1027785 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 1027846 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 1027907 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 1027968 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 1028029 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 1028090 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 1028151 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 1028212 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1028270 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //