Array 1 870942-871701 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PNHA01000001.1 Gardnerella vaginalis strain UMB0264 .16933_8_45.1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    870942	    28	 100.0	    33	............................	ATTTATAGCATCAAACGACATCTTAAGACTCTT	
    871003	    28	 100.0	    33	............................	TTTTTGCTTTGCCTTTGCTTGCTCCGGAAATCA	
    871064	    28	 100.0	    33	............................	TCATGCAGAGGAGAAACGAAGGCAGGCAGCTTC	
    871125	    28	 100.0	    33	............................	CCACCCAGCAATGGAGTAGCATTATATCAAATA	
    871186	    28	 100.0	    33	............................	CAAATTATGTGCTCAGACTATAAAGACATTTGC	
    871247	    28	 100.0	    33	............................	CAAATTATGTGCTCAGACTATAAAGACATTTGC	
    871308	    28	 100.0	    33	............................	AACAGTGGAGTAGTATTGTATCAAATAATTTGA	
    871369	    28	 100.0	    33	............................	TTCTCCAGTGTCCTTTACATCGGAGTCGTGAAG	
    871430	    28	 100.0	    33	............................	TCGTGTATACAACTTCGCCTCGGTCGAGGTTGA	
    871491	    28	 100.0	    33	............................	CTCCCCCCTTCGGGGGAGGTTTTATATAAAAGA	
    871552	    28	 100.0	    33	............................	CAGTGGCGATGCGCAAAGGGAATTTTATAGCAT	
    871613	    28	 100.0	    33	............................	CTCGTCGGTGTGTTTAAGCTCCGTAAGCATTTT	
    871674	    28	  78.6	     0	...............T.T..T.CA...A	|                                	
==========	======	======	======	============================	=================================	==================
        13	    28	  98.4	    33	GTCTTTCCCGCATACGCGGGGGTGATCC	                                 	       

# Left flank :   CCTTGGTATGAAACTAGAAAGTGGCAGAGAAAGAGACAAACACGATAGCGCTGAAATTATTCGCAGGCTCAAACTCACATCAGTAAAACAAGCACAAGATACTCTCCACAGTTACGGATTCCATACAGACTTATCACTCTTGCTCGAATCCTTTGAAGAAGCCTACGGCATGAACTGGCTCGCTGACTACATGGCACAGCACATGAATGAACTCGACGAACTGTAAAAACAAAAATCTTATTTTGTCTCGACTTAGTAAACAAGTCGAGGCAATTTTCTTTTATCCCTATAAAATTTTTGCTCGTGTTTTGCTTGGCTCTGTGGTTTCTTGTGCGCGTGATTTTCCGTGGCACTGTTTTCATAAAAAGGTTCTAGGGTTCTTCAAAAATTTTTCTTCTCTTTTATGAAAAATTCTTCTAAGAATTTTTCATAAAATCACTCCACACTTTAACCCATTTTTTCTTAAAACTATCCACAGATTTTTCTTCAGAAACATAAAA
# Right flank :  ACAAAAGTGCGTTTATCTAAAAAGAAAAAGGTTAGCTTGTTGTTATTGTTTAGCTAGATTTATCATACGTAATACGCGCAAGTATCAAAACTGTTTCCTTAACGCAACAATTTTGATACACTTGCGCACTATATATATAAATTAGATTTAATACACAAACAAAGTTGTGCAATAAAGCAATATTTGATATCATGAGTTGTAGGAGTCTTCCTGCGTTGAAAGTCGGCTTCATGCCGTCGGTGACTTTCTCATCTTAGGCGTCGTGTGGGCTCCTTTATTTTTGGTTTTCAGCCAGCAATCAATATTTAGAGGCTTGCGCTTTGTATGGTAATTTTCCGAATTTTTATAATGCTCTGTATCATACAGGTCAAGCACAAGAGGAATTTTATTATTATCTAGAAGTAAATTATAGAAATATAAATCACCCTTTTCAAAGACTCTCTGAACTGCCCACAATGCGTAGTCGGTTATTGCTAATAACGGCTCATTTGAGTACGGTT

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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