Array 1 173344-174663 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADDB02000001.1 Fusobacterium nucleatum subsp. polymorphum F0401 supercont2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 173344 29 70.0 7 ...T.T..T...T..AT....-C......A AATAGCT Deletion [173380] 173380 30 96.7 35 ........T..................... ATCTCCACAGGTTTTTTAATGTATTTCTTAATCAT 173445 30 96.7 35 ........T..................... AAGAAATTAGGATAATTATATTTTCCACCTTTTTT 173510 30 96.7 36 ........T..................... ATTCCACTCCTTACCTATTCTTTTCATATTCTTTTG 173576 30 96.7 37 ........T..................... CTGGTAAAGATTATGCTTGTATAAATGGAGAACTTAC 173643 30 96.7 36 ........T..................... TATAGCAGAATGTGTGGAGTTCAATGAAGAAACAAA 173709 30 96.7 36 ........T..................... ATCCTGTATGATAAGACTTACTGCTTCCATATCCTC 173775 30 100.0 36 .............................. CCACTTGTGCTATTTTCTGATTTACTACTTTGAGTA 173841 30 100.0 36 .............................. GTTAATACAACAAAAGGAGTATCTGTAAAAGACTCA 173907 30 100.0 36 .............................. TCTTTATATAGTAAAGAAGATAAAAAAGGAGCAGAA 173973 30 100.0 36 .............................. ATAGGTACTTCAACACTTCCAGCAGCAGATATTATT 174039 30 100.0 35 .............................. CTCAGAAGCAAGAAAATTAGCTTTTGAAATATAAA 174104 30 100.0 36 .............................. GCTAACCACTTCTCACCACTTTCTACACTACCTTTT 174170 30 100.0 36 .............................. TCAGTTAAAGTTCTCCAACTTTTAAAGACTTCTTTA 174236 30 100.0 36 .............................. GCTAACCACTTCTCACCACTTTCTACACTACCTTTT 174302 30 100.0 37 .............................. ATCTTTGGAATTTCTTTGGATAGAGCTGAGTGGTATT 174369 30 100.0 35 .............................. TCATAAACTGTTACATATAACAAGCCTTCACTTCC 174434 30 96.7 37 ........T..................... ATTGTTCTAGTATATTTTATATTAATTCTTATATTGC 174501 30 100.0 37 .............................. GGCTGTGTAGATGATATATTTGTTCTAAAATCTTTAA 174568 30 93.3 36 .......GT..................... AAAAATAGAATATTTTTAAACTTTCTAAAAATACTC 174634 30 80.0 0 ........T......A....A.....TTG. | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 96.2 35 ATGAACTAAAAACTTGAAAAGTTTTGAAAT # Left flank : TATTAAAAATATTTTAGAAGATAAAGAATTTATTTCATTTTCTTTAAAGAATTCATATTAGTTTAGGAGATGAGGAAAATTGAAAAATATAAACTATAATTATGCTTGGGTATTTTATGATGTTTCAGAAAAGAGAGTAAATAAAGTTTTTAAAATATGCAAAAAATATTTATCTCATTTTCAAAAATCTGTTTTTCGTGGAGATATAACTCCCTCTAAATTAATTAGTTTAAGAAGTGAATTGAAAAGCATAATAGTTGGAAATGAAGATTTTGTCTGTATTTTAAAATCAATAAGTCCTGACGTTTTTGGAGAAGAAACTTTGGGAAATCCAACTCCAAATGGAGAAAATATATTTCTATAATTTAAAAATTTTTCCAAGTAATATTCTAAAAAACTATTTAAACTTTCCAAAATATGATTATTTTAGAAAAATTAAGTAAAAAATAGAATTGCTTGGGAAAAACATATAAAAAATACTTGTAATATTGAAAAAAATA # Right flank : TTAAAAAGTATTTAGAAAAATATTAGGTAGATACAAAACAAAATTAAGGTAAATAATTTATGAATTGGTAAAAAAATAAAGAAAAACTGGTAAATTGAATGTATCAATTTTTCCTATGAAGAAGTATTAAAAAGAGAAAAATAACCAAACTCATTTAATTGGAGTCAAATATTATATAACATACTAGTATAGAAGTGAAATATGTTAGAAAGAAAAGAATTATAGATTTGATAAAACAATTAAAAATTGTTGAAACAAGGAGGAAATTATGAAAAAATTTTCTATTCATGGAACAGAAGAGGGAAATACTACCTCAATTAAATTAGACGAAATTGCTATTTTAGCAGATCCAGATACCCTTTTAAAGATAGGGGAATTTATAATAAAAACTGCACATGTGATGAAAGGTTATGAGGTAGATTATAGTCAACTCCAAGATGAAGTTTCAGATTTTGATTATAAAAATAATACAGATATTATTATATATAATCAAGATTATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGAACTAAAAACTTGAAAAGTTTTGAAAT # Alternate repeat : ATGAACTATAAACTTGAAAAGTTTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //