Array 1 10946-8239 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYCO01000034.1 Flavobacterium psychrophilum strain IT02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 10945 46 89.1 30 TGC.G...G..................................... AACCAAGTTCACAAGTACAAGACAAATTAT CT,T [10932,10938] 10866 46 100.0 30 .............................................. AAAACAGAAGTGCAAATTAGCAAGGAAGTA 10790 46 100.0 30 .............................................. TGGTTTGTTCCTTCGGATTTATGAGATGGT 10714 46 100.0 30 .............................................. TAAAGAAGGTACTAACGTACCTGTGGGTTT 10638 46 100.0 30 .............................................. ATATATTTGTACCATAAACAAACAAACTCA 10562 46 100.0 30 .............................................. AAAATAAACCAAGCGTGTCAGACGATTTAG 10486 46 100.0 30 .............................................. ATTGAATTAAAAATGCTTCAAGACACCGCT 10410 46 100.0 30 .............................................. CCAAATGAATAACCAAACAACGTTGAACCT 10334 46 100.0 30 .............................................. CTCACGCCTGAAGTTCTCATAGGCATTAAT 10258 46 100.0 30 .............................................. TTACGAGCCAATTAACAGTAAAAAATACTA 10182 46 100.0 29 .............................................. CCTCATTCCTGCTTCATCTGGATCCATAC 10107 46 100.0 30 .............................................. AATATGCAACTTACGGATTGTTTCTTCGTC 10031 46 100.0 30 .............................................. ATTTGAATTATTATTTCAATCTGAAAGAGT 9955 46 100.0 29 .............................................. AATTTTCTAGTTCCGTTAATGCCTCTTTC 9880 46 100.0 30 .............................................. ATAGTTTAAAAAAAATATTTGCAAAACCAA 9804 46 100.0 30 .............................................. GAAGCGGTGGTTATTCCAGAAGTAAAGCCT 9728 46 100.0 30 .............................................. ATGGAGAGAATTACAAACCACACAAACCAA 9652 46 100.0 30 .............................................. CAACGCCAGCAAGCACAACACCAGCACCAC 9576 46 100.0 29 .............................................. ACGTTCAGAATTTCACAACAGAATTGTTG 9501 46 100.0 30 .............................................. TGACAACGGGATAGAAGCAAATGTTTCTAA 9425 46 100.0 30 .............................................. GAACTTCTAAAAAAAGAAACAGAGTACATC 9349 46 100.0 30 .............................................. TCATTAACCGACACCGTTATATTTCCGCCA 9273 46 100.0 30 .............................................. TGTATGCTAAATACCAATCTGAGGGTTACA 9197 46 100.0 30 .............................................. TAGAGGCTAATGCGTGGCATGGTGCTACAG 9121 46 100.0 30 .............................................. TGACTGGGCAAAAGTAGCCGTAATAGACAC 9045 46 100.0 30 .............................................. TGATTTTCTTGAATATAGTATTTAGCACGT 8969 46 100.0 31 .............................................. GGAACCATATTTGTTATTAAATATGTATCAT 8892 46 100.0 30 .............................................. GCTAATATGTGGCTCCTTAATGGCACACGA 8816 46 100.0 30 .............................................. GCAAACCGAGTTAGAAATCGATTCGATGGT 8740 46 100.0 30 .............................................. GAGTTCTCAGTCATCTGTCTTTTGTCGCCA 8664 46 100.0 30 .............................................. GGCATAAAATGATTTATGAAGTCTATTTGA 8588 46 100.0 30 .............................................. ACGCCTGTCACTATGTCGTCGTATATTTCT 8512 46 100.0 30 .............................................. ATTTCATCTATTTGCCTTAACTCACTATCA 8436 46 100.0 30 .............................................. TTACAAAAGCAGAAGAATCTGATTCTTTAT 8360 46 100.0 30 .............................................. GGTTTGCTTGAGCAGTTCTTCTCTGTGAAC 8284 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 36 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACT # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //