Array 1 888446-890907 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084007.1 Flavonifractor plautii strain NBRC 113805 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 888446 33 100.0 37 ................................. CCGTACTTGTATTTTTAATTACCATTACGGCCTCTGC 888516 33 100.0 34 ................................. AGTAAAGGCAAGGCGGTGATTTTTCACCGCCTCC 888583 33 100.0 36 ................................. ATCCCGTATGCTTGCTATGGGAGATCAAAATGCAAA 888652 33 100.0 33 ................................. CCAAGCGCTGTCCTATCTGTCGTAATGCTAGAA 888718 33 100.0 35 ................................. AGAGATAAGAGGTGAATTAAATATGACCATCATCC 888786 33 100.0 33 ................................. GTCCCGCAGCGCCTCGGGGGTCTTGGCATCGCG 888852 33 100.0 37 ................................. CAAATGATATGAAGCATATACATACACATGCAATTGG 888922 33 100.0 34 ................................. TTAAATTTATCGGGCATATCCTGAAAAGCACCCG 888989 33 100.0 35 ................................. TGTCCGAGTTTGACAGTGAGGATGATGCAAAGGAA 889057 33 100.0 34 ................................. TAGTGTAAGATATTGCACACCCCACTGACAAGCG 889124 33 100.0 34 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAAG 889191 33 100.0 34 ................................. TGCTCTGTGTTCCTTCATAACCCACAGGAAGCAT 889258 33 100.0 34 ................................. TATAAGCCATCTAGCGGCCCTCCTTTACTTAAAA 889325 33 100.0 33 ................................. GTTAAGAGTGGAAAAACTGCTGATTATGCAGGG 889391 33 100.0 33 ................................. AAAAATTATGAAAGTTGTAGCGAATGGGCAGAA 889457 33 100.0 35 ................................. CTGGCCGGGGCATCATAGGTGTTGACGATGTCCAT 889525 33 100.0 34 ................................. TATGACACAATCACCGGGAGGCCCGTCGGCAACC 889592 33 100.0 35 ................................. CATGCGAGACTTTTCATCTTCGCCCAAGGCAAGCA 889660 33 100.0 33 ................................. TTTTGTTGCGCCTTTTGGGCGAATCCTTCGCAA 889726 33 100.0 33 ................................. CATCCGGCGTCCGCCTTGACCGTGCCATCAATC 889792 33 100.0 34 ................................. ATTGTAGAGGTAAAATCAACCCATCCGCCGCCGG 889859 33 100.0 34 ................................. TGTAAGGCCCCTATATCATCTAACCAGCCTATAA 889926 33 100.0 36 ................................. GGAATTAACTCTATCGCCAACTTTTACAGCAAAACT 889995 33 100.0 33 ................................. AGCAGGATATCCACTATCAGACTGCGGGTTATA 890061 33 100.0 35 ................................. CTCCGGCAACCTCTCCTTGACGCTGATCCACTCGC 890129 33 100.0 36 ................................. CATAGGCATCCTCGTTAAATGCTCTACAATTTGTAA 890198 33 100.0 35 ................................. ATCAACACTTTAGTAAGTGCATCCTCAATCTTTGC 890266 33 100.0 37 ................................. GTGTCCCTGGAAATGGATGAGGAGCAGTTAGCCGCCA 890336 33 100.0 34 ................................. TGCCTATTGTATCAATACAATCACACAAGGTTGG 890403 33 100.0 34 ................................. GTCAACAAATACTGTCCCAAATTTATAAATACTA 890470 33 100.0 34 ................................. TCTGTCCACCATGTTAATAACTGTAATTGCTTTT 890537 33 100.0 34 ................................. AGCAAAGGCAAGGCGGTGAAAAATCACCGCCTCC 890604 33 100.0 35 ................................. TGGTTTGTTAATCTTAAATATGCACCTACAGAATC 890672 33 100.0 33 ................................. ACCCTTGGAGTTATAAACACGCTGGTAAACACC 890738 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 890809 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 890876 32 93.9 0 ..............-................C. | ========== ====== ====== ====== ================================= ====================================== ================== 37 33 99.7 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : TGTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //