Array 1 8236-8000 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383885.1 Hugenholtzia roseola DSM 9546 G500DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 8235 36 100.0 30 .................................... ACCTGCCACAAACGATTTGCCTAAGGCAAA 8169 36 100.0 31 .................................... GGGAGCGGCTCGACCCTTATCGCAGCACAGG 8102 36 100.0 31 .................................... CTCCTCTCGTGAGATACGTGCAGCCTCGCGT 8035 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 99.3 31 GCTGTAAAGATACCACATTTGCAACCAATTCACAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCATCACGCTCCTGA # Right flank : TGAGAGTTGAGAATTGAGAGGTTAGGGGTTAGGAAATGGGGCTAATACAAAAAAAAAGAGGGAAAACCTCGGCGACGGCTAAAAGCCTCGCCGACGGTTTAACTTAGCCTGATTACGGTTTGAAACGCGAAGCTGGAGCTTCGCGCTACAGTTAAAAAGCCTCGCCGACGGTTGAACTTAAATTCTAAAAACATTCCGAAAATGTAGGGACAAGGCACTGCCTTGTCCTTGTATTCGCTGTATTTGCGCCCAGTCGTTGGTGAGGACACCAACAACGGCATAGGAGAGAATTAGGAAATAGGGGCTAATACAAAAAAAAGATAAAACCTCGGCGACGGCTAAAAGCCTCGCCGACGGTTGCTTTTAAATTCTAAAAACATTCCGAAAATGTAGGGACAAGGCACTGCCTTGTCCTTATATTTGCCAGTCGTTGGTGAGGACACCAACAACGGCATAGGACACCAACAACGGCGTAGAAAAAGAAAAAAACCTCGGCGACG # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAAAGATACCACATTTGCAACCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 15735-17205 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383885.1 Hugenholtzia roseola DSM 9546 G500DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================= ================== 15735 36 100.0 30 .................................... AAATTGAACATAAGCCTCCAAGTCTGAACC 15801 36 100.0 29 .................................... CATTCAGGCTTATTTGTCCATTTCGGTTG 15866 36 100.0 30 .................................... TAGAACAAATCAACCCCGAAACAGGCGAAA 15932 36 100.0 30 .................................... TAAGACCAGAAATTTCAAAAAACAAGCAAG 15998 36 100.0 29 .................................... TACTTTCTGTTTATGAAAAATGACGAGGA 16063 36 100.0 29 .................................... CGAAAAAGGAAAAAGCGCGTTTTTATGAA 16128 36 100.0 29 .................................... TCAACAATGCAAAGTTACAACCTTTTTGG 16193 36 100.0 30 .................................... CCTACTATGCCCCGATTGAAGCACCACCTA 16259 36 100.0 30 .................................... TTGTTTTCAAAGCAAGTCCGCCCAAGACAA 16325 36 100.0 30 .................................... CAACCGCAAGGCGTGTGCATTTTAGAAAAT 16391 36 100.0 29 .................................... TTCAACACAGTGCAGGCGAAGTTCTATGC 16456 36 100.0 32 .................................... CGTCGTCGTCGTAGTCATCATCTTCGTCGTCG 16524 36 100.0 29 .................................... GATGAACCGCAATTTTGGCAGCGATAAAA 16589 36 100.0 30 .................................... ATTTTTTTTCGGCTTTGTTTTTTGAAAAAG 16655 36 100.0 29 .................................... TACATTATTGTAGCGTCCTCGCCATCAAA 16720 36 100.0 30 .................................... TCAAAACGACCAAGCCAAACGCGCCTGCGA 16786 36 100.0 30 .................................... AAGCCAAACCCTCGATATAATAACGCTTCA 16852 36 100.0 30 .................................... CCTTCGACGACGATTTCAATTTTTTGACCA 16918 36 100.0 31 .................................... TTAAAAACATGAAGGACGAAGGGGTAGTCAA 16985 36 100.0 30 .................................... GAACCTTATTCAAGATAGCATGAGTAACCC 17051 36 100.0 81 .................................... TGGGAGTTGAGAATTGAGAATTAGGAAATGGGGCTAATACAAAAAAAAAGAGGGAAAACCTCGGCGACGGCTAAATGCCTC 17168 36 77.8 0 ..C.ACGGTT.........................A | AA [17180] ========== ====== ====== ====== ==================================== ================================================================================= ================== 22 36 99.0 32 GCTGTAAAGATACCACATTTGCAACCAATTCACAAC # Left flank : TAAGCGTCTTGAAGACGCTTAGGTTTTTTGTTTGTTTCGAAATGCTCGAACAAAAAAAGCACCGTCGGAAACGGTGCTAAGGTATTTAAACCTTCGGAATTACTCCTTACTGTGAAAAGGTCAAAGATGGTATCTTTACAGCGATAAACTTGTGCCTAAAAAAGACGGTCAAATGTGGTACTACAAAGGTAGTTATTTTTTTTGAAAGCACCAAATTTTTTGAAAACTTTTTTCAATTTACCCCCACCCTGCCCTCCCCCCGTTATGGGAGGGTTCGAAATACAAGTTATTTTTTTACATTTATGCAAAAAAATAATGCCGAATCAAAGCCCCTCCCTTTGGGGGCAGGGGTTTGGGGTGGGGTGTATTTAGCCTTTGGTAGGATTAAAAAAATCGACTTTTTTGCGCCATTTGCGCCTCGAAAACCTCATTTTTTTAATCCTATTTTTGCCCAAAAACGCCCTTCTACGCTATGTAGAGCCACTTTTTTGGCACTATCT # Right flank : ATGAGAGTTGAGAATTGAGAGGTTAGGGGTTAGGAAATGGGGCTAATACAAATACGAAATAAATAAAAAACCTCGGCGACGGCTAAATGCCTCGCCGACGGTTTAACTTGTTTGAAGCGCGAAGCTGGAGCTTCGCGCTACAGTTAAAAAGCCTCGCCGACGGTTGCTTTTAAATTCCGATAGCGAAAAATCCGCGTCTGCCGTTGGGGAAGAAGCCTTCTATGAGCAAGCCGCCGCCTGTGTTTTCACGCAGCAGCCCTACTAATTCGGCAGGTGTCGTTACGGGTTTCTTGTCTATGTGGGTGATAACGAAACCTTCGGGAATCTGGGCTTCTTTAAACTTTCCATCTTTCAACTCCTTTACTTTCAGCCCTTTGCGCCCAAATCTTTCTGCTTCGTCATCTGTCAGGGCGGCAACCTCTGCCCCGATATTGGGAATGAAAAGCGAAACGGAAGCGTCATTTTTGATAATTTCGGTTGTGCCGATAGCATTTTTTAGC # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAAAGATACCACATTTGCAACCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 44118-44299 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE383885.1 Hugenholtzia roseola DSM 9546 G500DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================== ================== 44118 34 100.0 40 .................................. TCTGCGGAGGTGACGGCCGTTACCAGTCAGCGCAACGTCG 44192 34 100.0 40 .................................. AAGAATGTAGATTTGAAAAAGGTAAAGTATTTTGCGGTCG 44266 34 97.1 0 .................................N | ========== ====== ====== ====== ================================== ======================================== ================== 3 34 99.0 40 CAATCCTTGTTTTAATGGAAGAGGGTTTTTAAGC # Left flank : CATACAGACGGGTCAGATGTCAGCACTGCTGTGCCTGCTGCATTTCCCCACAGGGGCAAGAAAGCAAGCACAGGGATGCCACTATCGCTGGTCGATAGCCCCTCGGGAGCTTTGTACGCTTTCGCAAAAAGTTCAGGGGTGAGTACCTCCAAGATTTTCTTTTGAGTCGGAGCGTCTCTGTACAAATGTCTATAACCGCCCTGACCGTCTTCCACGAACAAGAACAGTCGCTTCGACGTTTTGAAGGAAGCAGGACTCGTAAACAAGCCTTCTATTTGTCCTCCACTACCAATCCCAAGCAAGAAACGGTCAGGGATTGAAGAGTGGGAAGCTATTTTGACATCCTTTGCGGCACGCACCTTAGCGTCCGCTAAGTTTTCTTTAATTTTCTCACGTAGCTCGGCAGTAAGCATAGGGATTAGTTACTTTGGGGGTTTAGATTCAATCCAACGTGGGAAGAACTTTGCACGGCAAAACGTTGGGATTATAGGGGATAATTA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATCCTTGTTTTAATGGAAGAGGGTTTTTAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //