Array 1 187994-184066 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLFC01000004.1 Klebsiella pneumoniae strain k1989, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187993 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187934 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187873 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187812 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187751 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187690 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187629 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187568 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187507 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187446 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187385 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187324 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187263 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187202 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187141 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187080 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 187019 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186958 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186897 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186836 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186775 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186714 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186653 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186592 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186531 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186470 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186409 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186348 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186287 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186226 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186165 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186104 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186043 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185982 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185921 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185860 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185799 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185738 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185677 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185616 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185555 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185494 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185433 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185372 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185311 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185250 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185189 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185128 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185067 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185006 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184945 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184884 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184823 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184762 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184701 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184640 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184579 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184518 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184457 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184396 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184335 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184274 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184213 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184152 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184094 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //