Array 1 23702-17967 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGNE010000001.1 Halomonas meridiana strain FXH-294 NODE_1_length_179408_cov_173.050560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 23701 28 96.4 32 ...C........................ TGCAACGTCGCAAGGGCAAGAGCGGTTTCTTT 23641 28 96.4 32 ...C........................ CTGGACTCATTCAAGCGATGGATCAAAGACAG 23581 28 96.4 32 ...C........................ ATTCGCGGATTTTGGCCTTGAAAACCGGATGG 23521 28 96.4 32 ...C........................ TGCATCCAGCAGGCGCGACCATTGCGGCTGAT 23461 28 96.4 32 ...C........................ GACCGCAAGTGCTTTATCCGTCCATTGCGACC 23401 28 96.4 32 ...C........................ TCGCCGCTGCGCGGCTGCGGGCCGCACCAACC 23341 28 96.4 32 ...C........................ AGTGGCACCACCGCCAAAGGCGGCGGTGGTGG 23281 28 96.4 32 ...C........................ ACACGGCCAGTTATTACACCCCTTTCCGTGGC 23221 28 96.4 32 ...C........................ GCCTGAGCGGCAATCAGGTTGCCGACCTCCAG 23161 28 96.4 32 ...C........................ ATTGTGGGCGATGAAAGACCCGCTGGACTTCC 23101 28 96.4 32 ...C........................ GCGTCGGTTATCTGGCTGAGCGTGTGCGCGTG 23041 28 96.4 32 ...C........................ TCCCTTATCGTCCAGTCCGGCGAATGGTCACG 22981 28 96.4 32 ...C........................ GGGGCGCGACTTGGAGCCTTCAGCGTTGCCAT 22921 28 96.4 32 ...C........................ ATAGCTGGAACGAGATTGATGGCCAGCCAGTT 22861 28 96.4 32 ...C........................ CAATAGCAATGACTCCCACTCTTCTTGGTCAG 22801 28 96.4 32 ...C........................ CGCAATAGAACGACACAATGATGAAAGCGCCA 22741 28 96.4 32 ...C........................ TGCTCAACAAGAAGGGCTACCGCTATGGTGGC 22681 28 96.4 32 ...C........................ TAACCTTAAACCGGCCTGCTTATTGGCGGTTA 22621 28 96.4 32 ...C........................ ATGAGGTACGCGATAGCACGGCCAGTATTGCT 22561 28 96.4 32 ...C........................ AGACCATGGCGCTTCCGCCGTTGTGTCGTTTT 22501 28 96.4 32 ...C........................ TAACGGCGCTTGCCCCCATAGTATGTCGCGAG 22441 28 96.4 32 ...C........................ TTGTTTAGCTTTGCCCCTTGGTTACGCGCCAT 22381 28 96.4 32 ...C........................ TAAAAACCGCCATTGGCAGCATTGACGAAAAG 22321 28 96.4 32 ...C........................ ATAGATAGTTAACGGCGCGTATCACTGCGCAG 22261 28 96.4 32 ...C........................ ATAAAATTGAACGCCAAAAATAAAGGCTTATT 22201 28 96.4 32 ...C........................ GTAAAAGCGTGGTTCATATTGTTAATGAGCAA 22141 28 96.4 32 ...C........................ ATGAAAAAAGTAAACGCCACTTTCTTTGGCCA 22081 28 96.4 33 ...C........................ GGCATTAGCACGCCCTAGCAGCATAAATCAGAC 22020 28 96.4 32 ...C........................ TCGCCACCGCCTCAGAAGACGCCAGCCAGCGC 21960 28 96.4 32 ...C........................ AGCGGGGCGAGTGCTTTTCCCACCATTCAATA 21900 28 96.4 32 ...C........................ AGCAGCCCCATCACATCTGTCAGGCTGTTGAT 21840 28 96.4 32 ...C........................ AACGCCGGGGCTATCTTCGGGCACAAAAAACC 21780 28 96.4 32 ...C........................ CAGATACGGCGGCTTGCGTGAATGGCCTCACG 21720 28 96.4 32 ...C........................ AACACCAAGCGCAAAAACGCGTAGCCACCAAC 21660 28 96.4 32 ...C........................ TTACCTTTAAACCGGCCTGCACTTTGGCGGTT 21600 28 96.4 32 ...C........................ GGATAATGGCGTCTTCATCGTCGTGTCGTTTT 21540 28 96.4 32 ...C........................ ATAGTATGCCGCAAGGTATAGCCACAAATACA 21480 28 96.4 32 ...C........................ GCTTGGCATTCCGTTGAAGCCATGAGCGTATT 21420 28 96.4 32 ...C........................ GAAAAGGGCACTAAAGCATGGCGAGAGGCAAG 21360 28 96.4 32 ...C........................ TTCCACAGGCGTATGCTTTCGCGGTACGTCGT 21300 28 96.4 32 ...C........................ ATCGACGCCGACGAGCGCAAGCTGCTCGACGC 21240 28 96.4 32 ...C........................ AAAGCCAGCCAGCCCTAGGGTGTCTAGTAGAA 21180 28 100.0 32 ............................ ACCCTTTTCATTCGGGTTGGTGGCCTGGGCGC 21120 28 100.0 32 ............................ AGTGGTGGGCGGGTGCCCGCTCGATCAAGGAC 21060 28 100.0 32 ............................ GCACCCTTCGCAGAGCATTGTTGCTGTCTCCC 21000 28 100.0 32 ............................ TGCAAAGGCATCTTGGTCCACCTCTAGCTCAA 20940 28 100.0 32 ............................ GTAGCGCGGTAGGTGTCCCAATCGTGCAGCTT 20880 28 100.0 33 ............................ CGCGCAGGGCTTTGATAGCGGCGACGTCTTGCA 20819 28 100.0 33 ............................ AGAGAGGCTGGCGACGTAGTTGTACTGGCTCAA 20758 28 100.0 32 ............................ ACATCACCGGCCACCATTTGCGCGTCGTCAGC 20698 28 100.0 32 ............................ AACGGGAAGCCGGGCACCTTTGGCATGGCCTT 20638 28 100.0 32 ............................ TCCGGCTATGGCCGGAGCTGCGGCGGGCGGAG 20578 28 100.0 32 ............................ CTGTCCGTTCTATCCGGCTGGCAGCCCGCCAT 20518 28 100.0 32 ............................ GTTCCACCGTCTCCGCGATTGGGCGGTGGAGC 20458 28 100.0 32 ............................ AGCACGCGGCGCTCATCTGCCGACAGCCGCCC 20398 28 100.0 32 ............................ AAGAAAATCTTGGTCGGGCAGCTTTCCGCCAG 20338 28 100.0 33 ............................ CTCCAGGCCGGGCACAAGCCCGGTCAGCGTGTC 20277 28 100.0 32 ............................ AGAACTGAGCGATATAGGCGCGGGCAATCAAC 20217 28 100.0 32 ............................ AACCACCGCTCCAATATCGTCTTCGCCGTGGG 20157 28 100.0 32 ............................ GTCCGGCCCGTCAAGGGGCCGTGTCCTCGCTC 20097 28 100.0 32 ............................ TCCTGGCGGCGAGCGTTTTCCTGAGTCTGCTG 20037 28 100.0 32 ............................ TGAACGCGACCATCCTTATCTTTGATCTTGTA 19977 28 100.0 32 ............................ ATCAGCATGGATAGGCCACTGGCGGTCTGTCC 19917 28 100.0 32 ............................ CACACGTGAGCAAGCACATCGCCCATGGACCA 19857 28 100.0 32 ............................ CAATCCAGAACCTCGCTTCTGCATCCTCTTGC 19797 28 100.0 32 ............................ TGGCGAATCCTCAATTGAACCGGTTGCAACTG 19737 28 100.0 32 ............................ TTATCCAGCCCTGGCCGACTCATAATAAATCT 19677 28 100.0 32 ............................ CGGTGAAGGAGGGCGCCAAGGAGCGTCTGGGC 19617 28 100.0 32 ............................ AAAGGAGGCAAACCAGAATGGTCATAGACACT 19557 28 100.0 32 ............................ TGGTCAGCATCACCGCCGTTCTGGCATCCGCC 19497 28 100.0 32 ............................ TCGTACAGCTCCTTGGCAAGCCAGCCGAAGCC 19437 28 100.0 32 ............................ ATGCAGCAATTCGTGGAAGGCGTAGCCGAACA 19377 28 100.0 32 ............................ AGCTATCTGGTAGAGAACCAGGCTATTGAACT 19317 28 100.0 32 ............................ ACCGCCGGACACCCGCGAAACCAAGCAACCGA 19257 28 100.0 32 ............................ ATCCAAAAAGGCCAGCTTGTTCGGTGCTCACT 19197 28 100.0 32 ............................ ACCGGCATCGGCGGCGCTGTCGCTGAGTATGT 19137 28 100.0 32 ............................ ACCCGCATCGAGCGCCCAGAACTGCCCGCGAT 19077 28 100.0 32 ............................ GTACACGCGGTAGAGCAGGGCGTCCAACGTTT 19017 28 100.0 32 ............................ GGCTGCCACCGTTGGCCACCCACTCGATGACA 18957 28 100.0 32 ............................ CGAAGGGACGAGACACGCCGGGAGCGAGGGAC 18897 28 100.0 32 ............................ TCAAACGCCTCTAGGCGGGCCGCAAGGGCTTC 18837 28 100.0 32 ............................ TTAGTCAGTGTATTGCGCATATTCCACCCCAC 18777 28 100.0 32 ............................ AATCAAAATGGCCTCAATCTCATACTCAGCCA 18717 28 100.0 35 ............................ TGATGATGATGCCGAGCCCCCCGCCGATCCCCTAC 18654 28 100.0 32 ............................ ACCCACGCCGCACGCTGTGAAGCGTCCGGCAC 18594 28 100.0 32 ............................ AGGTAGAGCCACACGTAAAAGCGCAACGCAAA 18534 28 100.0 32 ............................ TGAAAATTCGGTCGAACGCGGCTTGGTCGATC 18474 28 100.0 32 ............................ GCCATAGAAGATAATCGGAGGTTTTAATATGA 18414 28 100.0 32 ............................ GCTTTCCCACTGCGACTGCTCTGGGACGTTAG 18354 28 100.0 32 ............................ AACACAGAGTTACTTTTCCGTCTTCCATTCTT 18294 28 100.0 32 ............................ ATCTTGAGGTCATGTAATAAGCTCCTCTGGAA 18234 28 100.0 32 ............................ AACCTTGGCATCTACGCCAACTCGCTGTGCTG 18174 28 100.0 32 ............................ ATGGCAGTAAGCTGCGTAGCTGCATCGCCCAT 18114 28 96.4 32 ...C........................ CAGCTCACCCGCTAACAGGCGCTTGGTTGTGG 18054 28 96.4 32 ...C........................ ATGGGCCTGAGCTTCGGCATCAAAGACCTGGA 17994 28 96.4 0 ...C........................ | ========== ====== ====== ====== ============================ =================================== ================== 96 28 98.3 32 GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGCGACTACAGCAGCTGATGGGTATGGATTGGCTGACAGGCATGCGGGATCACACGCAGGTAAGCGCAGTGTTGGAAGTTCCTGCGGGTGCTCAGCATATCAACGTGGCGCGGAAGCAGTTCAACACGGGCAGCGAGAGCCGTGCCAAGCGCTATGCCAAACGGCACAGCATTAGCGAAGAGGAAGCAAGGAGTATTTACGCCAAGGTGGCGGCACGACGAATTGAGCTACCGTTTGTGCAGATCAATAGTCGATCTACTCAACAGCGTTTCAGCCTATTTATTGAACATGGCAAACCTGCAGCGTCTTCATCGGAAGGCTCATTCAGCCATTACGGCTTGAGCCCCAGCGCCACCGTGCCCTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCAGCTAATAATCAATGACTTAGCGGTATTGCTCCTGAAAGGGTAATGCCGCTTTTTTTGGTGAAAGCTCTTTAACAATCAGCACATTAATTTTGATATACTCTA # Right flank : TTGAAATATCCAAGAGTGAATGGGCTTTTCTCTTCATTGTGTCGCGGACCGTTGGGTGCGTGGCCGCGCATCAGAAATTCCGCAACTACTCCTTCTCCTCATCCTCATCCTCATCCTCATCCTCTTCCCAGCGTTCGATGGCGCGTTTGTCGTCGGGGAGTCGCACCATATCGCCCACGTTGAGATTTTGGTGTGACTGAGAGCGGTGGCCGCGTTGGTCGAGAATGGCGGCCACACTGCCAATGCTCACGGCATCTTCTTCGCGGTAGGCTTCTACTTTGACCCGCACAATGCGGCCTTGGTAACGGGCGGAAAGCACGGCACCTGGGTAGGGGGGCGTGTGTTCGGGGTCGTCCTTGAAGAGGGTTGCTACGCTGGCGCTGCCGGGCTCGTCCCATTCAATGTGCTTGTGCATGGTGAGCGTCCTTACTATGGGTGAATAAAAATAAGAAGGCTCGTTAAGTGTAGTGTGCGTTGGCAGAACTCGGCCAATCTAATCA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //