Array 1 26707-24816 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQW010000037.1 Enterobacter cloacae complex sp. I6 contig_0037, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26706 28 100.0 33 ............................ GAAGCCGGTCACGGTGACCATCCCGACGCAGAA 26645 28 100.0 31 ............................ GTCCCGGCATTATTTACGATATGCGTGACCA 26586 28 100.0 32 ............................ CATCCTGGTCGCCATCGTCGGGGACAACATCG 26526 28 100.0 32 ............................ AACGCCGTTGCAGGATAACGGCTCAACGGTTC 26466 28 100.0 32 ............................ AAATTTCGTTAAGCTCCGGGTAGTTGAGCATT 26406 28 100.0 32 ............................ GATGCGATTTGCTGCGCTGAGGTATCGCAGAA 26346 28 100.0 32 ............................ GATATCCAAACAGCCCAGGTCTGAATAAACTG 26286 28 100.0 32 ............................ TAGAGCAGCGTTATTTCACGCTCTCGTTTTCG 26226 28 100.0 32 ............................ ATTGGCTTATTGAATCCGTATGTCTTGCGCAT 26166 28 100.0 32 ............................ TAATTCTTTCGTTCATCCCGACTACGGGATAA 26106 28 100.0 32 ............................ AAGACAGCTTAACATTAGCTAAGACGGCTAAT 26046 28 100.0 32 ............................ TTTTGCGGCGCAGATATGCGTGTGATGAATAC 25986 28 100.0 32 ............................ TTACCAGGACAAAATGCACAAAAACATACTAC 25926 28 100.0 32 ............................ AATGCACCACTCGTACGACCACGACGAAGGGT 25866 28 100.0 32 ............................ TATACAGTTACAGACGCGATAAGAGACGAGCA 25806 28 100.0 32 ............................ TGTATAACTTGCCCCGCGTGCTCGTCGTCAAT 25746 28 100.0 32 ............................ AGCACGCCCTCCAGGTCTCCGATAAGCACATT 25686 28 100.0 32 ............................ GCGTTCGTTATCTGCGCATATTCTGCGGTTGG 25626 28 100.0 32 ............................ ACAACCAAAAACAAGGCGGCAGGATGAACCAA 25566 28 100.0 32 ............................ AGGGAGGAAAGGAGGAGGGGATGGAAACCGAA 25506 28 100.0 32 ............................ GTCGCGCTCAACCATTTTCCGGCGCTGTGCTG 25446 28 100.0 32 ............................ GTACATCTATGATGCGGTATTTGCTCCCCTGC 25386 28 100.0 32 ............................ TGGCGAACCTTGCATCAGAGAAGTCTTTTTAT 25326 28 100.0 32 ............................ GCGTTCGTATGCGCTGGTCGCCTGATAATCAT 25266 28 100.0 33 ............................ TGAACGTGACGCGCACGCGTGGGGGGGACATCT 25205 28 100.0 32 ............................ AGGTTCCGTTGACGTAGTTGTACGTAAGTGCT 25145 28 100.0 32 ............................ GCATAACTTTCGTCGTACGCATCTCGGGAACG 25085 28 100.0 33 ............................ GAAAAAAACAACCCAACCATTAACAACATTGAG 25024 28 96.4 33 .....T...................... GACGATCTGGAAGAAGCGGCAGCCCTCGCTAAT 24963 28 96.4 32 ................A........... TTCAATCGAATTAACCGACAGTACCGGGAGTA 24903 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [24878] 24843 28 71.4 0 ......C.T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 32 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAACAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 26365-28136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQW010000045.1 Enterobacter cloacae complex sp. I6 contig_0045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26365 28 100.0 32 ............................ ACTGGCACCTGCCCCAGCATCCCAAAGATAGG 26425 28 100.0 32 ............................ TGGCGCACAGAGGGCGAGGCGCACGGCTACCG 26485 28 100.0 32 ............................ TGCGCGAAACCAGACCAGCGCACGCGGGACGG 26545 28 100.0 32 ............................ GTCCCGGCGGGGTTAGCCGGGATGGTCGCAGC 26605 28 100.0 32 ............................ AGGGCGATTTCAAACACGCGCTTATTCATCAG 26665 28 100.0 32 ............................ ATGACGCTGGCAACCGCCTTGCCGTTGATCAT 26725 28 100.0 32 ............................ GAACAGGCAGCAGAGCCCGCCCCGCGCGGGCT 26785 28 100.0 32 ............................ GGGGCAGGTTCCAGTAGGCAAGCAGTACGATT 26845 28 100.0 32 ............................ GACGAGCGAAACCGCCGATTTTACGGCGTACA 26905 28 96.4 32 .....A...................... CGCCAGACGTGGGGCGAGCAGGTAAGCGCAAT 26965 28 100.0 32 ............................ TTGTCAGTCTGATGAAAATAAAGGGCCAATGC 27025 28 100.0 32 ............................ AGCATCGAATCCAGCGGCGTGTTAGACGTGGC 27085 28 100.0 32 ............................ TAAGAAGGAGTATTTCCCGCTATACAGCGAAG 27145 28 100.0 32 ............................ GGTGAATATGTCCCGCCACTGGCCGTGGAAGT 27205 28 100.0 32 ............................ TCTTTTTGCTCCTTTTTGTCATCCGTTGACAT 27265 28 100.0 32 ............................ CGCGAGGCCGCCGCAGCTCTTGGGATTAACCC 27325 28 100.0 32 ............................ AGCTGTTCGCCGGTCATTGGTTTATTGGCTGT 27385 28 100.0 33 ............................ GGTTGCAGCATAGTGCTTAAGTGCATCAGTTTT 27446 28 100.0 32 ............................ TCATGGGGGTGGCCTGACAATGCTGAATTTTT 27506 28 100.0 32 ............................ TTGTGAAGCACTATGGCGGTAACTACCAAGGA 27566 28 96.4 33 ....................T....... AAATCGAAGCGAGTGGGAAAAGAACAGTCACAA 27627 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 27687 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 27747 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 27808 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 27868 28 96.4 32 ..........T................. TGCATTGCTTCTGCGTGGATTTGATCGAGGGT 27928 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 27988 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 28048 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 28109 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTTATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATAGCGTTACTGTCCCATAGACAGTACAAGTAAACCCATTCCTCACAAATATTCATCTCGTCTATTTAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //