Array 1 539513-541785 **** Predicted by CRISPRDetect 2.4 *** >NC_011025.1 Mycoplasma arthritidis 158L3-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================= ================== 539513 35 100.0 31 ................................... TATTTAATAGAACAATTAAACCTGATTATAT 539579 35 100.0 31 ................................... TAAATTTGTTATCTAATAATTCAGCGATATT 539645 35 100.0 31 ................................... TTTAACATAATCTTCAATGGGGACAAACTCC 539711 35 100.0 31 ................................... TATGCCATGATGATGTAACCTGTTGGTCTTA 539777 35 100.0 32 ................................... TATTGGGAACAGCAAGAACCATAAAAATGCAC 539844 35 100.0 31 ................................... TAAATATCTACACGCTCTAAGTACTGCTTTA 539910 35 100.0 31 ................................... TTATTTTCAGTTCAAATTTGCTTAATACCTT 539976 35 100.0 32 ................................... TTTAGCGAACTTGGTAGTAAGACTAATAGACT 540043 35 100.0 31 ................................... TAATTCAAAGATGATAACCGTAAAAAATGAG 540109 35 100.0 31 ................................... TATTAACTTTTGTTATGCTGTGAAAACCGTA 540175 35 100.0 32 ................................... TTCTTAACCTTTCAGTTAATTCTGCAATTTTA 540242 35 100.0 31 ................................... TATTTATAATAATTTTCATGCGTAAATTCCT 540308 35 100.0 31 ................................... TTGATAGTATTGTGACATCAATCATGTAATC 540374 35 100.0 31 ................................... TTCATTTTGATTATATACTTGCTTCGGCATA 540440 35 100.0 31 ................................... TTAATGATAATAACGATTATGATCTAGTTGT 540506 35 100.0 31 ................................... TTCAGCCAGAATTGTTTTTTAGTCAATCAGT 540572 35 97.1 31 ..............T.................... TCCAGCCAGCATTACTTTTTAGTCAATCAGT 540638 35 100.0 31 ................................... TTCAGCCAGAATTGTTTTTTAGTCAATCAGT 540704 35 97.1 31 ..............T.................... TCCAGCCAGCATTACTTTTTAGTCAATCAGT 540770 35 100.0 31 ................................... TTGATAAAACCAGTGCAAAATTGATTGGATA 540836 35 100.0 31 ................................... TTCGAAGTTTTCAAAATAAATCGCTCTGCCA 540902 35 100.0 31 ................................... TGGTCACTATAAATAACTTCAATAAAATTTT 540968 35 100.0 32 ................................... TACGAAGCTTTTAAAGAATTGAAATTGATAAA 541035 35 100.0 31 ................................... TCTTTTTCTCTTTTAGCATCGGAAAAAATAA 541101 35 100.0 31 ................................... TATAACTGTCTAAGTGGTGTTCATTAATATG 541167 35 100.0 31 ................................... TTTTCACACTTCTTGTATTGCAGGTGATTTA 541233 35 100.0 31 ................................... CAAAACCAGGCCACTATATTTTTATAAAAAT 541299 35 100.0 31 ................................... CCCAAAGGATTTACAACGGTTTTATATCCTA 541365 35 100.0 33 ................................... CTCTTAATTCTTTTAAACTGTCTGCTTTGTTGA 541433 35 100.0 31 ................................... CAATATATAACCTGGATCATTAACAGGTGAG 541499 35 100.0 31 ................................... CTTTTGCCACAAAACTACAGGAGCTTTTGTT 541565 35 100.0 31 ................................... CTTTTTCATTGCTACTCTAATTGGGTTTGCC 541631 35 100.0 32 ................................... CATTTAGGATTGTATTTTTGAACTGTCCCTAA 541698 35 97.1 16 .................................G. CTTTTGGTTGAAGCAA Deletion [541749] 541749 35 74.3 0 .......A..C.A.T.........T..A..A..TC | A,A [541753,541757] ========== ====== ====== ====== =================================== ================================= ================== 35 35 99.0 31 ACTTTTGGACTGTACAATTTTTATATAGAGTAAAG # Left flank : TTAACTTTAGCGTGCTTGAAAAAATTTGTGAAAATATTAACGAAAATATCGAAGAAGATTTTTTGAGAATCGAAAGCGACTTTAACAAAATGCTAAAAACATTTTTCAAAGTTAATGAAACTTCCTTACTGACAAGAGATCTATTTTTCAAATGGCTAGAAAACTACGACGAAGTTGGCCAAAAAGTAGTTATTCTTAAAAACCTCCCTTGGGTGAAAATAGAAGATCTGGTTCAGTATCTCGATAAATTTGTTTTTATAATACTAACCGATAATTTTTTTGATAATTGCATCAGGTTTGAAGCTTTAGAAACATGTGCTTTTTGAGAAAAAGGTAGACTTGTGTTAGTGCATAGTTTAAATGTAATTATTAACTGAATAGAAAAGAAAATTAATAAAAATATTGACTTGCAAGAGGAAATAAAAAACATATTTAATTCCACTTTTGATGGAGAAAAATTATTTTTTAACTTAAAGAGCGAAGTTTTCTCGTAAAATGGC # Right flank : CTAACTTTTTATATGTTCTTAAACTCATAATTGAAGGGTGATAAAAAACCTTTTATCTATGTTATTAGTAATCCAATCATTTGAGCAATTACAAAAATATGCCAAAAAGGGGCGAAATAGTAAAGCTCGTTTAAATTGCTTGCTTGAAACGAATTATTTGGAAACCTCAAAGTCTTTTAGTTCAATTTTGGGCCAAAAACTAATTGAACACAAAACAATTTCTTCAACTAATAAAAACGAAACTATTTCAATTTCTGAGCAAAAAGAAGATTTAATGTCGCTTAGCGATCTTAAATATAAAACGCTGATATAACAATCATTTCAACTAGTGGAGCTAAACCAATTGCTCTTAAATTACAAGCAGCTTACGATTATTTAGATTATGAGCCTTACAACCACAAAACCGAAGAATTTAAATTAAATACTAGCGTTGCTTGAGACTTTAATAAAATGAAAAAATTTCTTTTACTTCTAAAATAGCAACACATAAACAAGAAAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTTGGACTGTACAATTTTTATATAGAGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //