Array 1 311954-312451 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QQIB01000003.1 Haemophilus haemolyticus strain M26160 M26160_HUY4190A150_cleaned_ctg_3516, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    311954	    32	 100.0	    35	................................	TAGACCAATGTCCCCATTGAAAACCAATCAATTTA 	
    312021	    32	 100.0	    34	................................	TAGTGATTCTTTTAGGTAGCTCTATATAGTCTGC  	
    312087	    32	 100.0	    35	................................	ACCCCCATAATCGTTTTTAATCTAGCTACGCCTTG 	
    312154	    32	 100.0	    36	................................	TAATACTAACAACAATCACATTATCTTTTACTGCAA	
    312222	    32	 100.0	    34	................................	AGCGGTGCCGTTAGCAGTAGCCCAAGTAATGATT  	
    312288	    32	 100.0	    34	................................	CATACATGATGAAATATACTAATTTCTACGTTTG  	
    312354	    32	 100.0	    34	................................	TTTTACATCAATGTAATGGTGAAAGAAAGTCGCT  	
    312420	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
         8	    32	 100.0	    35	GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC	                                    	       

# Left flank :   TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGCGCGCAATATTCAGTATTTGAATGTGATGTCGCGCCTGACCAATGGGTCGCGTTGAAAAACAAACTGTTGGAAACCTACGATCCCACATGTGACAGTCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGTAATAAAGTGGAGCATCATGGGTCAAAACCGTCGGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGATCTTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGGCGATGCGGCCGTTGTACTTACCAAACTCCTTATCATAAAGTCAGTTAGCGAAATACAGTGCTTAATACACTGATTTTTCTTGCTTTTTTATGTAGGGA
# Right flank :  CAGCATTAAGTACTGAACAGTACAACCGTGCGCAAGCTGAAAAGCAAAGGGAAGATGAAATTAAAAAAATCAACTCTAACTTTAAATATGAAATCAAGTAGGTAAATTATGGAAAATTTAATTAGATTATCTTTATTGGCTTTATTCTCTATTACTCTCTTTGCTTGTAATGAAGAAAGTAAGGAAATGACGGTTTATGATTATCTTGTGAATAAACCTTTGCTAGATAGTGATATGCAGAATTGTATTAGTGGAAAAGAAAATAATGTGCATAAGTGCGATATAGTAAAATCTGCTTACAACAAATATAACTTCTTTGAAAAAGGTCTTTATTCAGAAAAAGACTTAAAAGAATTAGGCAAAAAATAACTAATAAAAAGGAGATTGTATGGGTGTTTTTACTTATGTATATAATGATGTGTCTACTGTATTAAGCAGCCGCCTTCGGGCGGCTGTGTGTTGAAACAGTCCAAATATCTCGCTCTTTCCCAAACTTTTAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-4.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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