Array 1 3717-4539 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000011.1 Intestinibacter bartlettii strain N19 No19_ctg011, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3717 30 100.0 35 .............................. CCAGAAGTTCCAGAGGAATATAATCAAATAATATA 3782 30 100.0 36 .............................. AAAAGCAGAAGAACACAGAAGACGAGCAACGCTGAA 3848 30 100.0 35 .............................. GATTCATTTAAATTTGGGAAACTTTTTCGTAATAA 3913 30 100.0 36 .............................. TTATGGAGAAGCTGGTTTAACCAGTGTATTCCATGC 3979 30 100.0 36 .............................. ACGCATACGCAGTAGTTGCTTTAAGCATTAACGGAT 4045 30 100.0 37 .............................. TATTTCTAACTTGCTGAATTGTTATATTAAATCGTTG 4112 30 100.0 37 .............................. ATATTTGTTCTTTTTAACAATAATATTATAACATAGA 4179 30 100.0 36 .............................. TGCCTTAGTTATATCGCTGTCCATTACAGCATCAAA 4245 30 100.0 36 .............................. GTTATGTACAATAAATCCATCACCAGCTCTATAAAT 4311 30 100.0 36 .............................. CCAGGTTTTTATACAGTTAATCGAATGGCTATCTTA 4377 30 100.0 37 .............................. ACCGACCTATTTATATTTTTTTGTTCTACGCTCTTGG 4444 30 100.0 36 .............................. TCATATTGGTGTTTATATCGGGAACGGGCTTGTAAT 4510 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 100.0 36 ATTTAAATACATCCTATGTTACTGTTAAAC # Left flank : ACCTTCTTCAAGTTTGATTTGTTCATCTTTAATTAGTTTTAAATTTGTTTGAATTGCTTTTTCTGTTTGTTCCCTTTTCTTATCTGTTATTTTTGGTTTTTCCAAATCTTTTTTTAGCTTATCTACCTTTTTATTTAGTTTTTCAATACTATTTAATATTAATGTTTCTGCTCCACTATCTACGCTTTTTAATATACTATTAGTATGTATATAACCTATAGATAAATTTAATGCTTTATTTTGTTCCCTTTGTTCTTTTCTCATGAAATCGTAAAATGTTTTATCCTCACATCTTACCTTTATTTTTCTTACTGTAATCATTTTTTATTTCTCCAATATGTTTTATATTTTAAGGGGATGTATTTACCCTAATATTAGGGCGGATGATCTTGTAAGATCTTTTGGAGTGGGTTATTTCACCCTCCAACTATAGACGCCGAATCGCCTACATATTATAGTTATGTTACTGTTAAAGCTGTGTTATCTATTTGAGTTAATGT # Right flank : CCCTTGTAAATTACACATTCTTAAAATTAACAATATAGTATTTCCAATGTATTTAATCAAGTTTTCCAACCATTTATATATTATGGATGTATTTACCCTAGTATTAGGGCGGGTGACTGTAATGCCAATGTTTACAGTCTTTTGGAGTATATAATTCAACTGGAAAAATACCTCCAACTTTGGATGCCGAATCACCCACAATTTCAATTTTAAAATTGATTTATTTATTACCATAATTAGTATATATACTTATTATTCACTTGTCAAATATTTCATTTAAAGTAATAAAAAACCACCAAGCTATACACTTAGTAGTTTTTTTACGTTTATTGTTCTAAATATTTATCAAATATTATAGTTGCTAGTTCTTCCTTTGTTAAAGTATCAATATTAGGTATATCAGACGAATCCATTTCTAATAAAAATTCTCCTAATTTTACTTCAAGATATGACCCATTTTCGTCCGATTTAACTTCCCATCCTTCTAAGTCTGCTACTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCCTATGTTACTGTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 13534-11595 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000023.1 Intestinibacter bartlettii strain N19 No19_ctg023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13533 30 100.0 37 .............................. TTCTTACCTTTGATTTTTTTTTACGTTTGAGCTATCA 13466 30 100.0 37 .............................. AGGGTTATTAAATGAAATGGAAGGGGGCGCAATGTAA 13399 30 100.0 36 .............................. TCTACTCCTTCTATTGCCAGTGCATTTTCTAATGCA 13333 30 100.0 36 .............................. TAACAACAGCCTACAAGAGAACTACAGTCAAAACCG 13267 30 100.0 35 .............................. TCGTAGATATATATTGTCTAGATGAAAATGATGAT 13202 30 100.0 35 .............................. TCCCAATAATAGCCTAAAGGAACATTAGCCCCATT 13137 30 100.0 36 .............................. TCATCTACTGTGTTTAACATTTTGCTAACATCTCGA 13071 30 100.0 36 .............................. TTAATAAATTTATCTTTTTTAGTTTTATGCTTCTCA 13005 30 100.0 36 .............................. AAAGTTTAGGACAAATGATGAATTTAAGGCTAGAGA 12939 30 100.0 36 .............................. TTTATTTCTGCATAAACCATGGTTGTATTTATACTA 12873 30 100.0 36 .............................. TCACGAGTCCATCTTTTTTTCTTATTTATATTGTTT 12807 30 100.0 36 .............................. AGGAGTTAAGGGAGATAAGGGTGATCCTGGAAAAGA 12741 30 100.0 35 .............................. ACGCAATAAAAGCGGGAACTTGTAAGGGGTTCGGA 12676 30 100.0 36 .............................. TTTATTACAAGCGTATCTCCTGTAGCTCCTTCATCA 12610 30 100.0 36 .............................. TCTGTAGGTTGAATTTTAAATGTGTATTTTACTTCC 12544 30 100.0 37 .............................. TTTATTGCATCATAAATAACCCCACAGGAAGTATTAA 12477 30 100.0 38 .............................. TCAGTTAGTATATCGCTAGCTGTTCCCAAATCTGTAGC 12409 30 100.0 36 .............................. GAAGTAAATCCTTTAATAAATCCCCAAATAAATTTA 12343 30 100.0 35 .............................. AAGCTTGAACCTATTCCATTCGCAGTATTTTGAGT 12278 30 100.0 34 .............................. ATGACTCTGATACAAAAGATAATAATCGTTACAT 12214 30 100.0 35 .............................. TATGTTACTGCTTTGTTTCCTAAGTCTTCACCATC 12149 30 100.0 36 .............................. CAGGAAGCAGTGTAAAAGAGATACAATGTTTTAAAA 12083 30 100.0 36 .............................. AAAGTTTAGAACAAGTGATGAATTTAAGGCTAGAGA 12017 30 100.0 37 .............................. TTTTCTTCCTCCTTGCTATATTCTTCTATATCTGCTA 11950 30 100.0 34 .............................. TATGGAACAGCTAATTTCCACCAGTAACGCACAG 11886 30 100.0 36 .............................. ATGTCATTAAGCTTCTCTTTGTGGGCAATGGAAAGC 11820 30 100.0 35 .............................. TATTAGTTATTTTTACAATAACACCTTTTCGTGGA 11755 30 100.0 35 .............................. AAAGCAAGAGAACTTGGAGCTAGTACAACATTTAC 11690 30 100.0 36 .............................. CCAGCTTGATTTGCTTGCATACCAAGTGCTGTTAAA 11624 30 90.0 0 ........................C...CT | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 99.7 36 ATTTAACCGTAACATGAGATGTATTTAAAC # Left flank : GGATTTATGGCGTTGATAATACTTCAGAAATTACCAAAAAAGTTTGGAATATTCTCAAGAATTTTAAAGAAAACGAACTGCATTGTCTTGGATGTCATGGAGTGGTAGTCAATGAAAAAGATAAAAGAATCTTTTGTGATGTTGTTTTAGACTTTTCTTGTGATAGAAGTGAAATAAAAAGTAGATTAGAAAAAACAATCAAAGACAAATTTAATGCATATACAATTACAGTGATAATTGATTCAGAGTTTTCATAGATGATCTGAAATATTTATAAAATCAAACCTAAATTTAAACATACTAAATACTCACTATATATAAATTTTTTCCAACCGCATATTTCTACTCAGTGTACTGTAACATAGTTATTTCAATGGATCAAAGCACTTTTCAGTCCAATATTTATTTTTTTGCACTTCGGTTGGAAAATTTTCTTATAATTATTGGTATTTCAACGTTCATGTGATATTATGTAAATAAGGAATGTGTAAATTACTGGT # Right flank : CAATTTTTAAGTTCGCAATATTTTTAAATTTCGTACTATCCATAGAATGTATCCAACTATCACAAAACTTACTTACAAACACCCTTCTGACAAACACAATACTTACATGCCCCTTCGCCTGTTCTAAGTGGGCAGTAATAAATCACTCTATTATTTTCTTTTATAACCTTTATATTTAATTTATCTATTGGATGCATAGGCATTTCCTTCACATAAGTCAAATATAAACTAGAAATAATAATCCATTTATGATCCTTTTTATCTTCTGCCATATATTTATTTAAATAGTTTTCTAATTCTAACTTCAAATCATTTATAACATCAGTTGAAATTTCTTTATCTTCGGTTATTTGTGTATTTTTCATTTCAAGCAAGTTTTTTCTGTTATGTTCGCTAATTTTAATTGTTGAATCTCTTGCCTCTAATTGTTCCCATTCTTTTGGAGTAATTTGACCTTTTAGTTTAGTTATTAATTGCGATAATTTCATTATTATGATCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACCGTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 11151-11637 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 11151 36 100.0 40 .................................... TGTCATCTATTGTAGGAAATATAAAATCATTCATTGTACT 11227 36 100.0 38 .................................... CGTCGTAGTTGCTGTTTTCTATTGCTTCTATTTCGTCT 11301 36 100.0 41 .................................... TGGTGTTTTATATTCACCGACTGTACCATTTTTGCTGGCTT 11378 36 100.0 36 .................................... ATATTTTTCTGTATTTATATCATCAGTAGGTATACA 11450 36 100.0 42 .................................... TTTCTTTGTGTTTATTTCATAGTCGTCTAATTTAGTTTTTAA 11528 36 97.2 38 ...................T................ CTTCGTCATAATTTTCGTCTTGGCTTTCATCAAATACT 11602 36 83.3 0 ..............AA.....A.....A.C.A.... | ========== ====== ====== ====== ==================================== ========================================== ================== 7 36 97.2 39 GTTTAAGGAGGCCTCGCACCTGAGGGTGATTGAAAC # Left flank : TATTTTAAACCAAATACCCAGAAAAGATAGCACTGCAAATACCCTCTCACGCAATGCCTAAAAAATTAATTAAAAACCACGCCTCCTATATATAGCAAAATTATATTTTTAATTGATATAATATAATTGTATAAATTGCGCTTATAATTATCTGGTCAAAAAGTGTGCCGATTACAAATTTATCATAAATTTTCCAAAATCAAACACATACAACTTTTTATTGTGCTAAAATATAAATATAAAACCCTTAAAACATAAAAATTCATGGATTTTGGCAAAATAAATATTCAAATAAATTTGGATTATAACGAGATAACAACTTAAAAAAATAAAGAAAACATAAAATTTACCTTATAAAAAAATCCAACCGCCACGCACCAGTGATACCAACGGTTTTAGGTGGTTTTGAGGATGTAAAGTTTTTCTTATATGTAAGAAAAAAATTGTACCCCGCAACGGGGGTCTGAAAGCAAGTAATTGCAAGGGCTAAAAATTTAGGG # Right flank : CAACTCACTAATAGAATTAAGAAAGTTGCTATAGTTTATAAATTTATGAATATTTTTTATAAAATCGGATAAAAGATCACAGTCTTTAAAAGAGTCTAGTGATCTTTTTTAGGTAGGTTAAAAACTTGTAATTATATTTGGAATTATATTAGTCAACTGAAATTGCATGATAAAGTTCTTATTATATTTTCCAACCTATGAAATTATAAAAACGTATAGAAAGTAGTTATTGCAATGTATTGGATATTATTTTTGAAAGTATGAAGTTTTTGTTGAAACGGTTGGAAAAATTTTAGAGGAATGTTGAAATTTCAATATTTATTTGATAGTATTAAATTAAGGAATGTGTAAAAAACAGTGGTTTAACAGTAACATGAGATGTATTTAAACATGCTTTATTAGAAATATAGATAAACTTGCAATGCGTTTAACAGTAACATGAGATGTATTTAAACTAGACAGGATCTAGCCAAACATTGAATCCTGGTCTGTTTAACAGT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGGAGGCCTCGCACCTGAGGGTGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 2 11997-13146 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 11997 30 100.0 35 .............................. ATGCTTTATTAGAAATATAGATAAACTTGCAATGC 12062 30 100.0 35 .............................. TAGACAGGATCTAGCCAAACATTGAATCCTGGTCT 12127 30 100.0 36 .............................. CCTTTTATAAATGAACACTACTCTTTTGAAGGAATT 12193 30 100.0 36 .............................. AGAAACTATAGATTACTTGATGAAAATAGAAAAAGA 12259 30 100.0 36 .............................. AAGGTTTATGCAAGTGGTAAAAGCTGTTTATGGAAA 12325 30 100.0 37 .............................. AAAATCTTATGTACATGACCAATATATCACAGATACA 12392 30 100.0 37 .............................. AGTCTCTAAACCTTTCTATTATCCCTAATAGAAGTGG 12459 30 100.0 34 .............................. TCATGTGGTATATATCCTCCAGTTTTTCTAATAG 12523 30 100.0 36 .............................. GAACGATTAGCTGACAGCATGGATGAAACTACTGTA 12589 30 100.0 35 .............................. CTATGACCCACTCGTTCTGAAATTGTCTTTACATG 12654 30 100.0 35 .............................. GATAAATTAGTTTTTTCTATTGTTTTAGTAACCAC 12719 30 100.0 36 .............................. AATCAATACAAAATTTCTACTATAGTAAAGTATTGG 12785 30 100.0 36 .............................. AATCAATACAAAATTTCTACTATAGTAAAGTATTGG 12851 30 100.0 38 .............................. TTTAGCTTATTACTAATGGCCTCTTTTACTCTTGTAAA 12919 30 100.0 37 .............................. TTTATTTCTTTTAATTTTATTTTTAATGTGTTTAATA 12986 30 100.0 36 .............................. CCAGCTTCTAAGTTAGTAAAATTAGTTAAATCTGCT 13052 30 100.0 35 .............................. TCTGTATTATTCTTTATATCTTCTGGTCTTAGTGA 13117 30 80.0 0 ...............A.A..C..C...C.T | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 98.9 36 GTTTAACAGTAACATGAGATGTATTTAAAC # Left flank : TTATTTCATAGTCGTCTAATTTAGTTTTTAAGTTTAAGGAGGCCTCGCACTTGAGGGTGATTGAAACCTTCGTCATAATTTTCGTCTTGGCTTTCATCAAATACTGTTTAAGGAGGCCTAACACCTAAGGGTAACTAAAACAACTCACTAATAGAATTAAGAAAGTTGCTATAGTTTATAAATTTATGAATATTTTTTATAAAATCGGATAAAAGATCACAGTCTTTAAAAGAGTCTAGTGATCTTTTTTAGGTAGGTTAAAAACTTGTAATTATATTTGGAATTATATTAGTCAACTGAAATTGCATGATAAAGTTCTTATTATATTTTCCAACCTATGAAATTATAAAAACGTATAGAAAGTAGTTATTGCAATGTATTGGATATTATTTTTGAAAGTATGAAGTTTTTGTTGAAACGGTTGGAAAAATTTTAGAGGAATGTTGAAATTTCAATATTTATTTGATAGTATTAAATTAAGGAATGTGTAAAAAACAGTG # Right flank : TTAAAAACAAAAAACATACAACTATAACCCAAATATGCAAAACACAAAAAAGGCACTGCACAATTCACATTGTACAATGCCTTATAAAAATTATTTAATTCTCTCACAATTACACCCCCAAACAAAAAACTAACAGCAAGAACTAGAAGTCAAAATACATAAAACCTTTAGCGGACAAATTGCACATTTAATACCCATAAAATCACCTCCTAAAAATTACAACACGACTAAAAATGTATTATGATAGAAATTGCAGAGCCAATCCCTAAACTTAAACTTGACATATAACCACCTCCCACCTTTATCACTAATTATAATTATATAAACTAAACGCCCAACTATCATATCAAAAAGTGTGGTGATTACAAATTTATCCTGAAATTTTCCAAATTGGTCACATACAACTTTTTATTGTGCTAAAATATAAATATAAAACCCTTAAAACATAAAAATTCATGGATTTTAGCAAAATAAATATTCAAATAAATTTGGATTATAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACAGTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 3 13836-14174 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 13836 36 100.0 42 .................................... GTTATTGGTTAGAGAAGGCGGAAAGGTAAACTATACTTTATA 13914 36 100.0 38 .................................... GATTTAACAGTTTCTTCTACTACTTCCATATTTCTTAT 13988 36 100.0 38 .................................... CTCCAATCCTCTGTCGTCTAATTCCATTTCGATTGCTT 14062 36 97.2 41 ..............T..................... ATCATCTTTTTCGCAAGTAGAATTATCTATCTCGTCTTCTA 14139 36 83.3 0 ................T...A...A.GA.C...... | ========== ====== ====== ====== ==================================== ========================================== ================== 5 36 96.1 40 GTTTAAGGAGGCCTCGCACCTAAGGGTGATTGAAAC # Left flank : ATACCCATAAAATCACCTCCTAAAAATTACAACACGACTAAAAATGTATTATGATAGAAATTGCAGAGCCAATCCCTAAACTTAAACTTGACATATAACCACCTCCCACCTTTATCACTAATTATAATTATATAAACTAAACGCCCAACTATCATATCAAAAAGTGTGGTGATTACAAATTTATCCTGAAATTTTCCAAATTGGTCACATACAACTTTTTATTGTGCTAAAATATAAATATAAAACCCTTAAAACATAAAAATTCATGGATTTTAGCAAAATAAATATTCAAATAAATTTGGATTATAACGAGATAACAACTTAAAAAAATAAAGAAAATATAAAATTTACCTTATAAAAAAAATAACCGCCACGCACCAGTGATACCAACGGTTTGAGGTAGTTTTGAGGATGTAAAGTTTTTCTTATATGTAATAAAAAAGTTGTACCCCGCAACGGGGGTCTGAAAGTAAGTAATTGCAAGGGCTAAAAATTTAGGG # Right flank : CAACTCACTAATAGAATTAAGAAGGTTGTTATATTTTATAAATTTATGTATATTTTTTATAAAATCGGATAAAAGATCACAGTACTTAAAAGAGTCTAGTGATCTTTTTTAGGTAGGTTAAAAACTTGTAATTATATTTGGAATTATATTAATCAACTGAAATTGCATGATAAAGTTCTTATTATATTTCCAACCTATGAAATTATAAAAACGTATAGAAAGTAGTTATTGCAATGTATTGGATATTATTTTTGAAAGTATGAAGTTTTTGTTGAAACGGTTGGAAAAATTTTAGAGGAATGTTGAAATTTCAATATTTATTTGATAGTATTAAATTAAGGAATGTGTAAAAAACAGTGGTTTAACAGTAACATGAGATGTATTTAAACCAGGTCTTTTTGGCGACTCTGGTCTGGCTACGGGGGTTTAACAGTAACATGAGATGTATTTAAACTAAACCCACACATAACCTGCATTAACACTTAATTTGTTTAACAGTA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGGAGGCCTCGCACCTAAGGGTGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.30,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 4 14533-15422 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 14533 30 100.0 35 .............................. CAGGTCTTTTTGGCGACTCTGGTCTGGCTACGGGG 14598 30 100.0 35 .............................. TAAACCCACACATAACCTGCATTAACACTTAATTT 14663 30 100.0 38 .............................. TCTCAAATTGTGGTAATACTTTTGTACCATTTATACCA 14731 30 100.0 36 .............................. GCGCATAAAATGTTTAAGGTAAAAATAGGCAAGAAA 14797 30 100.0 35 .............................. CCATTTTTTGCCATTCTTTGTCAGCCACAAAGGAA 14862 30 100.0 36 .............................. GAGTTATACGACATCGAAAGTTCTAGTAAAAATATA 14928 30 100.0 35 .............................. CAAAGTGGACAATCAGCAACACAATAATAGCAACT 14993 30 100.0 36 .............................. TTAACTAACTTAGATTTTCTAGTTATTAATACATCA 15059 30 100.0 38 .............................. GTATATAAAAGTGGTGAAGTAGAAAAAACATATCAAAC 15127 30 100.0 38 .............................. TTGACAGATGTAGATATACCATTATAAGTACTTCCAGC 15195 30 100.0 37 .............................. GCGAAAGATAAAATAAAAGCTGCTGAACTTCTAGGTA 15262 30 100.0 36 .............................. GATTCTTGAGAATTAGTTACTTTTTCTAATTCTTCT 15328 30 100.0 35 .............................. TTTTGAAATCGGATACAATTGCTTCTAAAATAAAA 15393 30 90.0 0 .......................C...C.T | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.3 36 GTTTAACAGTAACATGAGATGTATTTAAAC # Left flank : TCTGTCGTCTAATTCCATTTCGATTGCTTGTTTAAGGAGGCCTTGCACCTAAGGGTGATTGAAACATCATCTTTTTCGCAAGTAGAATTATCTATCTCGTCTTCTAGTTTAAGGAGGCCTCGTACCAAAGAGGAACTGAAACAACTCACTAATAGAATTAAGAAGGTTGTTATATTTTATAAATTTATGTATATTTTTTATAAAATCGGATAAAAGATCACAGTACTTAAAAGAGTCTAGTGATCTTTTTTAGGTAGGTTAAAAACTTGTAATTATATTTGGAATTATATTAATCAACTGAAATTGCATGATAAAGTTCTTATTATATTTCCAACCTATGAAATTATAAAAACGTATAGAAAGTAGTTATTGCAATGTATTGGATATTATTTTTGAAAGTATGAAGTTTTTGTTGAAACGGTTGGAAAAATTTTAGAGGAATGTTGAAATTTCAATATTTATTTGATAGTATTAAATTAAGGAATGTGTAAAAAACAGTG # Right flank : TTAAAAACAAAAAACATACAACCATAACCCAAATATACAAAACACAAAAAAGGCACTGCACAATTCACATTGTACAATGCCTTATAAAAATTATTTAATTCTCTCACAATTACACCTCCCAAACAAAAAACTAGCAGCAAGAACTAGAAGTCAAAATACATAAAACCTTTAGCGGACAAATTGCACATTTAATACCCATAAAATCACCTCCTTAAAATTACAACACGACTAAAAATGTATTATGATAGAAATTGCAGAGCCAATCCCTAAACTTAGACTTGACATATAACCACCTCCCAGCGTTATCACTAATTATAATTGTATAAACTAAACGCCCAACTATCATATCAAAAAGTGTGGTGATTACAAATTTATCCTGAAATTTTCCAAATTGGTCACATACAACTTTTTATTGTGCTAAAATATAAATATAAAACCCTTAAAACATAGAAATTCATGGATTTTAGCAAAATAAATATTCAAATAAATTTGGATTATAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACAGTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 5 16114-16533 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 16114 36 100.0 44 .................................... ATATTTCTTATCTTACCGAATGGTATTATTGGAGTAGCGGGTTA 16194 36 100.0 40 .................................... ATTTTGCCTTCGTCGTCGTATTTAGTTGCTAGTATAACAT 16270 36 100.0 41 .................................... TATGTCTTTAGCTCCTGGCATTAATCCGTCTTGGTATCTAC 16347 36 100.0 36 .................................... GAGTACCTATTTTACTATAATTTGTGCCTGCTCCAC 16419 36 100.0 41 .................................... TCCACAGTTGTTAATTTACCTATAACTGTCACGTCTTTCTT 16496 36 80.6 0 .....................T.A.ACC..A....T | GC [16525] ========== ====== ====== ====== ==================================== ============================================ ================== 6 36 96.8 41 GTTATATAAGGTACCTTCCCTGAGGGGAATTGAAAC # Left flank : TACCCATAAAATCACCTCCTTAAAATTACAACACGACTAAAAATGTATTATGATAGAAATTGCAGAGCCAATCCCTAAACTTAGACTTGACATATAACCACCTCCCAGCGTTATCACTAATTATAATTGTATAAACTAAACGCCCAACTATCATATCAAAAAGTGTGGTGATTACAAATTTATCCTGAAATTTTCCAAATTGGTCACATACAACTTTTTATTGTGCTAAAATATAAATATAAAACCCTTAAAACATAGAAATTCATGGATTTTAGCAAAATAAATATTCAAATAAATTTGGATTATAACGAGATAACAACTTAAGAAATTAAAGAAAATATAAAATTTACCTTATAAAAAAATTCAATCGCCACGCACCAGTGATACCAACGGTTTGAGGTAGTTTTGAGGATGTAAAGTTTTTATTATATGTAAGAAAAAAGTTGTACCCCGCAACGGGGGTCTGAAAGCGAGTAATTGTAAGGGCTAAAAATTTAGGG # Right flank : TAGTCAATCTTTTTTTTATAAGATATATTTTTTATTTTTGGACACGCCAAAAAGACCATAAAAATTATACGAATTTTTTGGTCTGTATTTATTTAAAGTTCATAATTTATTTTAAGCAATTTTATTATTTTCTTTATTTTTCAAATACATTTTTTCATGTAATTTAGGATTTCTTTCTTCATAAGGTTTCTGATTTTTTAAGACAGAAAATATATAATTTAAAAGTTTATGCATTATAGCACATATTTTTACCTTTTTAGGTTTTATATTCATATTATCATGATAATATGAATATAATACAGAATTTAATGGTTTACCTTTACTATTTAATTTTATAGATGCCAAAGCTACTGTATATAATGCCCTTCTTCCGAAGGAAGTTCCTCTTTTTGATATTCTTTTTCCTGTAGATATTGATTTACCAAATTGTTTAACCGATGTATCAAGACCAAAATAGGCGACTAGCTGTTTAGCCTTTTTAAATTTATTTATATTCCCAT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATATAAGGTACCTTCCCTGAGGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 6 18192-18375 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 18192 36 100.0 39 .................................... CCCCACTTAAACACATCTTTATCACCTATTATGTCTATT 18267 36 97.2 37 .......................A............ TGGAAATCCACGTACTCAGCAGAGTAATAGTCTTTCC 18340 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 3 36 99.1 38 GTTTAAGGAGGCCTCACACCTAAGGGTGATTGAAAC # Left flank : ATTTCACCATTCGGTGAGAGTATTGCAACAACTGAAAAATCAGCTGCTACGTCAATACCAACAACCATTTTATTTAAAAATTTAGACATAACAACCTCCTTATTTAAAGTATTCTGAGTAAAACTCCACCTAAATCAGTAAATTTATAACCTTGATAGTTATACAGATAATTTCATAAAAGAAAATCCAACCAGCAAATCATAAAGTTTTACTGGTGGAGGATAGTCTTCAGGACGGGTATAGAATAATATTTATTCACCCAGGGGGATTACATCCATCCATTACTCAGTAAAATGGTACTATATTTTGGGATTTAAATAGAAAATTTAATTGAAGTGATTTAAATTTGAAATGAGTTGTGATAGAATTTAATTAAGATAGATTTTATTCGCAATGTTCGTGATTATTTTAAGATATTTTCTAGTTAAATCCTATATATATTATACAGGGTGATTGAAACATTATAAATGGGTTGGAGTACCATATGTAGTATATGATAA # Right flank : CTAAAGAACGTTTAGTTCCATTTGAATTACTGAATAAGTTATATAAGGTACCTTCCCTGAGGGGAATTGAAACGGAAATGTTGCAAGTGCTGCGAATTGGATATTATATGTTATATAAGGTATCTTCCCTAAGAGGAACTGAGACAACTAACTAATAAAATTAAGAAAGTTGTTATAGTTTATAAATTTATGAATATTTTTTATGAAATAGGATAAAAAATCACAGGATTTAAAAGAGTCTAGTGATTTTTTTTATGTAGGTTAAAAACTTGTAATTATATTTGGAATTATATTAGTCAACTGAAATTGCATGATAAAGTTCTTATTATATTTTACAACCTATGATTATGGATATACTTACATTAAAAACAAAAAACATACAATTATAACTCAAATATGCAAAACACAAAAAAGGCACTGCACAATTAACATTGTACAATGCCTTAAAAAACTATTTAATTCTCTCACAATTACACCTCCCAAACAAAAAACTAGCAGCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGGAGGCCTCACACCTAAGGGTGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 7 27353-28044 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLOQ010000026.1 Intestinibacter bartlettii strain N19 No19_ctg026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 27353 30 96.7 39 ................G............. TTAAAACCTATTTTTTACTTGCAACCTAAGTTCCCAAAG 27422 30 96.7 36 ................G............. GGGCAAATGACGGTATAGATGTAATGGATTTAGATA 27488 30 96.7 37 ................G............. ATATGATATAAATACTTGCTGCTCTACCCTTGGACAA 27555 30 96.7 36 ................G............. ACCAGATAATTGTTATTTAGAAGGAACCGATTGCAT 27621 30 100.0 36 .............................. AAATATTACAAATATATCTAACTGGAAGCAAGCTGG 27687 30 100.0 36 .............................. AATAAGCAATTTTGCTAGTGGTATTATAAATGGATT 27753 30 100.0 35 .............................. TATACATCCATTCTAGTCTGATTGCCTATATAACT 27818 30 100.0 36 .............................. CAGTAATTCCTTTTATATAAGATATAGCTTTTAGCA 27884 30 100.0 35 .............................. ACTGAACTGTAAGTGTCTTGGAATAATGTATCGTA 27949 30 100.0 36 .............................. ATGATTTATATGTTACTATAAGAGTATAGAAGAATA 28015 30 70.0 0 .....C.AA......AT......CCA...A | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 96.1 36 ATTTAACCGTAACATGAGATGTATTTAAAC # Left flank : ACAACAATACACTTAGAAGACGGCACAATAATCGATGGCAAAGAAGTGTGGGATAATTATAAAGAATTACTTAAAAATAACGAAATGGACTACGCCAAAAAGCAAGTAAAACTGTCACAAATAAAAAGCAAGATGAACTATTTTATATACCAAGTAAGATGTAGCGAAAGACCTTGCTACAATGACATTATCGGGGAGATTTACTGCATATTTGACGGCGAAGAATACTTTAAAGAAGGCAAATTAGACAGAGAGAAATTTGAAAATAATATCGGTGAGTTTTTCTAAAAATAGATCATGACTATAGATTATAACTGATGAAATTTTTCCAACCGCATGGTTTTAAATATTACGTTGAAATCTAGTAACTGCAATATGTTGAAGTGAATTTTTGGCGTAAGATTTGTTTTTAGGACTTCGGTTGGAAAAATTTTGCGTAATTGTTGGGATTTCAACGTTTATGTGATATTATATAAATAAGGAATGTGTAAATTACTGGT # Right flank : AAAGGGGTGAGAATATGAAAATAAACGGCACCTTAGTAAACTACTATTTCCACTGCAAGCGACAATGCTATTTATGTGCGAATCGACTAAATTTGGAAGACAACAGCGAGCTTGTTAAGATAGGAAGGGCCAATTCACGAGCAAAAGTCATCGGAGGCTGATAATGCGGAGATAGCGATTGAGAATATAAAGGTGGACAAGATCACAAAGGAGTATCTTACGGAGGTTAAAAAGTCAGATGCTGATATAAATGCGAGCAAGTGGCAGTTATTGTTTTATTTAAAAGTTTTAAAAAGTAAAGGAATAATCAGAAAGGGCAAGCTTGAATGTGTTGAAAAGAAAAAGAGTGATAACAAGATTTATTATTTTGAGCTTACTGATGAGATAGAACAAGAGCTAGAAACTTATATTAACGATATAGAAAAATTAATATCGAATGAAACTATTCCAGATGTGCTTAACAAACCAAAATGTAAAAAATGTGCTTATTATGAATATTG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACCGTAACATGAGATGTATTTAAAC # Alternate repeat : ATTTAACCGTAACATGGGATGTATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //