Array 1 249185-253131 **** Predicted by CRISPRDetect 2.4 ***
>NZ_CABWWA010000015.1 Klebsiella pneumoniae strain ZKP151 isolate ZKP151, whole genome shotgun sequence Array_Orientation: Forward
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
========== ====== ====== ====== ============================= =================================================== ==================
249185 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC
249244 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG
249305 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA
249366 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC
249427 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT
249488 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC
249549 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT
249610 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC
249671 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG
249732 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC
249793 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA
249854 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC
249915 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG
249976 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT
250037 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG
250098 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA
250159 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT
250220 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC
250281 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC
250342 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT
250403 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA
250464 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT
250525 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC
250586 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA
250647 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA
250708 29 96.6 51 ............................T GTCTCTTATACACATCTCCGAGCCCACGAGACTCCGTCTTATCTCGTATGC
250788 29 93.1 32 NN........................... CGGAAATTTTGATTAGTTGAATCTGTGCCATT
250849 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG
250910 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC
250971 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC
251032 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA
251093 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG
251154 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT
251215 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC
251276 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG
251337 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA
251398 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA
251459 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC
251520 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC
251581 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC
251642 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA
251703 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT
251764 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA
251825 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG
251886 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG
251947 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT
252008 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT
252069 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG
252130 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC
252191 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC
252252 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG
252313 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA
252374 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC
252435 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC
252496 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA
252557 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA
252618 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG
252679 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG
252740 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA
252801 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC
252862 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA
252923 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC
252984 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC
253045 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT
253103 29 75.9 0 ...........ATTC...A......G..C |
========== ====== ====== ====== ============================= =================================================== ==================
65 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA
# Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT
# Questionable array : NO Score: 6.21
# Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37
# Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37
# Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41
# AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: F [5.92,0 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
//