Array 1 8136-10296 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHHH010000034.1 Klebsiella pneumoniae strain 2KE 2ke_contig_34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8136 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 8197 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAAACC 8257 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 8318 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 8379 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 8440 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 8501 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 8562 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 8623 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 8684 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 8745 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 8806 29 100.0 32 ............................. GACACCCGTACGCGCCGGGCAGGCGTGGAACT 8867 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 8928 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 8989 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 9051 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 9112 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 9173 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 9234 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 9295 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 9356 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 9417 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 9478 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 9539 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 9600 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 9661 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 9722 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 9783 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 9844 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 9905 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 9966 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 10027 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 10088 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 10149 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 10210 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 10268 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //